Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027829

Identifier: 238027829

GI number: 238027829

Start: 2465500

End: 2466141

Strand: Reverse

Name: 238027829

Synonym: bglu_1g22600

Alternate gene names: NA

Gene position: 2466141-2465500 (Counterclockwise)

Preceding gene: 238027830

Following gene: 238027828

Centisome position: 63.13

GC content: 61.21

Gene sequence:

>642_bases
GTGCGTATCTATCTCTCGTCCTTCGATGTGGGTGCCCGCCCGGAACGGCTCGCGGGCCTGGTCGGCGGCCAAATGCGCGC
GGCCGTCATCGTCAACGCGCTTGACCATCGCGAATCGGCCCGCGCGCAATGGCTGGAGAGCCAGACGGCCAAACTGCGCG
CGCTGGGGTTTAGCGCGCAAGAAATCGATCTCAGGCACTTCTTCGGCAATACCGATCGCATAGGCGAGGCTCTTGCCCGG
TTCGACGCGGTATGGATCAATGGTGGGAACGCATTCATACTTCGCCGCGCGATGAAGCAGAGCGGATTCGACACCGCGAT
AGTGGATTTGCTCTCGCGCGACAGAATCGTCTACGCGGAATTCAGTGCGGCGGCGATCATTGCGTCGAGCACGCTGCGCG
CGCTCGATTGCGTCAGCGACCCCGTGGAAGTCCCCCGTGGATACGACCCGGCCGTGATCTGGGACGGGCTTGGAATCCTG
CCGTTTTCCCTTGTCGTGCATTTCGAATCCGATCATCCCGAGTCGGTAGCGGTCGGCGAGGAAGTTGCTTTCTACGCGCG
CCACCAACTGCCATATCAAACCTTGAAAGACGGTGAGGTTTTTGTCATGGACGGCATGCGCAGCGAGATCGTTGGCCCGT
AG

Upstream 100 bases:

>100_bases
AGCGGCGGCGCGGCGACGTTCGGCAAGCTACGCGGATGGCGCCGGGCGCTCGACAGAGCTTGTATATTTACCCGTACCTA
GCCGTTGCGGAGACTTTCCG

Downstream 100 bases:

>100_bases
CGCGGCGTTGCAGGCGGCTGGGGTTGGCCGGGATGGCTGGGGGCCCGGCGGGCGGGGACGCACCTGCTGCCTGCGCCGGC
GCGCCACGGCGTCCGACGGT

Product: putative serine peptidase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQEIDLRHFFGNTDRIGEALAR
FDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAEFSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGIL
PFSLVVHFESDHPESVAVGEEVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP

Sequences:

>Translated_213_residues
MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQEIDLRHFFGNTDRIGEALAR
FDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAEFSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGIL
PFSLVVHFESDHPESVAVGEEVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP
>Mature_213_residues
MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQEIDLRHFFGNTDRIGEALAR
FDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAEFSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGIL
PFSLVVHFESDHPESVAVGEEVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23469; Mature: 23469

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQ
CEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIDLRHFFGNTDRIGEALARFDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAE
HHHHHHHCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE
FSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGILPFSLVVHFESDHPESVAVGE
CCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCH
EVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP
HHHHHHHHCCCHHHCCCCCEEEECCCHHHCCCC
>Mature Secondary Structure
MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQ
CEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIDLRHFFGNTDRIGEALARFDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAE
HHHHHHHCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE
FSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGILPFSLVVHFESDHPESVAVGE
CCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCH
EVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP
HHHHHHHHCCCHHHCCCCCEEEECCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA