Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is solR [H]

Identifier: 238027886

GI number: 238027886

Start: 2552218

End: 2552949

Strand: Reverse

Name: solR [H]

Synonym: bglu_1g23190

Alternate gene names: 238027886

Gene position: 2552949-2552218 (Counterclockwise)

Preceding gene: 238027890

Following gene: 238027885

Centisome position: 65.35

GC content: 62.16

Gene sequence:

>732_bases
TTGACGGAAGGTTTCGATCAACTGGCTGAAAAGATCAGGAAGGTGATTCCGTTCGACAGGTGCCTGATCCTGCACGAGGG
CCGTGGCGATACGCGGCCGCACGGGCTGATTTATCGCTACGGGACGCTCGTCAATCTCGCGGACGCCCGGCGGGGCGTGA
CGCTGTTCGGGTCCACGCTCGACATCGACCGATACCTCGATTGCTTTGCCTTGTCCGACCAGCAGGATCACACGTATCGC
TGGCGCGATCTCGATACCGACAGGTCGTCGCTGCATGCGTCGGAGGCCGATGTCGCATCGTACATGCGCGGGCAGGGCAT
CGTGGCCTGCATCGGTGCCTCGTCTGGCGACCCCGCCGCGATCCGCACGGTGCTGCAGCTGAAATGCGAGGACGAGTCGC
TGCACTCGGCCCTGATCCTGAGTTTCATCGCCATGCATCTGCATGCGGCGCTGACGCAGAAGATCCCGGATCGCAGCCAT
GGCGAGGCGCGAATGCCCGCGGCCGAGACGGATGGTGTGGGAAGCGCCGACGGCGAGGGGTTTCAATTCACCAGGAAGGA
GTCCGAAGTCGTCAAGTGGGTCGTCGAAGGCAAGACTGCTTGGGAAATCGGGCGAATCCTGTGCATGTCGGAGCGCACGG
TCAAGTTTCATCTGACCAACGTATACGAAAAGCTGCGTGTCACCAACCGCGCGCAGGCGGTGGCGAAAGTCAGCCGTCTG
GGCCTGATCTAG

Upstream 100 bases:

>100_bases
GCTGCTGCGCCTGCCGTTGCTCACATGTCACGCATTTTTGTTAGGGGGTCGTCAAGTGACTTTTGCTCGCGTTATCGGCG
ATATTCTTCGCCCCAACGGC

Downstream 100 bases:

>100_bases
GAGAGTCGAGATATGTCGTTCAAGGAAAAGATTGGAGCGTTCGTGGCGCGCCATGGGTTGACGTACAAGGCCTATGTTCT
GTCGATCCTGTTCATGCCGC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTEGFDQLAEKIRKVIPFDRCLILHEGRGDTRPHGLIYRYGTLVNLADARRGVTLFGSTLDIDRYLDCFALSDQQDHTYR
WRDLDTDRSSLHASEADVASYMRGQGIVACIGASSGDPAAIRTVLQLKCEDESLHSALILSFIAMHLHAALTQKIPDRSH
GEARMPAAETDGVGSADGEGFQFTRKESEVVKWVVEGKTAWEIGRILCMSERTVKFHLTNVYEKLRVTNRAQAVAKVSRL
GLI

Sequences:

>Translated_243_residues
MTEGFDQLAEKIRKVIPFDRCLILHEGRGDTRPHGLIYRYGTLVNLADARRGVTLFGSTLDIDRYLDCFALSDQQDHTYR
WRDLDTDRSSLHASEADVASYMRGQGIVACIGASSGDPAAIRTVLQLKCEDESLHSALILSFIAMHLHAALTQKIPDRSH
GEARMPAAETDGVGSADGEGFQFTRKESEVVKWVVEGKTAWEIGRILCMSERTVKFHLTNVYEKLRVTNRAQAVAKVSRL
GLI
>Mature_242_residues
TEGFDQLAEKIRKVIPFDRCLILHEGRGDTRPHGLIYRYGTLVNLADARRGVTLFGSTLDIDRYLDCFALSDQQDHTYRW
RDLDTDRSSLHASEADVASYMRGQGIVACIGASSGDPAAIRTVLQLKCEDESLHSALILSFIAMHLHAALTQKIPDRSHG
EARMPAAETDGVGSADGEGFQFTRKESEVVKWVVEGKTAWEIGRILCMSERTVKFHLTNVYEKLRVTNRAQAVAKVSRLG
LI

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 27077; Mature: 26946

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGFDQLAEKIRKVIPFDRCLILHEGRGDTRPHGLIYRYGTLVNLADARRGVTLFGSTL
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCEEEHHHCCCCEEEECCEE
DIDRYLDCFALSDQQDHTYRWRDLDTDRSSLHASEADVASYMRGQGIVACIGASSGDPAA
CHHHHHHHHCCCCCCCCCEEECCCCCCHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHH
IRTVLQLKCEDESLHSALILSFIAMHLHAALTQKIPDRSHGEARMPAAETDGVGSADGEG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
FQFTRKESEVVKWVVEGKTAWEIGRILCMSERTVKFHLTNVYEKLRVTNRAQAVAKVSRL
CEEECCHHHHHHHHHCCCCHHHHHHEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
GLI
CCC
>Mature Secondary Structure 
TEGFDQLAEKIRKVIPFDRCLILHEGRGDTRPHGLIYRYGTLVNLADARRGVTLFGSTL
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCEEEHHHCCCCEEEECCEE
DIDRYLDCFALSDQQDHTYRWRDLDTDRSSLHASEADVASYMRGQGIVACIGASSGDPAA
CHHHHHHHHCCCCCCCCCEEECCCCCCHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHH
IRTVLQLKCEDESLHSALILSFIAMHLHAALTQKIPDRSHGEARMPAAETDGVGSADGEG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
FQFTRKESEVVKWVVEGKTAWEIGRILCMSERTVKFHLTNVYEKLRVTNRAQAVAKVSRL
CEEECCHHHHHHHHHCCCCHHHHHHEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
GLI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]