| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027876
Identifier: 238027876
GI number: 238027876
Start: 2538521
End: 2539483
Strand: Direct
Name: 238027876
Synonym: bglu_1g23090
Alternate gene names: NA
Gene position: 2538521-2539483 (Clockwise)
Preceding gene: 238027875
Following gene: 238027877
Centisome position: 64.98
GC content: 67.91
Gene sequence:
>963_bases ATGAGCGAGACCACCTACAGCGGGCCGATCGTCGACTCGCATTGCCATATCGCGTCGACGCGCTTCATCCCGACGGCGTT CCTCGACGGCCTGTGCGCGAACGTGCATGCCCGGCTCGCCGCGAACGGCATCCGCAAGTCCCGGGCTGAGCTGCTGGCCG CGTATCTCGACCAGAACCAGGACCACCACGGTGACGCGCTGGTGGCCGACATGACCTCGGGCGGCATCGATCAGGCCGTG GTGCTGCTGCCCGACTTCACCTACGTGATGAAGACCGACCTGACGATCGCCGAGATGTATGCGGAACACCGCGCGATCCT CGCGCGCCACGCGGGGCGGCTTCACGTGTTCGGCGGCATGGATCCGCGCTGGGGCGCGGACGGCGTCGCGCTGTTCGAGC AGGGCGTGGTCGAGTATGGCTTCTCGGGGCTGAAACTGTACCCGCCGTGCGGCTACAGCCCGAGCGACCGCAGGCTCTAC CCGCTCTACGAGATCTGCCGCGCGCACCGGCTGCCGGTGCTGCTGCATATCGGCCCGACCGCCCCGACCCTCGAATTCTC GTATTCGCACCCGGACCTGCTCGACCGCGCGGCGTTCGACTTTCCCGAGGTGAACTTCATCCTCGCGCACGGCGCGGTGC ATCACGTCGACGCCTGCGTGCGCCAATGCGCGTATCGGCCCAACGTGTACCTGGACATCAGCGCGTTTCTCGGCTCCCAG CATCCGCAGGGCTGGCCGGCCGCGCTCGCCGACCTGTTCCGGATGAACCTCAATCACAAGATCCTGTTCGGCACCGACTG GCCGCTGTTTCGCAACTCGGGCGGACACCGCAAGGTGATGAACCAGTTCCTCGCCCGCAGCGGGCCGCTCGCAGCGGTCG CGCCGATGCAGCGCAAGTGGCTGATGGCCGACAATGCGCGCGCGCTGCTGCCGGCCGTGCACACCGCCGATGCGGCCGCA TGA
Upstream 100 bases:
>100_bases CCGGCCGCTTCATGATGCAGCCCGTCGCGGACCTGAAGGCCCGTTCGCTCGGCATGCTGCGCGAGCGCGTGCCGGCACGC GACGCCGAGCGCGCCGCGAG
Downstream 100 bases:
>100_bases CGTGCTGCGGCGCGCGCGCCGGACGGCTCGCGCGCCTCGCCGGCTCACGGCCGCGGCGGCCGCCGCGCTCGCCTGCGCCG CGCTGGCCGCGAGCGGCTGG
Product: Amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSETTYSGPIVDSHCHIASTRFIPTAFLDGLCANVHARLAANGIRKSRAELLAAYLDQNQDHHGDALVADMTSGGIDQAV VLLPDFTYVMKTDLTIAEMYAEHRAILARHAGRLHVFGGMDPRWGADGVALFEQGVVEYGFSGLKLYPPCGYSPSDRRLY PLYEICRAHRLPVLLHIGPTAPTLEFSYSHPDLLDRAAFDFPEVNFILAHGAVHHVDACVRQCAYRPNVYLDISAFLGSQ HPQGWPAALADLFRMNLNHKILFGTDWPLFRNSGGHRKVMNQFLARSGPLAAVAPMQRKWLMADNARALLPAVHTADAAA
Sequences:
>Translated_320_residues MSETTYSGPIVDSHCHIASTRFIPTAFLDGLCANVHARLAANGIRKSRAELLAAYLDQNQDHHGDALVADMTSGGIDQAV VLLPDFTYVMKTDLTIAEMYAEHRAILARHAGRLHVFGGMDPRWGADGVALFEQGVVEYGFSGLKLYPPCGYSPSDRRLY PLYEICRAHRLPVLLHIGPTAPTLEFSYSHPDLLDRAAFDFPEVNFILAHGAVHHVDACVRQCAYRPNVYLDISAFLGSQ HPQGWPAALADLFRMNLNHKILFGTDWPLFRNSGGHRKVMNQFLARSGPLAAVAPMQRKWLMADNARALLPAVHTADAAA >Mature_319_residues SETTYSGPIVDSHCHIASTRFIPTAFLDGLCANVHARLAANGIRKSRAELLAAYLDQNQDHHGDALVADMTSGGIDQAVV LLPDFTYVMKTDLTIAEMYAEHRAILARHAGRLHVFGGMDPRWGADGVALFEQGVVEYGFSGLKLYPPCGYSPSDRRLYP LYEICRAHRLPVLLHIGPTAPTLEFSYSHPDLLDRAAFDFPEVNFILAHGAVHHVDACVRQCAYRPNVYLDISAFLGSQH PQGWPAALADLFRMNLNHKILFGTDWPLFRNSGGHRKVMNQFLARSGPLAAVAPMQRKWLMADNARALLPAVHTADAAA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35265; Mature: 35134
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETTYSGPIVDSHCHIASTRFIPTAFLDGLCANVHARLAANGIRKSRAELLAAYLDQNQ CCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHHGDALVADMTSGGIDQAVVLLPDFTYVMKTDLTIAEMYAEHRAILARHAGRLHVFGGM CCCCCEEEEECCCCCCCCEEEEECCCCEEHCCCCHHHHHHHHHHHHHHHCCCEEEEECCC DPRWGADGVALFEQGVVEYGFSGLKLYPPCGYSPSDRRLYPLYEICRAHRLPVLLHIGPT CCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEECHHHHHHHHCCCCEEEEECCC APTLEFSYSHPDLLDRAAFDFPEVNFILAHGAVHHVDACVRQCAYRPNVYLDISAFLGSQ CCEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEHHHHCCC HPQGWPAALADLFRMNLNHKILFGTDWPLFRNSGGHRKVMNQFLARSGPLAAVAPMQRKW CCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCCCHHHHHHHHHHCCCCCEEECCHHHHE LMADNARALLPAVHTADAAA EECCCCCHHHHHHHHCCCCC >Mature Secondary Structure SETTYSGPIVDSHCHIASTRFIPTAFLDGLCANVHARLAANGIRKSRAELLAAYLDQNQ CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHHGDALVADMTSGGIDQAVVLLPDFTYVMKTDLTIAEMYAEHRAILARHAGRLHVFGGM CCCCCEEEEECCCCCCCCEEEEECCCCEEHCCCCHHHHHHHHHHHHHHHCCCEEEEECCC DPRWGADGVALFEQGVVEYGFSGLKLYPPCGYSPSDRRLYPLYEICRAHRLPVLLHIGPT CCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEECHHHHHHHHCCCCEEEEECCC APTLEFSYSHPDLLDRAAFDFPEVNFILAHGAVHHVDACVRQCAYRPNVYLDISAFLGSQ CCEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEHHHHCCC HPQGWPAALADLFRMNLNHKILFGTDWPLFRNSGGHRKVMNQFLARSGPLAAVAPMQRKW CCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCCCHHHHHHHHHHCCCCCEEECCHHHHE LMADNARALLPAVHTADAAA EECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA