| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027857
Identifier: 238027857
GI number: 238027857
Start: 2497017
End: 2498738
Strand: Reverse
Name: 238027857
Synonym: bglu_1g22880
Alternate gene names: NA
Gene position: 2498738-2497017 (Counterclockwise)
Preceding gene: 238027863
Following gene: 238027856
Centisome position: 63.96
GC content: 64.98
Gene sequence:
>1722_bases ATGAAGTCACTTGTTTTTCCGAAGCGCCGCGAGGTCTCGCTAGGCAGCGACGTGATCGTGCTCGTCTGCGCCGTGCTGTT CGCATGGTTCTTCGCGACCACGTGGATCGACATGCATCGTCCGGCCAGCGAGAATCCGGCCGTCGCGCTCGCGCCGGCGA ACCTGCTCTACTACTCGATGCGTACCACCATGCGCTTCCTGATCGGCATGGTCTGGTCCACGCTGTTCTCGCTGGTGTTC GGCGTGCTCGCCGCGCGCTATGCGCCGATGCGCCGCGTGATCCTGCCGTTCGTCAATTTCATGGAATCGGTGCCGCTGGT GGGCTTCATGACGTTTACCACCGGCTTCTTCCTCGGGCTCTATCCGCACAACACGATGGGGATGGAGGCGCTCGCGATCT TCGCGGTGTTCACGGGGCAGGCCTGGAACATGATGCTGACCGTCTACCAGACCATGCGCGTGGTGCCCAAGGAACTGCGC GAAGTGGCCGATTCGTTTCGCTACAACGCCTGGCAGCGCTTCTGGCGTCTCGAATGGCCGTACTCGGTGCCGGGCTTCCT CTGGAACGCCATCAATTCGCAGGCGGCCGCCTGGTTCGCGCTGGTCGCCTCGGAGGCGATTCCCGCCGCCAACGGCGACA CCGTGCTGCTGCCCGGCGTGGGCTCGTACGTCTCGATGGCACTCGACTCGGCCAGCTATCGCGCCGTCGTCTACGCGCTG ATCGCGCTGGTGCTGAACATCGTCGTGATCGACCAGTTCATTTTCCGCCCGCTGGTGCGCTACACGATTCGCTTCAAGAG CGACGATTCGGCGGCCAAGCGCGATATGCAGTACCGCTCGTGGTTCTACGACTGTCTCGCCAGTTCGCGGATCGCACGCT CGGCCGGCGAGCTGCTCGCGCAACTGGCCAATGCCTGGATCTTCGGGCTGCCGCGCGTCTGGTACGCGCTGCGCATCGAC TGCCTGACGCGCCTGCTGGCGCGCGCGAACTGGCTCTGGTCGACGATCTGGTACTTCGCGCTGACGGTGGGCTGCGCCTA CGGCGGCTACCAGCTCTGGCAGTACGTGCCGAAGCAGGACCTGGCGATCATGCCCTGGTGGATGCTGGAGACCGCCGCGC GCGTCACGCTCGCGATGCTGCTCAGCTGTTTGCTGTTCGTGCCGCTCGGCGTCTGGATGGCGTGCCACCCGCGGCGGCTG ACCTGGTGCCAGCCGGTCGCTCAGGTGCTCGCGGCGATCCCGCCGAACATCTATTACCCGCTGATCGCGCTGTTCGTGAT CACCGCGCACCGCTCGCTCGGCTGGTGGACGATCCCGATGATCATGGTCGGCACGCAGTGGTACTACCTGTTCAATGCCA TCGCCGGCACGCTCGCGATTCCCACCCAGATCACCGAGGTCAGCCAGATTTTCCATCTGAAGGGCGCCATGTGGTGGCGC AAGTACATGCTGCCGGCGATCTTTCCGTACATCGTGACCGGCACCATCTCCGCCGCCGGCGGCGCCTGGAACGCGGCGAT CGCCGCCGAGATCGTGCAATGGGGCTCGCACACGGCCAGCACCTCGGGCCTCGGCGCCTTCATCTCCACCACCACCGCCA ATGGCGATCACGCGGCCGCCGCGCTCGGCTGCACCGCCATGTGCTCCATGGTTGCGCTTTGCATCATGTTCGTCTGGCAG CCGCTGTACCGCTTCGCCGAACGCAAGTTCCGTTACGACTGA
Upstream 100 bases:
>100_bases CGCGCGCCGCCGCCTTGCCGCGCTTCGCGCCTCGTCGTGCCGTGCCGGCCGCGCGCCGCCTCGCTTTCCCCAACCGTTCC GTAGCTCAGGAGCCAGCAAC
Downstream 100 bases:
>100_bases TCCGATCCCAAGGAGTCACCTCATGAAGAACCTGTCGAATCCTTTCCATGTCCTGGCGCCGCTGCCCTCGCGCTTCCTCG AGCTGAAGAACGTCAGCAAG
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Anion Transporter; ABC Transporter; Anion Transporter Permease Protein; Nitrate ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Transmembrane Permease Protein; ABC-Type Anion Transport System; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; ABC-Type Anion Transport System Permease Component; Nitrate Transport System Permease
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MKSLVFPKRREVSLGSDVIVLVCAVLFAWFFATTWIDMHRPASENPAVALAPANLLYYSMRTTMRFLIGMVWSTLFSLVF GVLAARYAPMRRVILPFVNFMESVPLVGFMTFTTGFFLGLYPHNTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELR EVADSFRYNAWQRFWRLEWPYSVPGFLWNAINSQAAAWFALVASEAIPAANGDTVLLPGVGSYVSMALDSASYRAVVYAL IALVLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCLASSRIARSAGELLAQLANAWIFGLPRVWYALRID CLTRLLARANWLWSTIWYFALTVGCAYGGYQLWQYVPKQDLAIMPWWMLETAARVTLAMLLSCLLFVPLGVWMACHPRRL TWCQPVAQVLAAIPPNIYYPLIALFVITAHRSLGWWTIPMIMVGTQWYYLFNAIAGTLAIPTQITEVSQIFHLKGAMWWR KYMLPAIFPYIVTGTISAAGGAWNAAIAAEIVQWGSHTASTSGLGAFISTTTANGDHAAAALGCTAMCSMVALCIMFVWQ PLYRFAERKFRYD
Sequences:
>Translated_573_residues MKSLVFPKRREVSLGSDVIVLVCAVLFAWFFATTWIDMHRPASENPAVALAPANLLYYSMRTTMRFLIGMVWSTLFSLVF GVLAARYAPMRRVILPFVNFMESVPLVGFMTFTTGFFLGLYPHNTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELR EVADSFRYNAWQRFWRLEWPYSVPGFLWNAINSQAAAWFALVASEAIPAANGDTVLLPGVGSYVSMALDSASYRAVVYAL IALVLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCLASSRIARSAGELLAQLANAWIFGLPRVWYALRID CLTRLLARANWLWSTIWYFALTVGCAYGGYQLWQYVPKQDLAIMPWWMLETAARVTLAMLLSCLLFVPLGVWMACHPRRL TWCQPVAQVLAAIPPNIYYPLIALFVITAHRSLGWWTIPMIMVGTQWYYLFNAIAGTLAIPTQITEVSQIFHLKGAMWWR KYMLPAIFPYIVTGTISAAGGAWNAAIAAEIVQWGSHTASTSGLGAFISTTTANGDHAAAALGCTAMCSMVALCIMFVWQ PLYRFAERKFRYD >Mature_573_residues MKSLVFPKRREVSLGSDVIVLVCAVLFAWFFATTWIDMHRPASENPAVALAPANLLYYSMRTTMRFLIGMVWSTLFSLVF GVLAARYAPMRRVILPFVNFMESVPLVGFMTFTTGFFLGLYPHNTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELR EVADSFRYNAWQRFWRLEWPYSVPGFLWNAINSQAAAWFALVASEAIPAANGDTVLLPGVGSYVSMALDSASYRAVVYAL IALVLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCLASSRIARSAGELLAQLANAWIFGLPRVWYALRID CLTRLLARANWLWSTIWYFALTVGCAYGGYQLWQYVPKQDLAIMPWWMLETAARVTLAMLLSCLLFVPLGVWMACHPRRL TWCQPVAQVLAAIPPNIYYPLIALFVITAHRSLGWWTIPMIMVGTQWYYLFNAIAGTLAIPTQITEVSQIFHLKGAMWWR KYMLPAIFPYIVTGTISAAGGAWNAAIAAEIVQWGSHTASTSGLGAFISTTTANGDHAAAALGCTAMCSMVALCIMFVWQ PLYRFAERKFRYD
Specific function: Unknown
COG id: COG4986
COG function: function code P; ABC-type anion transport system, duplicated permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64751; Mature: 64751
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLVFPKRREVSLGSDVIVLVCAVLFAWFFATTWIDMHRPASENPAVALAPANLLYYSM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHH RTTMRFLIGMVWSTLFSLVFGVLAARYAPMRRVILPFVNFMESVPLVGFMTFTTGFFLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC YPHNTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELREVADSFRYNAWQRFWRLEWP CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YSVPGFLWNAINSQAAAWFALVASEAIPAANGDTVLLPGVGSYVSMALDSASYRAVVYAL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHH IALVLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCLASSRIARSAGELLA HHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLANAWIFGLPRVWYALRIDCLTRLLARANWLWSTIWYFALTVGCAYGGYQLWQYVPKQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC LAIMPWWMLETAARVTLAMLLSCLLFVPLGVWMACHPRRLTWCQPVAQVLAAIPPNIYYP CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH LIALFVITAHRSLGWWTIPMIMVGTQWYYLFNAIAGTLAIPTQITEVSQIFHLKGAMWWR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KYMLPAIFPYIVTGTISAAGGAWNAAIAAEIVQWGSHTASTSGLGAFISTTTANGDHAAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCHHHH ALGCTAMCSMVALCIMFVWQPLYRFAERKFRYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSLVFPKRREVSLGSDVIVLVCAVLFAWFFATTWIDMHRPASENPAVALAPANLLYYSM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHH RTTMRFLIGMVWSTLFSLVFGVLAARYAPMRRVILPFVNFMESVPLVGFMTFTTGFFLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC YPHNTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELREVADSFRYNAWQRFWRLEWP CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YSVPGFLWNAINSQAAAWFALVASEAIPAANGDTVLLPGVGSYVSMALDSASYRAVVYAL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHH IALVLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCLASSRIARSAGELLA HHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLANAWIFGLPRVWYALRIDCLTRLLARANWLWSTIWYFALTVGCAYGGYQLWQYVPKQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC LAIMPWWMLETAARVTLAMLLSCLLFVPLGVWMACHPRRLTWCQPVAQVLAAIPPNIYYP CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH LIALFVITAHRSLGWWTIPMIMVGTQWYYLFNAIAGTLAIPTQITEVSQIFHLKGAMWWR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KYMLPAIFPYIVTGTISAAGGAWNAAIAAEIVQWGSHTASTSGLGAFISTTTANGDHAAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCHHHH ALGCTAMCSMVALCIMFVWQPLYRFAERKFRYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA