Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027872

Identifier: 238027872

GI number: 238027872

Start: 2533643

End: 2534389

Strand: Reverse

Name: 238027872

Synonym: bglu_1g23050

Alternate gene names: NA

Gene position: 2534389-2533643 (Counterclockwise)

Preceding gene: 238027878

Following gene: 238027871

Centisome position: 64.88

GC content: 61.58

Gene sequence:

>747_bases
ATGACGCTTGCAGGCGAACACGTGCTGATGGACAAGGCAACTTTCTCGCGCGCATTGCGCGACACGCTGGACGAGCAACT
GACGCTCGATCATCCGATCTTCGCGGAGCTGTTCACGCCGCAGAAGAACTGGCGGCTGCTCAAGATCATCACGCTCGAGG
GATACCAGATCACCCGGTATTTTCTCGAGTACATCGAGAATCTGTATTTCCGCTGCCCGTTCCCCGACCACAAGCGCCGG
CTGCTGTACAACCTGTTCGAGGAAGAGACGGGACGCTTCTCGAAGACGAAGAACCACGTCGAGCTGATGGAGGACTTCAT
CCGCGCGCAGCGGATCGACGACGAGGAACGCGATGCATGGACGCCGTCCGACGCCACGCGCGAGCTGATCGATTACCGGC
TCGTGAACTGCAAGGGCGAGCACACCTACCATATCGGCGCGGCCGCGGTGATGATCGCGAGCGAAGGCCAGAGCCTCGAA
ACCCGCGCGGGCGATGCGCGCCACTCGATTCTCGCGAAGTGCTACGGGCTGAGCGAAGCCGATACGCGCTTCTTCTCGGT
ACACCAGAAGGAGGACGTCGCGCACGTCGCGGAAGGCATCTCGCTCGTGACCGATCTGTGCACGACCGTGCAGATGCAGC
AGGAAGCGCTGTTCGCGGTGCGCCATACCTGCAAGCTGTTCTGGAACATGTATGAAAGCGCCGCGCAGAAGTACTACGCC
TCCGCGGAGGGCGTCGCGCTCGCGTGA

Upstream 100 bases:

>100_bases
TACAGGCGTGGCACGTGGGCAACGTACCCGCCCGAACGAACAGGTTTCAGTGACGAAAGCCGCCTTTACATTAGCGCTAC
CCAACCCACAGGGAGCGATC

Downstream 100 bases:

>100_bases
CGGGGAAGCGCCGATGATGACCTTCGATGATCTCGTCGCGCGCCTGCGCGACAGCAGCCACACCCTGAGCTTCGTCGACG
ATCAGGGACGCGAAACCGTC

Product: pyrroloquinoline quinone (coenzyme pqq) biosynthesis protein c

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRYFLEYIENLYFRCPFPDHKRR
LLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAWTPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLE
TRAGDARHSILAKCYGLSEADTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA
SAEGVALA

Sequences:

>Translated_248_residues
MTLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRYFLEYIENLYFRCPFPDHKRR
LLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAWTPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLE
TRAGDARHSILAKCYGLSEADTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA
SAEGVALA
>Mature_247_residues
TLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRYFLEYIENLYFRCPFPDHKRRL
LYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAWTPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLET
RAGDARHSILAKCYGLSEADTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYAS
AEGVALA

Specific function: Unknown

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28688; Mature: 28557

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEECCHHHHHH
FLEYIENLYFRCPFPDHKRRLLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAW
HHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLETRAGDARHSILAKCYGLSEA
CCCHHHHHHHHHHHCCCCCCCEEEEHHEEEEEECCCCCCHHHCCHHHHHHHHHHHCCCHH
DTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEGVALA
CCCCCCCC
>Mature Secondary Structure 
TLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEECCHHHHHH
FLEYIENLYFRCPFPDHKRRLLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAW
HHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLETRAGDARHSILAKCYGLSEA
CCCHHHHHHHHHHHCCCCCCCEEEEHHEEEEEECCCCCCHHHCCHHHHHHHHHHHCCCHH
DTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEGVALA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA