| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027829
Identifier: 238027829
GI number: 238027829
Start: 2465500
End: 2466141
Strand: Reverse
Name: 238027829
Synonym: bglu_1g22600
Alternate gene names: NA
Gene position: 2466141-2465500 (Counterclockwise)
Preceding gene: 238027830
Following gene: 238027828
Centisome position: 63.13
GC content: 61.21
Gene sequence:
>642_bases GTGCGTATCTATCTCTCGTCCTTCGATGTGGGTGCCCGCCCGGAACGGCTCGCGGGCCTGGTCGGCGGCCAAATGCGCGC GGCCGTCATCGTCAACGCGCTTGACCATCGCGAATCGGCCCGCGCGCAATGGCTGGAGAGCCAGACGGCCAAACTGCGCG CGCTGGGGTTTAGCGCGCAAGAAATCGATCTCAGGCACTTCTTCGGCAATACCGATCGCATAGGCGAGGCTCTTGCCCGG TTCGACGCGGTATGGATCAATGGTGGGAACGCATTCATACTTCGCCGCGCGATGAAGCAGAGCGGATTCGACACCGCGAT AGTGGATTTGCTCTCGCGCGACAGAATCGTCTACGCGGAATTCAGTGCGGCGGCGATCATTGCGTCGAGCACGCTGCGCG CGCTCGATTGCGTCAGCGACCCCGTGGAAGTCCCCCGTGGATACGACCCGGCCGTGATCTGGGACGGGCTTGGAATCCTG CCGTTTTCCCTTGTCGTGCATTTCGAATCCGATCATCCCGAGTCGGTAGCGGTCGGCGAGGAAGTTGCTTTCTACGCGCG CCACCAACTGCCATATCAAACCTTGAAAGACGGTGAGGTTTTTGTCATGGACGGCATGCGCAGCGAGATCGTTGGCCCGT AG
Upstream 100 bases:
>100_bases AGCGGCGGCGCGGCGACGTTCGGCAAGCTACGCGGATGGCGCCGGGCGCTCGACAGAGCTTGTATATTTACCCGTACCTA GCCGTTGCGGAGACTTTCCG
Downstream 100 bases:
>100_bases CGCGGCGTTGCAGGCGGCTGGGGTTGGCCGGGATGGCTGGGGGCCCGGCGGGCGGGGACGCACCTGCTGCCTGCGCCGGC GCGCCACGGCGTCCGACGGT
Product: putative serine peptidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQEIDLRHFFGNTDRIGEALAR FDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAEFSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGIL PFSLVVHFESDHPESVAVGEEVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP
Sequences:
>Translated_213_residues MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQEIDLRHFFGNTDRIGEALAR FDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAEFSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGIL PFSLVVHFESDHPESVAVGEEVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP >Mature_213_residues MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQEIDLRHFFGNTDRIGEALAR FDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAEFSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGIL PFSLVVHFESDHPESVAVGEEVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP
Specific function: Unknown
COG id: COG3340
COG function: function code E; Peptidase E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23469; Mature: 23469
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQ CEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EIDLRHFFGNTDRIGEALARFDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAE HHHHHHHCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE FSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGILPFSLVVHFESDHPESVAVGE CCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCH EVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP HHHHHHHHCCCHHHCCCCCEEEECCCHHHCCCC >Mature Secondary Structure MRIYLSSFDVGARPERLAGLVGGQMRAAVIVNALDHRESARAQWLESQTAKLRALGFSAQ CEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EIDLRHFFGNTDRIGEALARFDAVWINGGNAFILRRAMKQSGFDTAIVDLLSRDRIVYAE HHHHHHHCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE FSAAAIIASSTLRALDCVSDPVEVPRGYDPAVIWDGLGILPFSLVVHFESDHPESVAVGE CCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCH EVAFYARHQLPYQTLKDGEVFVMDGMRSEIVGP HHHHHHHHCCCHHHCCCCCEEEECCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA