| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027359
Identifier: 238027359
GI number: 238027359
Start: 1926213
End: 1926875
Strand: Direct
Name: 238027359
Synonym: bglu_1g17490
Alternate gene names: NA
Gene position: 1926213-1926875 (Clockwise)
Preceding gene: 238027358
Following gene: 238027365
Centisome position: 49.31
GC content: 52.49
Gene sequence:
>663_bases GTGCGCAAGGAGCCGGCAGACATATACGCAATGATGATTGGCGAAGCGGCTAACCGGCTTGCCGATGCTGCAACATTTTT GGAATCGTTCACAAACGGCTGTAGCGCTGCCTATCTAGAGGCGTCCGCGCTTCAATTGCGAAAGGGGCTTGAGACACTTG CATTCGCAGCTATCGCCCCGAATGAATCGGCGTATGCCGCGCATCGAGCTAAGTTGGTAAAGAACCCAGATTTCACAAGG GATTACCACGCCAAGTGGATATTCAACGATCTAGCCAAGATCAACCCCGACTTCTATCCGTTACCGCTTCTACCGATTAA GAACATTACCCCAGCGGGTTCACTTAACAATCATTTCTATTTCGATCGAAAGGAGTCGGGATACCTTTCAAAAACGGACT TCATCAGCGTATATGATCGCCTCGGAAAGCACCTGCACGCCCGCAACCCGTGGAGTAAAGGAGACGCGCTTGCCGGGTTG TCTGAAATGGCCGCTAAGACGATAGAAGCCGTACACGGGCTTATTGAACTGCACGTCGCGTTTGTTCGTAAGCCCGGCTT CTCGGGAATATGGGTTGTCGAGATACCGCGCGGTTCGCTAGTGCCAAACATGATAGTGGGTCAAACGGACGGCCCGTATG CGGTGCAGTATCGGAAGCCATAG
Upstream 100 bases:
>100_bases AATATGCGGCAGGCAAGCCAGCGATGAATCAGTGACGAATCCGAACAGGCAACGGAGCCATCAGCAGAAAGCTACGATTT TCTAGCGATCAGGGGATATT
Downstream 100 bases:
>100_bases AAAAAGCCCGCACGTGCGGGCTTTTTTGTTGAACCGGGAAGCGTCAGATATGCAGAATCCGAATCCCAACGAACCACAGT ATCCATTGCGCGATCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRKEPADIYAMMIGEAANRLADAATFLESFTNGCSAAYLEASALQLRKGLETLAFAAIAPNESAYAAHRAKLVKNPDFTR DYHAKWIFNDLAKINPDFYPLPLLPIKNITPAGSLNNHFYFDRKESGYLSKTDFISVYDRLGKHLHARNPWSKGDALAGL SEMAAKTIEAVHGLIELHVAFVRKPGFSGIWVVEIPRGSLVPNMIVGQTDGPYAVQYRKP
Sequences:
>Translated_220_residues MRKEPADIYAMMIGEAANRLADAATFLESFTNGCSAAYLEASALQLRKGLETLAFAAIAPNESAYAAHRAKLVKNPDFTR DYHAKWIFNDLAKINPDFYPLPLLPIKNITPAGSLNNHFYFDRKESGYLSKTDFISVYDRLGKHLHARNPWSKGDALAGL SEMAAKTIEAVHGLIELHVAFVRKPGFSGIWVVEIPRGSLVPNMIVGQTDGPYAVQYRKP >Mature_220_residues MRKEPADIYAMMIGEAANRLADAATFLESFTNGCSAAYLEASALQLRKGLETLAFAAIAPNESAYAAHRAKLVKNPDFTR DYHAKWIFNDLAKINPDFYPLPLLPIKNITPAGSLNNHFYFDRKESGYLSKTDFISVYDRLGKHLHARNPWSKGDALAGL SEMAAKTIEAVHGLIELHVAFVRKPGFSGIWVVEIPRGSLVPNMIVGQTDGPYAVQYRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24368; Mature: 24368
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKEPADIYAMMIGEAANRLADAATFLESFTNGCSAAYLEASALQLRKGLETLAFAAIAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECC NESAYAAHRAKLVKNPDFTRDYHAKWIFNDLAKINPDFYPLPLLPIKNITPAGSLNNHFY CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE FDRKESGYLSKTDFISVYDRLGKHLHARNPWSKGDALAGLSEMAAKTIEAVHGLIELHVA EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVRKPGFSGIWVVEIPRGSLVPNMIVGQTDGPYAVQYRKP HHHCCCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCC >Mature Secondary Structure MRKEPADIYAMMIGEAANRLADAATFLESFTNGCSAAYLEASALQLRKGLETLAFAAIAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECC NESAYAAHRAKLVKNPDFTRDYHAKWIFNDLAKINPDFYPLPLLPIKNITPAGSLNNHFY CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE FDRKESGYLSKTDFISVYDRLGKHLHARNPWSKGDALAGLSEMAAKTIEAVHGLIELHVA EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVRKPGFSGIWVVEIPRGSLVPNMIVGQTDGPYAVQYRKP HHHCCCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA