| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027659
Identifier: 238027659
GI number: 238027659
Start: 2270133
End: 2270771
Strand: Direct
Name: 238027659
Synonym: bglu_1g20800
Alternate gene names: NA
Gene position: 2270133-2270771 (Clockwise)
Preceding gene: 238027657
Following gene: 238027660
Centisome position: 58.11
GC content: 66.82
Gene sequence:
>639_bases ATGCGTGAACTCCCGATATTGTTTTCTGCGCCGATGGTACGGGCGATATCGCAGGGTCGCAAGTCGCAGACGCGCCGCCC GATGACCCCGCAACCGTATGACGACTACCGCCGGCTCGCCTGGATGTTCGCGAAGAACCGCGGAAGCTGGGGACCGCCCG GTGGTGCTCCCGATCCGGCATGGCTGGCTCGCTGCCCCTACGGCGGACCGGACGACCAGCTCTGGGTCCGCGAGACGTTC GTGGCATTCGGCCGCTGGGAGACGCGCTTCAGCGTGAAGAAAGGCCGGGACCAATGGCACTTCGTCGACATGACGCTCGA CACCGGCCGGCAGTACCGCTACGGCGGCGACTTGCCGAACGCGCAGCGTGCGGGCGCGACGCCGACCTGGTGGCGCCGGC CGGCGATCTTCATGCCACGCGCCGCCTCGCGCACGCAGCTCGAGGTGGTCCGCACCAGGATCGAACGCGTGCAGCAGATC AGCGAGGCCGATGCGATCGCGGAAGGAATGAGCACCGGCGACATCAATCCGGTGGGCTCATACGCCGAACTCTGGGATGG CCTCAACGCGGAGCGCGGCCTAGGTTGGAAGGCGAACCCGTGGGTGTGGGTGGTGGAATTTCGGAGGATGGAAGGATGA
Upstream 100 bases:
>100_bases CCAGTCCGAACTTTGCGCAGGTGGCCAGCGCAACACTGCCGTGACGAGTATCCCTGCTGCAAACGCCCCTATGAACATTG CCAGACCGGAGTAGCGACCC
Downstream 100 bases:
>100_bases GCACGGGACTGATGACGCCTGAGGACCTGGTGAAGGTCACCCACAAGAAACGATACAGCGCGCAAGCGAAGTGGTTCAAG GCGCAGTACGGCGTCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRELPILFSAPMVRAISQGRKSQTRRPMTPQPYDDYRRLAWMFAKNRGSWGPPGGAPDPAWLARCPYGGPDDQLWVRETF VAFGRWETRFSVKKGRDQWHFVDMTLDTGRQYRYGGDLPNAQRAGATPTWWRRPAIFMPRAASRTQLEVVRTRIERVQQI SEADAIAEGMSTGDINPVGSYAELWDGLNAERGLGWKANPWVWVVEFRRMEG
Sequences:
>Translated_212_residues MRELPILFSAPMVRAISQGRKSQTRRPMTPQPYDDYRRLAWMFAKNRGSWGPPGGAPDPAWLARCPYGGPDDQLWVRETF VAFGRWETRFSVKKGRDQWHFVDMTLDTGRQYRYGGDLPNAQRAGATPTWWRRPAIFMPRAASRTQLEVVRTRIERVQQI SEADAIAEGMSTGDINPVGSYAELWDGLNAERGLGWKANPWVWVVEFRRMEG >Mature_212_residues MRELPILFSAPMVRAISQGRKSQTRRPMTPQPYDDYRRLAWMFAKNRGSWGPPGGAPDPAWLARCPYGGPDDQLWVRETF VAFGRWETRFSVKKGRDQWHFVDMTLDTGRQYRYGGDLPNAQRAGATPTWWRRPAIFMPRAASRTQLEVVRTRIERVQQI SEADAIAEGMSTGDINPVGSYAELWDGLNAERGLGWKANPWVWVVEFRRMEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24390; Mature: 24390
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELPILFSAPMVRAISQGRKSQTRRPMTPQPYDDYRRLAWMFAKNRGSWGPPGGAPDPA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH WLARCPYGGPDDQLWVRETFVAFGRWETRFSVKKGRDQWHFVDMTLDTGRQYRYGGDLPN HEEECCCCCCCCCHHHHHHHHHHCCCCEEEHHCCCCCCEEEEEEEECCCCCEECCCCCCC AQRAGATPTWWRRPAIFMPRAASRTQLEVVRTRIERVQQISEADAIAEGMSTGDINPVGS CCCCCCCCCHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YAELWDGLNAERGLGWKANPWVWVVEFRRMEG HHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MRELPILFSAPMVRAISQGRKSQTRRPMTPQPYDDYRRLAWMFAKNRGSWGPPGGAPDPA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH WLARCPYGGPDDQLWVRETFVAFGRWETRFSVKKGRDQWHFVDMTLDTGRQYRYGGDLPN HEEECCCCCCCCCHHHHHHHHHHCCCCEEEHHCCCCCCEEEEEEEECCCCCEECCCCCCC AQRAGATPTWWRRPAIFMPRAASRTQLEVVRTRIERVQQISEADAIAEGMSTGDINPVGS CCCCCCCCCHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YAELWDGLNAERGLGWKANPWVWVVEFRRMEG HHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA