Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027678

Identifier: 238027678

GI number: 238027678

Start: 2288986

End: 2289729

Strand: Direct

Name: 238027678

Synonym: bglu_1g20990

Alternate gene names: NA

Gene position: 2288986-2289729 (Clockwise)

Preceding gene: 238027677

Following gene: 238027679

Centisome position: 58.59

GC content: 69.09

Gene sequence:

>744_bases
ATGAACGACCACGACAAGCGCGAATTCATGGCCGAGCTGAACCTCGCCTTCGAAGCCGCCCGCCAGCCACTGCCGAGCCC
CCAGGTGCTCCGGCTGTTCTTCGACCGCCTGATGCCCTATCCGCTGCCGATGGTCGTGAACGCGATCCACCGGCACATCG
ACACGTGCGAGTTCGCCCCGACCCCCGCCGGCCTGCTCAAGCACCTCCCGAAGCCATCCGACGGCCGGCCCGGACCCGAC
GAAGCCTGGGCGATCGCCATCCGCAGCGCCGACGAGCGCGAGACGGTCGTGTGGACCCAGGAGATCGCCGAGGCCTGGAC
CATCGCGCAGCCCGTGTTCGACGGTGACGAGATCGGTGGCCGAATGGCCTTCAAGGACGCCTATACGCGCATTTGCGAGC
GAAATCGGCAGCTTGGCGTGGCCCCGCAGTGGTCGGTGAGCCAGGGATTCGACGCCGAGCGACGCCTCGAAGTCGTCCAG
CAAGCCGTGCAGGCCGGACGCCTCGCGCTGCCCCAGGCGCAGGCCGCTGTTCCCCTCCTGGCCGGGGAAAGCGATCCGGC
ACCAACTGTCGATGTCGAGGCGAATCTGGCGCGGTTGAAAGCGATGGTGGCGGGGATTGGGAGCGCGCGCGACCGTTCCG
CCGCCCAGAAAGCGGCCCTCGCACGTGAGGGCGCCGAGGACCTGGCCGACGCGAAGCGCGAGACGGCGCGGCGCGTGGCG
GCTTACGAAGGAGCTCAGGCATGA

Upstream 100 bases:

>100_bases
CGAAGAGCGCCGCCGCGCGATCAGCGAGGCGAACGCAGCCGCATTCCTCGCCGGTGTCCCGACCGACGATCCCAACGTCA
TCGACATGGAGAGCTGACCC

Downstream 100 bases:

>100_bases
ACTGCAAATCTGGGGATCTGGCGATTGTGGTGCATAGCCCATGGGCTCCCGAGAATATCGGGCGCGTTGTCCAAGTGGTA
CGTCGAAGGGTCGGAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNDHDKREFMAELNLAFEAARQPLPSPQVLRLFFDRLMPYPLPMVVNAIHRHIDTCEFAPTPAGLLKHLPKPSDGRPGPD
EAWAIAIRSADERETVVWTQEIAEAWTIAQPVFDGDEIGGRMAFKDAYTRICERNRQLGVAPQWSVSQGFDAERRLEVVQ
QAVQAGRLALPQAQAAVPLLAGESDPAPTVDVEANLARLKAMVAGIGSARDRSAAQKAALAREGAEDLADAKRETARRVA
AYEGAQA

Sequences:

>Translated_247_residues
MNDHDKREFMAELNLAFEAARQPLPSPQVLRLFFDRLMPYPLPMVVNAIHRHIDTCEFAPTPAGLLKHLPKPSDGRPGPD
EAWAIAIRSADERETVVWTQEIAEAWTIAQPVFDGDEIGGRMAFKDAYTRICERNRQLGVAPQWSVSQGFDAERRLEVVQ
QAVQAGRLALPQAQAAVPLLAGESDPAPTVDVEANLARLKAMVAGIGSARDRSAAQKAALAREGAEDLADAKRETARRVA
AYEGAQA
>Mature_247_residues
MNDHDKREFMAELNLAFEAARQPLPSPQVLRLFFDRLMPYPLPMVVNAIHRHIDTCEFAPTPAGLLKHLPKPSDGRPGPD
EAWAIAIRSADERETVVWTQEIAEAWTIAQPVFDGDEIGGRMAFKDAYTRICERNRQLGVAPQWSVSQGFDAERRLEVVQ
QAVQAGRLALPQAQAAVPLLAGESDPAPTVDVEANLARLKAMVAGIGSARDRSAAQKAALAREGAEDLADAKRETARRVA
AYEGAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27012; Mature: 27012

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDHDKREFMAELNLAFEAARQPLPSPQVLRLFFDRLMPYPLPMVVNAIHRHIDTCEFAP
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
TPAGLLKHLPKPSDGRPGPDEAWAIAIRSADERETVVWTQEIAEAWTIAQPVFDGDEIGG
CHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCC
RMAFKDAYTRICERNRQLGVAPQWSVSQGFDAERRLEVVQQAVQAGRLALPQAQAAVPLL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCE
AGESDPAPTVDVEANLARLKAMVAGIGSARDRSAAQKAALAREGAEDLADAKRETARRVA
ECCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AYEGAQA
HHCCCCC
>Mature Secondary Structure
MNDHDKREFMAELNLAFEAARQPLPSPQVLRLFFDRLMPYPLPMVVNAIHRHIDTCEFAP
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
TPAGLLKHLPKPSDGRPGPDEAWAIAIRSADERETVVWTQEIAEAWTIAQPVFDGDEIGG
CHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCC
RMAFKDAYTRICERNRQLGVAPQWSVSQGFDAERRLEVVQQAVQAGRLALPQAQAAVPLL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCE
AGESDPAPTVDVEANLARLKAMVAGIGSARDRSAAQKAALAREGAEDLADAKRETARRVA
ECCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AYEGAQA
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA