| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027784
Identifier: 238027784
GI number: 238027784
Start: 2407092
End: 2407553
Strand: Reverse
Name: 238027784
Synonym: bglu_1g22080
Alternate gene names: NA
Gene position: 2407553-2407092 (Counterclockwise)
Preceding gene: 238027786
Following gene: 238027776
Centisome position: 61.63
GC content: 72.29
Gene sequence:
>462_bases ATGACGACCCGACCCGAACCCTCGCCGCGCAGCGCCTACCGCCACTTCCTGCCGATCCCGACGCGCTGGATGGACAACGA CGTCTACGGCCACGTCAACAATGTCGTCTATTACAGCTACTTCGACACCGTCGTCAACGAGTACCTGATCCGCGCCGGCG TGCTCGACGTCGAGCACGGCGAAACCATCGGCCTGGTGGTCGAGACGCAGTGCAACTACTTCGCGCCGCTGGCGTTTCCG CAGCGGCTGGAGGCCGGGCTGCGCGTGGCGCGGCTCGGCGCGTCGAGCGTGCGCTACGAGATCGGCCTGTTCGCCGAGGG CGAGGCGGCGCCGGCCGCGCAGGGCCATTTCGTCCACGTCTACGTGGCGCGCGCGAGCCGCCGCCCGGTGCCGCTGCCGG ACGCGCTGCGCGCCGCGCTCGCGCCGCTCGCGGCGCCGCTGCCGCCGGCCGACGGCGGCTAG
Upstream 100 bases:
>100_bases GCCAAGCAAAGGCATGCCGGCCGCCGCTCGCGCGGCCGCTCGCCGGTTTCGACCTTTGCGACTTTTCGACTTTTCGACGT CTCCGATTTCTCCGCCGACC
Downstream 100 bases:
>100_bases ACGGCGGCTAGACGGCGGCCGGCCGCGCTTGGCGAGCGCCGCCCGTCGGCCTGGCGACCTCAGCGTTGCGCCTGCGCGGC CTGCGCCTGCGCCGCGTCGC
Product: putative thioesterase
Products: NA
Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase; Thioesterase Protein
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTTRPEPSPRSAYRHFLPIPTRWMDNDVYGHVNNVVYYSYFDTVVNEYLIRAGVLDVEHGETIGLVVETQCNYFAPLAFP QRLEAGLRVARLGASSVRYEIGLFAEGEAAPAAQGHFVHVYVARASRRPVPLPDALRAALAPLAAPLPPADGG
Sequences:
>Translated_153_residues MTTRPEPSPRSAYRHFLPIPTRWMDNDVYGHVNNVVYYSYFDTVVNEYLIRAGVLDVEHGETIGLVVETQCNYFAPLAFP QRLEAGLRVARLGASSVRYEIGLFAEGEAAPAAQGHFVHVYVARASRRPVPLPDALRAALAPLAAPLPPADGG >Mature_152_residues TTRPEPSPRSAYRHFLPIPTRWMDNDVYGHVNNVVYYSYFDTVVNEYLIRAGVLDVEHGETIGLVVETQCNYFAPLAFPQ RLEAGLRVARLGASSVRYEIGLFAEGEAAPAAQGHFVHVYVARASRRPVPLPDALRAALAPLAAPLPPADGG
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16774; Mature: 16643
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRPEPSPRSAYRHFLPIPTRWMDNDVYGHVNNVVYYSYFDTVVNEYLIRAGVLDVEHG CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCEECCCC ETIGLVVETQCNYFAPLAFPQRLEAGLRVARLGASSVRYEIGLFAEGEAAPAAQGHFVHV CEEEEEEECCCCEECCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCCCCCCEEEE YVARASRRPVPLPDALRAALAPLAAPLPPADGG EEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTRPEPSPRSAYRHFLPIPTRWMDNDVYGHVNNVVYYSYFDTVVNEYLIRAGVLDVEHG CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCEECCCC ETIGLVVETQCNYFAPLAFPQRLEAGLRVARLGASSVRYEIGLFAEGEAAPAAQGHFVHV CEEEEEEECCCCEECCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCCCCCCEEEE YVARASRRPVPLPDALRAALAPLAAPLPPADGG EEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA