| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027346
Identifier: 238027346
GI number: 238027346
Start: 1912193
End: 1912909
Strand: Direct
Name: 238027346
Synonym: bglu_1g17360
Alternate gene names: NA
Gene position: 1912193-1912909 (Clockwise)
Preceding gene: 238027345
Following gene: 238027347
Centisome position: 48.95
GC content: 69.32
Gene sequence:
>717_bases GTGGGACAGGCACAGGCTAACGAAGCACAGCGACAACAGCGGAACGGGATTTTGCGTGGCCGCGTGGTCGAGGTCGATCT GGCCGACCCGACCGCGCCCCGGTGCCGCGTTGCGGTCGGTGACCCCGACACCGACGGAGAAGGGCTCACGACGAACTGGC TTCCGTGGAAAGCCGCGCGTGCGGGCAAGGTCCGTACATGGAGCGCACCGAGCATCGGCGAGCCGGTGGTGATTGACTGC CCCGGCGGCGATCCGTCGCAAGGCGTGGTGTCAGGCGCCGAGTATTCCGACGACTATCCCGCACCGAGCACGAGCCCGAG CGAGCACATGATCGCGTTCGCTGACGGCGGCCGCATCGTCTACGACGACGCGAGTCACGCGCTCACGGTTGCGTTGCCTG CGGGCGCCACGATCCATTTAGCGGCGCCCGCGTCGGTGCTGATCGAAACGCAGGCGGCGACCGTCAAGGCCGAAACGGTC AAGATCGACGCGCCGCAGACGACATGCACGGGCGCGCTCACGGTCGAAGGGCCGTTCACGTTCCTGAGCGGCGCGACCGG GCAGGCGGGCGAGGGCGGGTCCGGCGCGGTCATGCAGATCCACGGGTCGGCCGATTTCACGGGCGACGTTACCGCAAGCG GCGTGAGTCTCGCGCACCATCTGCACCGGGCGCAGGGCGAATCCGCGCTCGTGTCGCCGCCGATCGCGGGGGCGTGA
Upstream 100 bases:
>100_bases CGCTGATTTTGTACCCGGCCTGAGCCCTGGCGTCATCGCTCGCCCATCGATCGCGCGCGCGGCACGATGGCGTATCGAAT GATTCAGCGGTGGGGCACAC
Downstream 100 bases:
>100_bases TGATCGGCATGAACGCACAGACCGGGCGATACGTTGAAAGCGTGGATCACCTGCGCCAGTCGGTCGCCATCATCTTTTCG ACGCCGTTGCGCACGCGCGT
Product: bacteriophage baseplate assembly protein V
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Assembly Protein V; Pyocin R2_PP; Baseplate Assembly Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Component; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; LOW QUALITY PROTEIN Baseplate Assembly Protein V; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage P2 Baseplate Assembly Protein GpV
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MGQAQANEAQRQQRNGILRGRVVEVDLADPTAPRCRVAVGDPDTDGEGLTTNWLPWKAARAGKVRTWSAPSIGEPVVIDC PGGDPSQGVVSGAEYSDDYPAPSTSPSEHMIAFADGGRIVYDDASHALTVALPAGATIHLAAPASVLIETQAATVKAETV KIDAPQTTCTGALTVEGPFTFLSGATGQAGEGGSGAVMQIHGSADFTGDVTASGVSLAHHLHRAQGESALVSPPIAGA
Sequences:
>Translated_238_residues MGQAQANEAQRQQRNGILRGRVVEVDLADPTAPRCRVAVGDPDTDGEGLTTNWLPWKAARAGKVRTWSAPSIGEPVVIDC PGGDPSQGVVSGAEYSDDYPAPSTSPSEHMIAFADGGRIVYDDASHALTVALPAGATIHLAAPASVLIETQAATVKAETV KIDAPQTTCTGALTVEGPFTFLSGATGQAGEGGSGAVMQIHGSADFTGDVTASGVSLAHHLHRAQGESALVSPPIAGA >Mature_237_residues GQAQANEAQRQQRNGILRGRVVEVDLADPTAPRCRVAVGDPDTDGEGLTTNWLPWKAARAGKVRTWSAPSIGEPVVIDCP GGDPSQGVVSGAEYSDDYPAPSTSPSEHMIAFADGGRIVYDDASHALTVALPAGATIHLAAPASVLIETQAATVKAETVK IDAPQTTCTGALTVEGPFTFLSGATGQAGEGGSGAVMQIHGSADFTGDVTASGVSLAHHLHRAQGESALVSPPIAGA
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24156; Mature: 24025
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAQANEAQRQQRNGILRGRVVEVDLADPTAPRCRVAVGDPDTDGEGLTTNWLPWKAAR CCCCCHHHHHHHHHCCCEECEEEEEECCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCC AGKVRTWSAPSIGEPVVIDCPGGDPSQGVVSGAEYSDDYPAPSTSPSEHMIAFADGGRIV CCCEEEECCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCEEE YDDASHALTVALPAGATIHLAAPASVLIETQAATVKAETVKIDAPQTTCTGALTVEGPFT EECCCCEEEEEECCCCEEEEECCCEEEEEECCCEEEEEEEEEECCCCEEEEEEEECCCEE FLSGATGQAGEGGSGAVMQIHGSADFTGDVTASGVSLAHHLHRAQGESALVSPPIAGA EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure GQAQANEAQRQQRNGILRGRVVEVDLADPTAPRCRVAVGDPDTDGEGLTTNWLPWKAAR CCCCHHHHHHHHHCCCEECEEEEEECCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCC AGKVRTWSAPSIGEPVVIDCPGGDPSQGVVSGAEYSDDYPAPSTSPSEHMIAFADGGRIV CCCEEEECCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCEEE YDDASHALTVALPAGATIHLAAPASVLIETQAATVKAETVKIDAPQTTCTGALTVEGPFT EECCCCEEEEEECCCCEEEEECCCEEEEEECCCEEEEEEEEEECCCCEEEEEEEECCCEE FLSGATGQAGEGGSGAVMQIHGSADFTGDVTASGVSLAHHLHRAQGESALVSPPIAGA EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA