| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027379
Identifier: 238027379
GI number: 238027379
Start: 1947818
End: 1947994
Strand: Direct
Name: 238027379
Synonym: bglu_1g17740
Alternate gene names: NA
Gene position: 1947818-1947994 (Clockwise)
Preceding gene: 238027376
Following gene: 238027384
Centisome position: 49.86
GC content: 60.45
Gene sequence:
>177_bases ATGCTCAAATGGGCCTTGATTTTCGCGGTGATCGCCATCGTCGCCGGACTGTTCGGATTCACCGGCATCGCCGCCGGCTC GGCGGCAATCGCCAAGTTCCTGTTCGGCCTGTTCCTCGTGCTCTGCATCGTCTTCCTGGTGATCGGCATGGTGGTGGCCA AGCGCGTCGTCAAATAG
Upstream 100 bases:
>100_bases TTGCATGGTGAACGGGCGGCCGGCACGGCACGCCGTGGCCGGCGTCGAGCTTCGACATCTCGCCCTTCCTCCACCCTTCA ACTCTCGGGAGCCAACCGCC
Downstream 100 bases:
>100_bases CGCCGTCCGAGGCCCGGGCTCGCGAGGCGGCGGATCCCGGGCCGGTTCGCCGCGCCGTCCCGCTACCCGGCGCGGTGGAC TCGACGCGCCCGCCGCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MLKWALIFAVIAIVAGLFGFTGIAAGSAAIAKFLFGLFLVLCIVFLVIGMVVAKRVVK
Sequences:
>Translated_58_residues MLKWALIFAVIAIVAGLFGFTGIAAGSAAIAKFLFGLFLVLCIVFLVIGMVVAKRVVK >Mature_58_residues MLKWALIFAVIAIVAGLFGFTGIAAGSAAIAKFLFGLFLVLCIVFLVIGMVVAKRVVK
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6100; Mature: 6100
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKWALIFAVIAIVAGLFGFTGIAAGSAAIAKFLFGLFLVLCIVFLVIGMVVAKRVVK CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKWALIFAVIAIVAGLFGFTGIAAGSAAIAKFLFGLFLVLCIVFLVIGMVVAKRVVK CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA