| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027413
Identifier: 238027413
GI number: 238027413
Start: 1988266
End: 1989639
Strand: Direct
Name: 238027413
Synonym: bglu_1g18090
Alternate gene names: NA
Gene position: 1988266-1989639 (Clockwise)
Preceding gene: 238027412
Following gene: 238027414
Centisome position: 50.9
GC content: 74.38
Gene sequence:
>1374_bases ATGACCGTCCCTACCCTGGATCGTCCGATCCGGCTCGGCGCCGGCGCCGGCTATTCCGGCGACCGCATCGAGCCCGCCGT CGAGCTGGCCGAGCACGGCGCGCTCGACTACCTGATCTTCGAATGCCTGGCCGAGCGCACCATCGCGATCGCGCAGCAGG CGCGCCGCGCCGATCCCGCGCTCGGCTACGACCCGCTGCTCGGCGCGCGGATGCGCGCGGTGCTGCCCGCGGCCGCCGCC GGCGGCGTGCGGATCATCTCGAACATGGGCGCCGCGAACCCGCTCGCAGCCGCGCGCGAGACCGCGCGGATCGCGGCCTC GCTGGGCCTGGGCCGGCTGCGCGTGGCGGCCGTGAGCGGCGACGACGTGCTCGCGCCGGTACTGGGCGGCGCGTTCCGCT TCCTCGAATCGGGCGACGCGGTGACCGACTATCGCGAGCGCATCGTGGCGGCCAACGCCTATCTCGGCGCCGAGCCGATC GTCGCCGCGCTGGCCGCCGGCGCCGACGTGGTGCTGACCGGCCGCGTGGCCGACCCGGCGCTGTTCGCCGCGCCGCTGAT CCATGCATTCGGCTGGCCGATGGACGACTGGACGCGTCTCGGGCAGGCCACCGTGGTGGGCCATCTGCTCGAATGCGCGG GCCAGGTCACGGGCGGCTATTTCGCCGATCCCGGCTGGCTGGACGTGCCGGATCTGGCGCGGCTCGGCTTTCCGATCGGC GAGGTGTCGGCCGACGGCGCCGCGACCATCACCAAGCTCGCGCGCGCCGGCGGCTGCGTGAGCGTGGACACCTGCAAGCA GCAGTTGCTCTACGAGATCCACGATCCGGCCTGCTACCTGCAGCCCGACGTGAGCGCCGATTTCAGCGCCGTGCGGGTCG TGCCCGACGGCCCCGACCGCGTGCGCGTGACGGGCGGCGCCGGCCGCGCGCGGCCCGACACGCTGAAGGTGTCGGTGGCC TACACCGACGGCCATGTCGGCGAAGGCCAGATCTCGTATGGCGGCCCCGGCGCAACGGCGCGCGCGCGGCTGGCCGGCCA GATCGTGCGCGAGCGCCTGGCGCTGACCGGCGTGGCGGTGAGCGAGCTGCGCATCGACCTGATCGGCGTGAACGCGCTGT ACGGCAACACGCTGGCCGGCCCGCGCGACGAGCCCGCCGAAGTGCGCCTGCGCGTGGCGGGCCGCACCGCCACGGCGGCC GACGCGGCGCGGATCGGCAACGAGATGGAAACGCTCTATACCAACGGGCCGGCCGGCGGCGGCGGCGTGACGAAGGCCGC GCGCGAGGTGCTGGCCGTGCAGTCGGTGCTGCTGCCGCGCGAGCTGGTGCGGCCCGTTTTCACGATGGTGGAGGCCGACG ATGCAACTGCGTGA
Upstream 100 bases:
>100_bases CGTCGTGATGACGATCGCCGCCGTCGCGCTCGGCGTGTTCCCGCTCTGACGCGATGACGGCGCGATCCCTGTCGTTGCGT GCGCAACCGGACCATTTACC
Downstream 100 bases:
>100_bases ACTCGCGCATTCGCGCACCGGCGACAAGGGCAACACGTTGAACGTCTCGGTGATCTGCCGCGATCCGCGGCACTACGCCC ATGTGCGCGAGCATCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTVPTLDRPIRLGAGAGYSGDRIEPAVELAEHGALDYLIFECLAERTIAIAQQARRADPALGYDPLLGARMRAVLPAAAA GGVRIISNMGAANPLAAARETARIAASLGLGRLRVAAVSGDDVLAPVLGGAFRFLESGDAVTDYRERIVAANAYLGAEPI VAALAAGADVVLTGRVADPALFAAPLIHAFGWPMDDWTRLGQATVVGHLLECAGQVTGGYFADPGWLDVPDLARLGFPIG EVSADGAATITKLARAGGCVSVDTCKQQLLYEIHDPACYLQPDVSADFSAVRVVPDGPDRVRVTGGAGRARPDTLKVSVA YTDGHVGEGQISYGGPGATARARLAGQIVRERLALTGVAVSELRIDLIGVNALYGNTLAGPRDEPAEVRLRVAGRTATAA DAARIGNEMETLYTNGPAGGGGVTKAAREVLAVQSVLLPRELVRPVFTMVEADDATA
Sequences:
>Translated_457_residues MTVPTLDRPIRLGAGAGYSGDRIEPAVELAEHGALDYLIFECLAERTIAIAQQARRADPALGYDPLLGARMRAVLPAAAA GGVRIISNMGAANPLAAARETARIAASLGLGRLRVAAVSGDDVLAPVLGGAFRFLESGDAVTDYRERIVAANAYLGAEPI VAALAAGADVVLTGRVADPALFAAPLIHAFGWPMDDWTRLGQATVVGHLLECAGQVTGGYFADPGWLDVPDLARLGFPIG EVSADGAATITKLARAGGCVSVDTCKQQLLYEIHDPACYLQPDVSADFSAVRVVPDGPDRVRVTGGAGRARPDTLKVSVA YTDGHVGEGQISYGGPGATARARLAGQIVRERLALTGVAVSELRIDLIGVNALYGNTLAGPRDEPAEVRLRVAGRTATAA DAARIGNEMETLYTNGPAGGGGVTKAAREVLAVQSVLLPRELVRPVFTMVEADDATA >Mature_456_residues TVPTLDRPIRLGAGAGYSGDRIEPAVELAEHGALDYLIFECLAERTIAIAQQARRADPALGYDPLLGARMRAVLPAAAAG GVRIISNMGAANPLAAARETARIAASLGLGRLRVAAVSGDDVLAPVLGGAFRFLESGDAVTDYRERIVAANAYLGAEPIV AALAAGADVVLTGRVADPALFAAPLIHAFGWPMDDWTRLGQATVVGHLLECAGQVTGGYFADPGWLDVPDLARLGFPIGE VSADGAATITKLARAGGCVSVDTCKQQLLYEIHDPACYLQPDVSADFSAVRVVPDGPDRVRVTGGAGRARPDTLKVSVAY TDGHVGEGQISYGGPGATARARLAGQIVRERLALTGVAVSELRIDLIGVNALYGNTLAGPRDEPAEVRLRVAGRTATAAD AARIGNEMETLYTNGPAGGGGVTKAAREVLAVQSVLLPRELVRPVFTMVEADDATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47253; Mature: 47122
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPTLDRPIRLGAGAGYSGDRIEPAVELAEHGALDYLIFECLAERTIAIAQQARRADPA CCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LGYDPLLGARMRAVLPAAAAGGVRIISNMGAANPLAAARETARIAASLGLGRLRVAAVSG CCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC DDVLAPVLGGAFRFLESGDAVTDYRERIVAANAYLGAEPIVAALAAGADVVLTGRVADPA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCHH LFAAPLIHAFGWPMDDWTRLGQATVVGHLLECAGQVTGGYFADPGWLDVPDLARLGFPIG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCC EVSADGAATITKLARAGGCVSVDTCKQQLLYEIHDPACYLQPDVSADFSAVRVVPDGPDR CCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCE VRVTGGAGRARPDTLKVSVAYTDGHVGEGQISYGGPGATARARLAGQIVRERLALTGVAV EEEECCCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEH SELRIDLIGVNALYGNTLAGPRDEPAEVRLRVAGRTATAADAARIGNEMETLYTNGPAGG HHEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHEEEECCCCCC GGVTKAAREVLAVQSVLLPRELVRPVFTMVEADDATA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVPTLDRPIRLGAGAGYSGDRIEPAVELAEHGALDYLIFECLAERTIAIAQQARRADPA CCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LGYDPLLGARMRAVLPAAAAGGVRIISNMGAANPLAAARETARIAASLGLGRLRVAAVSG CCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC DDVLAPVLGGAFRFLESGDAVTDYRERIVAANAYLGAEPIVAALAAGADVVLTGRVADPA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCHH LFAAPLIHAFGWPMDDWTRLGQATVVGHLLECAGQVTGGYFADPGWLDVPDLARLGFPIG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCC EVSADGAATITKLARAGGCVSVDTCKQQLLYEIHDPACYLQPDVSADFSAVRVVPDGPDR CCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCE VRVTGGAGRARPDTLKVSVAYTDGHVGEGQISYGGPGATARARLAGQIVRERLALTGVAV EEEECCCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEH SELRIDLIGVNALYGNTLAGPRDEPAEVRLRVAGRTATAADAARIGNEMETLYTNGPAGG HHEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHEEEECCCCCC GGVTKAAREVLAVQSVLLPRELVRPVFTMVEADDATA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA