Click here to switch to the map view.

The map label for this gene is ytfQ [C]

Identifier: 238027820

GI number: 238027820

Start: 2454949

End: 2455959

Strand: Direct

Name: ytfQ [C]

Synonym: bglu_1g22510

Alternate gene names: 238027820

Gene position: 2454949-2455959 (Clockwise)

Preceding gene: 238027816

Following gene: 238027821

Centisome position: 62.84

GC content: 68.35

Gene sequence:

>1011_bases
TTGTCGTCCGTTGCCGCGGCCGCGGCGCTGGCCGTGCCGCTCGCCCTGCAGGCAGCGCCTGCCCAGGCCCAGGCCCAGGC
CGCGCCCGACGGCACGCCGGTGCCCTCGCTGAAGGGCAAGCGGATCGGCATCACGGCCGCCGGCACCGATCATTACTGGG
ATCTGAAGGCCTACCAGGGTGCCATCGACGAGATCAAGCGCCTCGGCGGCACGCCGATCGCGCTCGACGCGGGCCGCAAC
GACAATCGCCAGATCGCCCAGATCCAGACGCTGATCGCGCAGAAGCCCGATGCGATCATCGAGCAGCTCGGCACGGCCTC
GGTGCTCGAGCCCTGGCTGCAGAAGATCCGCCAGGCCGGAATTCCGCTGTTCACGATCGACACGGCGTCGCCCGCCAGCC
TCAACGACACCACCTCGGACAACTTCTTCATCGGCGAGCAGCTGGCGCTGAAGCTCGTCAACGACATCCACGGCGAGGGC
AACATCCTGGTGTTCAACGGCTTCTACGGCGTGCCGGTCTGCGCGATCCGCTACGACCAGTTGAAGGCCGTGCTGAAGTA
TTACCCGAAGGTCCACATCATCGAGCCCGAGCTGCGCGACGTGATCCCGAACACCGTGCAGAACGCCTATGCGCAGGTCA
GCCAGCTGCTGACCAAGTACCCGAAGGGGCAGATCTCGGCGATCTGGTCGGCCTGGGACGTGCCGCAGGTAGGCGCCACG
CAGGCGGTGGACGCCGCGCATCGCAGCGAGATCCGCACCTACGCGGTGGACGGCAGCCCCGACGTGGTGGCGCTCGTCAA
GGATCCGAAGTCGAGCGCCGGCGCGGTGGTGGCGCAGCAGCCGGCGCTGATCGGCAAGACCGCGGCCGACAACGTGGCGC
GCTATCTGGCCGGCGACCGCACGCTGCCGCCCTACACCTACGTGCCCTCGCTGCTGGTGACCAAGGACAATGCCGGATCG
CTGCAGCAGGCGCTCGGCCAGACCCGGCCCGTTGCGGCCGCATCGAAATGA

Upstream 100 bases:

>100_bases
TCCGCAGTTTTTCGACCCTACTCGTGCCTCGATGAAGCCTCGCTCCCGCCTCCGCCCCCTTCGCTCCACGCGCCGCCTGC
ATGGCGCGTTCGCTGCCCGC

Downstream 100 bases:

>100_bases
CGGGGCCGGCCAGCACCCCGCCCGCGCTGGCGCTGCGCGGCATCGTCAAGCGCTTCGACGGCGTGCCGGCCCTGCGCGGC
GCCTCGCTGACGGTGCCGCG

Product: putative carbohydrate ABC transporter periplasmic sugar-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter; Ribose ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transport System Lipoprotein; ABC-Type Sugar Transport System Periplasmic Component; ABC Transporter; D-Ribose ABC Transporter Permease Protein; Abc Transporter Integral Membrane Subunit; ABC Transporter Periplasmic Protein; Ribose ABC Transporter Permease

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSSVAAAAALAVPLALQAAPAQAQAQAAPDGTPVPSLKGKRIGITAAGTDHYWDLKAYQGAIDEIKRLGGTPIALDAGRN
DNRQIAQIQTLIAQKPDAIIEQLGTASVLEPWLQKIRQAGIPLFTIDTASPASLNDTTSDNFFIGEQLALKLVNDIHGEG
NILVFNGFYGVPVCAIRYDQLKAVLKYYPKVHIIEPELRDVIPNTVQNAYAQVSQLLTKYPKGQISAIWSAWDVPQVGAT
QAVDAAHRSEIRTYAVDGSPDVVALVKDPKSSAGAVVAQQPALIGKTAADNVARYLAGDRTLPPYTYVPSLLVTKDNAGS
LQQALGQTRPVAAASK

Sequences:

>Translated_336_residues
MSSVAAAAALAVPLALQAAPAQAQAQAAPDGTPVPSLKGKRIGITAAGTDHYWDLKAYQGAIDEIKRLGGTPIALDAGRN
DNRQIAQIQTLIAQKPDAIIEQLGTASVLEPWLQKIRQAGIPLFTIDTASPASLNDTTSDNFFIGEQLALKLVNDIHGEG
NILVFNGFYGVPVCAIRYDQLKAVLKYYPKVHIIEPELRDVIPNTVQNAYAQVSQLLTKYPKGQISAIWSAWDVPQVGAT
QAVDAAHRSEIRTYAVDGSPDVVALVKDPKSSAGAVVAQQPALIGKTAADNVARYLAGDRTLPPYTYVPSLLVTKDNAGS
LQQALGQTRPVAAASK
>Mature_335_residues
SSVAAAAALAVPLALQAAPAQAQAQAAPDGTPVPSLKGKRIGITAAGTDHYWDLKAYQGAIDEIKRLGGTPIALDAGRND
NRQIAQIQTLIAQKPDAIIEQLGTASVLEPWLQKIRQAGIPLFTIDTASPASLNDTTSDNFFIGEQLALKLVNDIHGEGN
ILVFNGFYGVPVCAIRYDQLKAVLKYYPKVHIIEPELRDVIPNTVQNAYAQVSQLLTKYPKGQISAIWSAWDVPQVGATQ
AVDAAHRSEIRTYAVDGSPDVVALVKDPKSSAGAVVAQQPALIGKTAADNVARYLAGDRTLPPYTYVPSLLVTKDNAGSL
QQALGQTRPVAAASK

Specific function: Unknown

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790674, Length=288, Percent_Identity=25.3472222222222, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35604; Mature: 35473

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVAAAAALAVPLALQAAPAQAQAQAAPDGTPVPSLKGKRIGITAAGTDHYWDLKAYQG
CCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHH
AIDEIKRLGGTPIALDAGRNDNRQIAQIQTLIAQKPDAIIEQLGTASVLEPWLQKIRQAG
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCC
IPLFTIDTASPASLNDTTSDNFFIGEQLALKLVNDIHGEGNILVFNGFYGVPVCAIRYDQ
CCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEHHH
LKAVLKYYPKVHIIEPELRDVIPNTVQNAYAQVSQLLTKYPKGQISAIWSAWDVPQVGAT
HHHHHHHCCCEEEECHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCH
QAVDAAHRSEIRTYAVDGSPDVVALVKDPKSSAGAVVAQQPALIGKTAADNVARYLAGDR
HHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCCCEEECCCCHHCCHHHHHHHHHHHCCC
TLPPYTYVPSLLVTKDNAGSLQQALGQTRPVAAASK
CCCCHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSVAAAAALAVPLALQAAPAQAQAQAAPDGTPVPSLKGKRIGITAAGTDHYWDLKAYQG
CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHH
AIDEIKRLGGTPIALDAGRNDNRQIAQIQTLIAQKPDAIIEQLGTASVLEPWLQKIRQAG
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCC
IPLFTIDTASPASLNDTTSDNFFIGEQLALKLVNDIHGEGNILVFNGFYGVPVCAIRYDQ
CCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEHHH
LKAVLKYYPKVHIIEPELRDVIPNTVQNAYAQVSQLLTKYPKGQISAIWSAWDVPQVGAT
HHHHHHHCCCEEEECHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCH
QAVDAAHRSEIRTYAVDGSPDVVALVKDPKSSAGAVVAQQPALIGKTAADNVARYLAGDR
HHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCCCEEECCCCHHCCHHHHHHHHHHHCCC
TLPPYTYVPSLLVTKDNAGSLQQALGQTRPVAAASK
CCCCHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA