| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027652
Identifier: 238027652
GI number: 238027652
Start: 2262399
End: 2262866
Strand: Direct
Name: 238027652
Synonym: bglu_1g20730
Alternate gene names: NA
Gene position: 2262399-2262866 (Clockwise)
Preceding gene: 238027651
Following gene: 238027653
Centisome position: 57.91
GC content: 68.38
Gene sequence:
>468_bases ATGACCCAGCTCGCCGAAGCCTTCGACCGGGCCACGGGCGACAAGACCCCGTGGAACCCCTCGCGGCGCGCCGTCCGCCG CGTTCTCAACCCGCTGCCGGCGCCCACCGTCTGCCGCTTCTGCGGCGGCTCCGTGCACATCGTCCGGAACAGCGAAATCT ATGGCCGCGAATACGGGGAATGGCCGTGGGCCTTCCTGTGCCGTAAATGCGGGGCCTATGTCGGCATGCATCCGCAAACC GGCATCCCGCTCGGCACGCTCGCCGACGGTCCGACGCGTGCGGCGCGCAAGCGCGCGAAGGCAGCGTTTCAGCCCCTCTG GCAAACGCGCGTCATGACCAGATCCGCTGCGTACTCGTGGCTCGCAGGGCGTCTCGGGATAGCCGTCGGCGAGTGCCACG TCGGCTGGTTCGATGTCGCCATGTGCGACCGCGTCGTCGAGATCATCAACGAGGGACGCCCGCAATGA
Upstream 100 bases:
>100_bases GCAAGCGCGCGAACGCCCTGGTGCGAAGCGAGCGCGAGACCGAGGTCCACGTCTGCGCTCCGGTGGGCCGCGTCGTCCGT GGCGTCGAATGGGTGGGCAA
Downstream 100 bases:
>100_bases CCGCGACCCAAGAACCCGTGTGGCGCGCCCTGCTGCGCCTTGAGCACGCCGACCTGGCCGACGCCGATCGCAACCTGCTC CGTCCCGCGTTCGCGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTQLAEAFDRATGDKTPWNPSRRAVRRVLNPLPAPTVCRFCGGSVHIVRNSEIYGREYGEWPWAFLCRKCGAYVGMHPQT GIPLGTLADGPTRAARKRAKAAFQPLWQTRVMTRSAAYSWLAGRLGIAVGECHVGWFDVAMCDRVVEIINEGRPQ
Sequences:
>Translated_155_residues MTQLAEAFDRATGDKTPWNPSRRAVRRVLNPLPAPTVCRFCGGSVHIVRNSEIYGREYGEWPWAFLCRKCGAYVGMHPQT GIPLGTLADGPTRAARKRAKAAFQPLWQTRVMTRSAAYSWLAGRLGIAVGECHVGWFDVAMCDRVVEIINEGRPQ >Mature_154_residues TQLAEAFDRATGDKTPWNPSRRAVRRVLNPLPAPTVCRFCGGSVHIVRNSEIYGREYGEWPWAFLCRKCGAYVGMHPQTG IPLGTLADGPTRAARKRAKAAFQPLWQTRVMTRSAAYSWLAGRLGIAVGECHVGWFDVAMCDRVVEIINEGRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17259; Mature: 17128
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLAEAFDRATGDKTPWNPSRRAVRRVLNPLPAPTVCRFCGGSVHIVRNSEIYGREYGE CCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC WPWAFLCRKCGAYVGMHPQTGIPLGTLADGPTRAARKRAKAAFQPLWQTRVMTRSAAYSW CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGRLGIAVGECHVGWFDVAMCDRVVEIINEGRPQ HHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TQLAEAFDRATGDKTPWNPSRRAVRRVLNPLPAPTVCRFCGGSVHIVRNSEIYGREYGE CHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC WPWAFLCRKCGAYVGMHPQTGIPLGTLADGPTRAARKRAKAAFQPLWQTRVMTRSAAYSW CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGRLGIAVGECHVGWFDVAMCDRVVEIINEGRPQ HHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA