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The map label for this gene is nodJ [H]

Identifier: 238027476

GI number: 238027476

Start: 2061188

End: 2062018

Strand: Direct

Name: nodJ [H]

Synonym: bglu_1g18790

Alternate gene names: 238027476

Gene position: 2061188-2062018 (Clockwise)

Preceding gene: 238027475

Following gene: 238027480

Centisome position: 52.76

GC content: 69.31

Gene sequence:

>831_bases
ATGCCTACCGGCCACTCGCCGTCCCCCGCGGCGCCGCGATCGCGCGACGCCCGCATCACGATCGCGCTGCCCGCCAACGC
GACCAACTGGATCGCCGTCTGGCGCCGCAACTATCTGGTCTGGCGCAAGCTCGCGTTCGCGTCGATGATCGGCAACCTCG
CCGATCCGATGATCTACCTGTTCGGGCTGGGCCTCGGGCTCGGGCTGATGGTCGGCCACGTCGACGGCGTGTCGTACATC
GCCTTCCTGGCTGCCGGCACGACCGGCTCGAGCGTGATGATGTCGGCCAGCTTCGAGGCGATGTATTCGGCGTTTTCGCG
CATGCATGCGCAGCGCACCTGGGAGGCGATCATGCATACGCCGCTCGCGCTCGGCGACATCGTGCTCGGCGAGATCGTCT
GGGCCGCCAGCAAGGCGATGCTGTCGGGCACCGCGATCATGCTGGTCGCGGGCGCGCTCGGCTACGCATCGTTTCCCTCG
CTGCTGGCGGCCGTGCCGGCGATCGCGCTCGCCGGCCTGGCGTTCGCGAGCGTCACGATGATCGTGACGGCAGTGGCGCC
GTCCTACGACTTCTTCATGTTCTACCAGACGCTCGCGCTCACGCCGATGCTGCTGCTCTCGGGCGTGTTCTTTCCCGTCG
AGCAACTGCCCGCCGTCGCGCGCTATGCCGCCAACGCGCTGCCGCTCGCGAACGCCATCGACCTGATCCGGCCCGCCATG
CTGGGCCGGCCGGTCAGCGACGTCGCGCTGCATGCGGGCGTGCTGGCCGCCTACGCGCTGGTCGGCTTCCTCGTCTCGGC
CTGGCTGTTCCGCCGCCGCATGATGCGCTGA

Upstream 100 bases:

>100_bases
CGCTGAAGGGCCGGCCCGGCCTGCGCTACCTGCACCGGCCGGCAAATCTCGAAGACGTGTTCCTGCGGCTGACCGGCCGC
GACATGCAGGACTGACCGCC

Downstream 100 bases:

>100_bases
AGCAGCGGCGCGCGCGGTTGCGCCCGAGCGCGCCCCATTGCGCGGCGGCACCGTGCGCTGCCGCGCATGCCGCCCCGCCG
CGCCATCCCGCAACAGAGCG

Product: ABC-2 type transporter, NodJ family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MPTGHSPSPAAPRSRDARITIALPANATNWIAVWRRNYLVWRKLAFASMIGNLADPMIYLFGLGLGLGLMVGHVDGVSYI
AFLAAGTTGSSVMMSASFEAMYSAFSRMHAQRTWEAIMHTPLALGDIVLGEIVWAASKAMLSGTAIMLVAGALGYASFPS
LLAAVPAIALAGLAFASVTMIVTAVAPSYDFFMFYQTLALTPMLLLSGVFFPVEQLPAVARYAANALPLANAIDLIRPAM
LGRPVSDVALHAGVLAAYALVGFLVSAWLFRRRMMR

Sequences:

>Translated_276_residues
MPTGHSPSPAAPRSRDARITIALPANATNWIAVWRRNYLVWRKLAFASMIGNLADPMIYLFGLGLGLGLMVGHVDGVSYI
AFLAAGTTGSSVMMSASFEAMYSAFSRMHAQRTWEAIMHTPLALGDIVLGEIVWAASKAMLSGTAIMLVAGALGYASFPS
LLAAVPAIALAGLAFASVTMIVTAVAPSYDFFMFYQTLALTPMLLLSGVFFPVEQLPAVARYAANALPLANAIDLIRPAM
LGRPVSDVALHAGVLAAYALVGFLVSAWLFRRRMMR
>Mature_275_residues
PTGHSPSPAAPRSRDARITIALPANATNWIAVWRRNYLVWRKLAFASMIGNLADPMIYLFGLGLGLGLMVGHVDGVSYIA
FLAAGTTGSSVMMSASFEAMYSAFSRMHAQRTWEAIMHTPLALGDIVLGEIVWAASKAMLSGTAIMLVAGALGYASFPSL
LAAVPAIALAGLAFASVTMIVTAVAPSYDFFMFYQTLALTPMLLLSGVFFPVEQLPAVARYAANALPLANAIDLIRPAML
GRPVSDVALHAGVLAAYALVGFLVSAWLFRRRMMR

Specific function: Part of the ABC transporter complex nodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- InterPro:   IPR005981 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29401; Mature: 29270

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGHSPSPAAPRSRDARITIALPANATNWIAVWRRNYLVWRKLAFASMIGNLADPMIYL
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLGLGLGLMVGHVDGVSYIAFLAAGTTGSSVMMSASFEAMYSAFSRMHAQRTWEAIMHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLALGDIVLGEIVWAASKAMLSGTAIMLVAGALGYASFPSLLAAVPAIALAGLAFASVTM
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTAVAPSYDFFMFYQTLALTPMLLLSGVFFPVEQLPAVARYAANALPLANAIDLIRPAM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LGRPVSDVALHAGVLAAYALVGFLVSAWLFRRRMMR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTGHSPSPAAPRSRDARITIALPANATNWIAVWRRNYLVWRKLAFASMIGNLADPMIYL
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLGLGLGLMVGHVDGVSYIAFLAAGTTGSSVMMSASFEAMYSAFSRMHAQRTWEAIMHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLALGDIVLGEIVWAASKAMLSGTAIMLVAGALGYASFPSLLAAVPAIALAGLAFASVTM
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTAVAPSYDFFMFYQTLALTPMLLLSGVFFPVEQLPAVARYAANALPLANAIDLIRPAM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LGRPVSDVALHAGVLAAYALVGFLVSAWLFRRRMMR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]