| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027873
Identifier: 238027873
GI number: 238027873
Start: 2534835
End: 2536664
Strand: Direct
Name: 238027873
Synonym: bglu_1g23060
Alternate gene names: NA
Gene position: 2534835-2536664 (Clockwise)
Preceding gene: 238027862
Following gene: 238027874
Centisome position: 64.89
GC content: 74.37
Gene sequence:
>1830_bases ATGAACGATCGGCCGCCCCTGGACGAGGTCGCGCTCGCCGAGCCCGGCGCCGCCGCGCGCGCGGCGTCGTCCGCCGTCTG GCTGGACGCCGCCGAGCTGCACGCGCTCCGCCTCGCGGCGCAAGGCGTGCCGGCACCCGGCCAGGCCGCCGCCGTGGCGC GGCTGCGCGATGCGCTAGCCCGGGTCGACGGGGCGCGGCCCGTGATCGTGCTCGACGATCCCGTGCTGCGCGACACCCGC GCATTCGATGCCATTGCGCAGACGCTCGCGGCCGCACTCGGCGCCGACGGCAGCGCGCTCGCGCAGGCCTGCATCGTGGT GCTCGGCGATCCGCTCGCGGACGCCGCAGACGAGCGCGGAGCCGCGGCGGCAAGCGCGCTCGACACGCTGACCGATGCGG TCGCGGACATGCTGTTCGAGGTGCGCCGCCGCGCGGACGGGTACTTCGAGAATCAGGCGCTCCCGCTGCCGGGCTACGCC TCGGCCGGCACCGATCTGCTGACGGCCGAGGCCGTGCGCGCGTGGCTCGCGGCCGACGCGGACGCCGGCGTGCACGTGCT GCGCGGCGATCTGCGCATCACCTGGCACGCGCTCGCCGGCGCGGCGGCGCAAGCGATCGGCGTCGATACGCGGCCGGCCT CTGCCGGCTCCGGCACCGACGCGCTCGCCGAGCTGCTCGGCGCGAACCTGCTGCACGCCATGCATCGGCTCGGCTGCGCG GGCGAGGCGCCGCAGCGCGCCGAAGGCGTCCCGCCCCGCCGGCTGCGCTGCGCGCCGTTCGACTGGCGCTCGCGCGTGGC AGCGCGCGTCGCGCTCCATGCCGCCGCGCACGCAAGCCGCACCGCACCACGCCTGGCCGAGCTGCCGGCCGCGCGCCGCA TCACGACGGGCACCGGCCACGCGTTCCTTCACACCGGTCGCGGCCCCCGCGCGCTGCTGCTCGTCAATGCCTTCGGCATA CCCAACGACGTCTGGCACGATTTCGCCGCCGCGCTCGCGCCGGAGGTCGCCGTCTACTTGCTGGACGCGCTGCACGAGCA GTCCGCCGACGCGGGGTTGACGCGCCTCTACTACACGGAACCCGAGGCACCGTCGCGCTATGCGGACGCGGTGGCCGAGC TGCTCGACCTCGAAGGGCTCGCGTCGATCCATGTCGCGAGCTGGTGCGGCGGCGCGCGCTACGCGCTGGCGCTGGCGCGC GCGCTGCCGGGCCGCATCGCGTCGCTGAGCCTGATCGCGCCGTCGTTCGCCGGCGCGCAAGACTACGACGGCGCGGACAG CGCGTACGAGAACAACCTCAACACGATGTGCTCGCTGGTGGCGCGCATGCCGAAGGCGGCGGAAAGCATGGCGAAATCGA TGCTGGCGATGCTCGACAAGCGCGACAAGGACGAAGCACGGTCGGGCGGCCACGCGTCGATGCTCGCCCAGGCCGACGCG GTGACGCGCCACTGGCTGCACGCACCGTTCGTCACGCCGTCCAACATGGTCGACTACAGCCGCCAGCTGCTGAATTTCCG CGCGCATCGGATCGAAGCGCAGCGCGACGACACGCTCGCCGGCCTGCCCGCGCTGCTCGTCACCGGCCAGTACGACGAAA TGACATGCGCGACGCGCGCCCACGCGATCGGCGATGCGCTGCTCCGCCCGCTGCGCATCGAGCTGCGCGGCGGCAGCCAC CACATGATTCACCAGAACGCGGCCCTGCTCGCGCAGCTGGTCGGCGGCTTTATCGCCGATCCCGCGCTCGCGGCCGGCGC GCTGCCGCATCCGCGGCTGTGCATGGCCGCACCGCCCGCCGGCGAGGAGATGGAGTCCGGCGAGCTGTGA
Upstream 100 bases:
>100_bases GCTTCGCGGCGCACACGCAGCAGGTCGCGAATCTCGATACGCTCGGCGACGCCGCCGATCTGGTCGAGATGCTGATGACG GTGAAAGCGTGAGCGCCGCC
Downstream 100 bases:
>100_bases CGCGCGCCGTGCGCTGCCCGTTCGGACAGTTACTGGCGGGCGCCGCCAATCATTACATTCTGGTTTCATCAGCCATCCGA ATCGAATCCGTCCGCACCCA
Product: putative hydrolase/decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MNDRPPLDEVALAEPGAAARAASSAVWLDAAELHALRLAAQGVPAPGQAAAVARLRDALARVDGARPVIVLDDPVLRDTR AFDAIAQTLAAALGADGSALAQACIVVLGDPLADAADERGAAAASALDTLTDAVADMLFEVRRRADGYFENQALPLPGYA SAGTDLLTAEAVRAWLAADADAGVHVLRGDLRITWHALAGAAAQAIGVDTRPASAGSGTDALAELLGANLLHAMHRLGCA GEAPQRAEGVPPRRLRCAPFDWRSRVAARVALHAAAHASRTAPRLAELPAARRITTGTGHAFLHTGRGPRALLLVNAFGI PNDVWHDFAAALAPEVAVYLLDALHEQSADAGLTRLYYTEPEAPSRYADAVAELLDLEGLASIHVASWCGGARYALALAR ALPGRIASLSLIAPSFAGAQDYDGADSAYENNLNTMCSLVARMPKAAESMAKSMLAMLDKRDKDEARSGGHASMLAQADA VTRHWLHAPFVTPSNMVDYSRQLLNFRAHRIEAQRDDTLAGLPALLVTGQYDEMTCATRAHAIGDALLRPLRIELRGGSH HMIHQNAALLAQLVGGFIADPALAAGALPHPRLCMAAPPAGEEMESGEL
Sequences:
>Translated_609_residues MNDRPPLDEVALAEPGAAARAASSAVWLDAAELHALRLAAQGVPAPGQAAAVARLRDALARVDGARPVIVLDDPVLRDTR AFDAIAQTLAAALGADGSALAQACIVVLGDPLADAADERGAAAASALDTLTDAVADMLFEVRRRADGYFENQALPLPGYA SAGTDLLTAEAVRAWLAADADAGVHVLRGDLRITWHALAGAAAQAIGVDTRPASAGSGTDALAELLGANLLHAMHRLGCA GEAPQRAEGVPPRRLRCAPFDWRSRVAARVALHAAAHASRTAPRLAELPAARRITTGTGHAFLHTGRGPRALLLVNAFGI PNDVWHDFAAALAPEVAVYLLDALHEQSADAGLTRLYYTEPEAPSRYADAVAELLDLEGLASIHVASWCGGARYALALAR ALPGRIASLSLIAPSFAGAQDYDGADSAYENNLNTMCSLVARMPKAAESMAKSMLAMLDKRDKDEARSGGHASMLAQADA VTRHWLHAPFVTPSNMVDYSRQLLNFRAHRIEAQRDDTLAGLPALLVTGQYDEMTCATRAHAIGDALLRPLRIELRGGSH HMIHQNAALLAQLVGGFIADPALAAGALPHPRLCMAAPPAGEEMESGEL >Mature_609_residues MNDRPPLDEVALAEPGAAARAASSAVWLDAAELHALRLAAQGVPAPGQAAAVARLRDALARVDGARPVIVLDDPVLRDTR AFDAIAQTLAAALGADGSALAQACIVVLGDPLADAADERGAAAASALDTLTDAVADMLFEVRRRADGYFENQALPLPGYA SAGTDLLTAEAVRAWLAADADAGVHVLRGDLRITWHALAGAAAQAIGVDTRPASAGSGTDALAELLGANLLHAMHRLGCA GEAPQRAEGVPPRRLRCAPFDWRSRVAARVALHAAAHASRTAPRLAELPAARRITTGTGHAFLHTGRGPRALLLVNAFGI PNDVWHDFAAALAPEVAVYLLDALHEQSADAGLTRLYYTEPEAPSRYADAVAELLDLEGLASIHVASWCGGARYALALAR ALPGRIASLSLIAPSFAGAQDYDGADSAYENNLNTMCSLVARMPKAAESMAKSMLAMLDKRDKDEARSGGHASMLAQADA VTRHWLHAPFVTPSNMVDYSRQLLNFRAHRIEAQRDDTLAGLPALLVTGQYDEMTCATRAHAIGDALLRPLRIELRGGSH HMIHQNAALLAQLVGGFIADPALAAGALPHPRLCMAAPPAGEEMESGEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63746; Mature: 63746
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRPPLDEVALAEPGAAARAASSAVWLDAAELHALRLAAQGVPAPGQAAAVARLRDALA CCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RVDGARPVIVLDDPVLRDTRAFDAIAQTLAAALGADGSALAQACIVVLGDPLADAADERG HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCC AAAASALDTLTDAVADMLFEVRRRADGYFENQALPLPGYASAGTDLLTAEAVRAWLAADA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC DAGVHVLRGDLRITWHALAGAAAQAIGVDTRPASAGSGTDALAELLGANLLHAMHRLGCA CCCEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GEAPQRAEGVPPRRLRCAPFDWRSRVAARVALHAAAHASRTAPRLAELPAARRITTGTGH CCCCHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCC AFLHTGRGPRALLLVNAFGIPNDVWHDFAAALAPEVAVYLLDALHEQSADAGLTRLYYTE EEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC PEAPSRYADAVAELLDLEGLASIHVASWCGGARYALALARALPGRIASLSLIAPSFAGAQ CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC DYDGADSAYENNLNTMCSLVARMPKAAESMAKSMLAMLDKRDKDEARSGGHASMLAQADA CCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH VTRHWLHAPFVTPSNMVDYSRQLLNFRAHRIEAQRDDTLAGLPALLVTGQYDEMTCATRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHEEECCCCHHHHHHHH HAIGDALLRPLRIELRGGSHHMIHQNAALLAQLVGGFIADPALAAGALPHPRLCMAAPPA HHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEECCCC GEEMESGEL CCCCCCCCC >Mature Secondary Structure MNDRPPLDEVALAEPGAAARAASSAVWLDAAELHALRLAAQGVPAPGQAAAVARLRDALA CCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RVDGARPVIVLDDPVLRDTRAFDAIAQTLAAALGADGSALAQACIVVLGDPLADAADERG HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCC AAAASALDTLTDAVADMLFEVRRRADGYFENQALPLPGYASAGTDLLTAEAVRAWLAADA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC DAGVHVLRGDLRITWHALAGAAAQAIGVDTRPASAGSGTDALAELLGANLLHAMHRLGCA CCCEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GEAPQRAEGVPPRRLRCAPFDWRSRVAARVALHAAAHASRTAPRLAELPAARRITTGTGH CCCCHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCC AFLHTGRGPRALLLVNAFGIPNDVWHDFAAALAPEVAVYLLDALHEQSADAGLTRLYYTE EEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC PEAPSRYADAVAELLDLEGLASIHVASWCGGARYALALARALPGRIASLSLIAPSFAGAQ CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC DYDGADSAYENNLNTMCSLVARMPKAAESMAKSMLAMLDKRDKDEARSGGHASMLAQADA CCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH VTRHWLHAPFVTPSNMVDYSRQLLNFRAHRIEAQRDDTLAGLPALLVTGQYDEMTCATRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHEEECCCCHHHHHHHH HAIGDALLRPLRIELRGGSHHMIHQNAALLAQLVGGFIADPALAAGALPHPRLCMAAPPA HHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEECCCC GEEMESGEL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA