| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027420
Identifier: 238027420
GI number: 238027420
Start: 1996076
End: 1996576
Strand: Direct
Name: 238027420
Synonym: bglu_1g18230
Alternate gene names: NA
Gene position: 1996076-1996576 (Clockwise)
Preceding gene: 238027414
Following gene: 238027425
Centisome position: 51.1
GC content: 69.46
Gene sequence:
>501_bases ATGACCGACCACGCCACCGATACCGACCCAGCCCAGGACGACAGCCCGATCCACGAGGACGGCCTCTGGCACGACAGCGG CTGGACCGCGCGCGTGATCAAGAACGAGGACGACGACGGCTGGGCCGTCGCGATGATCAAGGACGGCGAGGCAGAGCCGG CGCTGGTCGGCCCCTGGACGATGGGGCGCGACAAGAAGAATCCGAAGCCGCTCGACGCGGCGGCGTTCCGCACGCTGGTG AAAACCGCCTCGGAAGTGCTGCGCCGCCACGAGCAGCAGCGCGAGGCGATGCTGCACAAGGAGGTCACGGTGCACGTGGA GGCGCGCGCGGTGTCGGTGACGCTCGATATCGTGCCCGACGACGACGAGCCCTATGCCGTGCTGAAGGCGTTCGACGAAA CCGGCGAGCAGCTCGGCCAGGCCACCGTGCAGGCCGGCTTCCGCCTCGACAAGGCGAGCGCGACGCGCTGGGTCACCCGC GATTTCGAGCGCCCCGACTGA
Upstream 100 bases:
>100_bases CCGGCCGCACGGCCAGCTGCGGCGGCGCGCACCATTGCCGCCGATCGAAACGTTTACAATAGCCGCCCACCCAAGCCCCC GAACCCGCGCCCGACGCCTC
Downstream 100 bases:
>100_bases GCCGGCGGCTCGCCCCGCCCGCGCGGCGCGGCAGGCCCGGCCTCACTGCGCCTGCTGCAGCGCCTTTTCCAGCGCCTTCT TCTCCGCGCGGCGCTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTDHATDTDPAQDDSPIHEDGLWHDSGWTARVIKNEDDDGWAVAMIKDGEAEPALVGPWTMGRDKKNPKPLDAAAFRTLV KTASEVLRRHEQQREAMLHKEVTVHVEARAVSVTLDIVPDDDEPYAVLKAFDETGEQLGQATVQAGFRLDKASATRWVTR DFERPD
Sequences:
>Translated_166_residues MTDHATDTDPAQDDSPIHEDGLWHDSGWTARVIKNEDDDGWAVAMIKDGEAEPALVGPWTMGRDKKNPKPLDAAAFRTLV KTASEVLRRHEQQREAMLHKEVTVHVEARAVSVTLDIVPDDDEPYAVLKAFDETGEQLGQATVQAGFRLDKASATRWVTR DFERPD >Mature_165_residues TDHATDTDPAQDDSPIHEDGLWHDSGWTARVIKNEDDDGWAVAMIKDGEAEPALVGPWTMGRDKKNPKPLDAAAFRTLVK TASEVLRRHEQQREAMLHKEVTVHVEARAVSVTLDIVPDDDEPYAVLKAFDETGEQLGQATVQAGFRLDKASATRWVTRD FERPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18544; Mature: 18412
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHATDTDPAQDDSPIHEDGLWHDSGWTARVIKNEDDDGWAVAMIKDGEAEPALVGPWT CCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCEEEEEEECCCCCCCEECCCC MGRDKKNPKPLDAAAFRTLVKTASEVLRRHEQQREAMLHKEVTVHVEARAVSVTLDIVPD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECC DDEPYAVLKAFDETGEQLGQATVQAGFRLDKASATRWVTRDFERPD CCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHCCCCCCC >Mature Secondary Structure TDHATDTDPAQDDSPIHEDGLWHDSGWTARVIKNEDDDGWAVAMIKDGEAEPALVGPWT CCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCEEEEEEECCCCCCCEECCCC MGRDKKNPKPLDAAAFRTLVKTASEVLRRHEQQREAMLHKEVTVHVEARAVSVTLDIVPD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECC DDEPYAVLKAFDETGEQLGQATVQAGFRLDKASATRWVTRDFERPD CCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA