| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027872
Identifier: 238027872
GI number: 238027872
Start: 2533643
End: 2534389
Strand: Reverse
Name: 238027872
Synonym: bglu_1g23050
Alternate gene names: NA
Gene position: 2534389-2533643 (Counterclockwise)
Preceding gene: 238027878
Following gene: 238027871
Centisome position: 64.88
GC content: 61.58
Gene sequence:
>747_bases ATGACGCTTGCAGGCGAACACGTGCTGATGGACAAGGCAACTTTCTCGCGCGCATTGCGCGACACGCTGGACGAGCAACT GACGCTCGATCATCCGATCTTCGCGGAGCTGTTCACGCCGCAGAAGAACTGGCGGCTGCTCAAGATCATCACGCTCGAGG GATACCAGATCACCCGGTATTTTCTCGAGTACATCGAGAATCTGTATTTCCGCTGCCCGTTCCCCGACCACAAGCGCCGG CTGCTGTACAACCTGTTCGAGGAAGAGACGGGACGCTTCTCGAAGACGAAGAACCACGTCGAGCTGATGGAGGACTTCAT CCGCGCGCAGCGGATCGACGACGAGGAACGCGATGCATGGACGCCGTCCGACGCCACGCGCGAGCTGATCGATTACCGGC TCGTGAACTGCAAGGGCGAGCACACCTACCATATCGGCGCGGCCGCGGTGATGATCGCGAGCGAAGGCCAGAGCCTCGAA ACCCGCGCGGGCGATGCGCGCCACTCGATTCTCGCGAAGTGCTACGGGCTGAGCGAAGCCGATACGCGCTTCTTCTCGGT ACACCAGAAGGAGGACGTCGCGCACGTCGCGGAAGGCATCTCGCTCGTGACCGATCTGTGCACGACCGTGCAGATGCAGC AGGAAGCGCTGTTCGCGGTGCGCCATACCTGCAAGCTGTTCTGGAACATGTATGAAAGCGCCGCGCAGAAGTACTACGCC TCCGCGGAGGGCGTCGCGCTCGCGTGA
Upstream 100 bases:
>100_bases TACAGGCGTGGCACGTGGGCAACGTACCCGCCCGAACGAACAGGTTTCAGTGACGAAAGCCGCCTTTACATTAGCGCTAC CCAACCCACAGGGAGCGATC
Downstream 100 bases:
>100_bases CGGGGAAGCGCCGATGATGACCTTCGATGATCTCGTCGCGCGCCTGCGCGACAGCAGCCACACCCTGAGCTTCGTCGACG ATCAGGGACGCGAAACCGTC
Product: pyrroloquinoline quinone (coenzyme pqq) biosynthesis protein c
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRYFLEYIENLYFRCPFPDHKRR LLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAWTPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLE TRAGDARHSILAKCYGLSEADTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA SAEGVALA
Sequences:
>Translated_248_residues MTLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRYFLEYIENLYFRCPFPDHKRR LLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAWTPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLE TRAGDARHSILAKCYGLSEADTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA SAEGVALA >Mature_247_residues TLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRYFLEYIENLYFRCPFPDHKRRL LYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAWTPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLET RAGDARHSILAKCYGLSEADTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYAS AEGVALA
Specific function: Unknown
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28688; Mature: 28557
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRY CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEECCHHHHHH FLEYIENLYFRCPFPDHKRRLLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAW HHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLETRAGDARHSILAKCYGLSEA CCCHHHHHHHHHHHCCCCCCCEEEEHHEEEEEECCCCCCHHHCCHHHHHHHHHHHCCCHH DTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAEGVALA CCCCCCCC >Mature Secondary Structure TLAGEHVLMDKATFSRALRDTLDEQLTLDHPIFAELFTPQKNWRLLKIITLEGYQITRY CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEECCHHHHHH FLEYIENLYFRCPFPDHKRRLLYNLFEEETGRFSKTKNHVELMEDFIRAQRIDDEERDAW HHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPSDATRELIDYRLVNCKGEHTYHIGAAAVMIASEGQSLETRAGDARHSILAKCYGLSEA CCCHHHHHHHHHHHCCCCCCCEEEEHHEEEEEECCCCCCHHHCCHHHHHHHHHHHCCCHH DTRFFSVHQKEDVAHVAEGISLVTDLCTTVQMQQEALFAVRHTCKLFWNMYESAAQKYYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAEGVALA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA