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The map label for this gene is tctD [H]

Identifier: 238027804

GI number: 238027804

Start: 2432080

End: 2432745

Strand: Reverse

Name: tctD [H]

Synonym: bglu_1g22300

Alternate gene names: 238027804

Gene position: 2432745-2432080 (Counterclockwise)

Preceding gene: 238027808

Following gene: 238027803

Centisome position: 62.27

GC content: 70.12

Gene sequence:

>666_bases
ATGCGCATTCTGGTCGTCGAGGACGACGCGGAAATCGGCGAGGCGATCGGCAGCCGCCTGACGCGCCTGGGCCACGCGGT
CGATCTCGAGCGCGACGGCGCGGCGGCCAGCAGCCTGCTCGGCGTCGAATCGTTCGATCTGGTGGTGCTCGACGTGATGC
TGCCGTCGCTGGACGGCTTCTCGGTGCTGCGCCGCCTGCGTGCCGCCGGCAGTACCACGCCGGTGCTGCTGGTGACGGCG
CGCTCGGCGATCGACGATCGCGTGAGCGGCCTGGGGCTCGGTGCCGACGATTACCTCGTGAAGCCGTTCGACTATCGCGA
ACTCGACGCGCGCGTGCAGGCGCTGCTGCGCCGCAATAGCGGCCATGCGAGCGACGTGCTGCGCTTCGGGAGCCTGTCGA
TCGACCGCAGCAGCCGGCTTGCCGAGCTGGACGGCCAGCCGCTGCCGCTCTCGCGCCAGGAGTTCGCGCTGCTGGAGATC
CTCGCCAGCCGCCCGCAGCGCGTGTTCTCGAAGGACGAGCTGCTGAACCAGTTGTTCAGCTTCGGCCGCGAGCCGTCGGC
GAACGCGGTCGAGCAGTACGTCACGCGCGTGCGCCGCAAGCTGCAGGGCAGCGACGTGGAGATCCGCACCGCGCGCGGCA
TGGGATACCAGATTGCGACGCGCTGA

Upstream 100 bases:

>100_bases
GTTCTGATGCCCAAGGTTAACAGCTTGCCGAGGAAGTAAACAGCCCCTCTCGGGAGTTTTTGAACTGGCCTCTAACCCCT
TTGACTGACAGGACATCCCC

Downstream 100 bases:

>100_bases
CTGGTTCCCGAAGACCCTGTTCGGCCGCACGCTGCTGTTCATCGCGTGCGTGGTCGTGTCGGGCGCGCTCGCGCTCGCGG
TGATCACGCGCTTCTATGCC

Product: winged helix family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRILVVEDDAEIGEAIGSRLTRLGHAVDLERDGAAASSLLGVESFDLVVLDVMLPSLDGFSVLRRLRAAGSTTPVLLVTA
RSAIDDRVSGLGLGADDYLVKPFDYRELDARVQALLRRNSGHASDVLRFGSLSIDRSSRLAELDGQPLPLSRQEFALLEI
LASRPQRVFSKDELLNQLFSFGREPSANAVEQYVTRVRRKLQGSDVEIRTARGMGYQIATR

Sequences:

>Translated_221_residues
MRILVVEDDAEIGEAIGSRLTRLGHAVDLERDGAAASSLLGVESFDLVVLDVMLPSLDGFSVLRRLRAAGSTTPVLLVTA
RSAIDDRVSGLGLGADDYLVKPFDYRELDARVQALLRRNSGHASDVLRFGSLSIDRSSRLAELDGQPLPLSRQEFALLEI
LASRPQRVFSKDELLNQLFSFGREPSANAVEQYVTRVRRKLQGSDVEIRTARGMGYQIATR
>Mature_221_residues
MRILVVEDDAEIGEAIGSRLTRLGHAVDLERDGAAASSLLGVESFDLVVLDVMLPSLDGFSVLRRLRAAGSTTPVLLVTA
RSAIDDRVSGLGLGADDYLVKPFDYRELDARVQALLRRNSGHASDVLRFGSLSIDRSSRLAELDGQPLPLSRQEFALLEI
LASRPQRVFSKDELLNQLFSFGREPSANAVEQYVTRVRRKLQGSDVEIRTARGMGYQIATR

Specific function: Transcriptional activator of the tctI tricarboxylate transport system operon [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=45.2488687782805, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=37.8378378378378, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=37.1559633027523, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=36.2385321100917, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=37.8995433789954, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=37.4449339207048, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=36.8888888888889, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=34.841628959276, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=35.4260089686099, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=34.5132743362832, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=36.283185840708, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=31.4655172413793, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=31.1111111111111, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=30, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1788550, Length=119, Percent_Identity=32.7731092436975, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790437, Length=124, Percent_Identity=34.6774193548387, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=35.6435643564356, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=32.4324324324324, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI145693157, Length=102, Percent_Identity=34.3137254901961, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1788713, Length=115, Percent_Identity=30.4347826086957, Blast_Score=61, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=103, Percent_Identity=33.0097087378641, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24281; Mature: 24281

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVVEDDAEIGEAIGSRLTRLGHAVDLERDGAAASSLLGVESFDLVVLDVMLPSLDGF
CEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHH
SVLRRLRAAGSTTPVLLVTARSAIDDRVSGLGLGADDYLVKPFDYRELDARVQALLRRNS
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCC
GHASDVLRFGSLSIDRSSRLAELDGQPLPLSRQEFALLEILASRPQRVFSKDELLNQLFS
CCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
FGREPSANAVEQYVTRVRRKLQGSDVEIRTARGMGYQIATR
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCC
>Mature Secondary Structure
MRILVVEDDAEIGEAIGSRLTRLGHAVDLERDGAAASSLLGVESFDLVVLDVMLPSLDGF
CEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHH
SVLRRLRAAGSTTPVLLVTARSAIDDRVSGLGLGADDYLVKPFDYRELDARVQALLRRNS
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCC
GHASDVLRFGSLSIDRSSRLAELDGQPLPLSRQEFALLEILASRPQRVFSKDELLNQLFS
CCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
FGREPSANAVEQYVTRVRRKLQGSDVEIRTARGMGYQIATR
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2666399; 11083839; 11677609 [H]