| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027343
Identifier: 238027343
GI number: 238027343
Start: 1910547
End: 1910987
Strand: Direct
Name: 238027343
Synonym: bglu_1g17330
Alternate gene names: NA
Gene position: 1910547-1910987 (Clockwise)
Preceding gene: 238027342
Following gene: 238027344
Centisome position: 48.91
GC content: 65.99
Gene sequence:
>441_bases ATGAATCCGCTCGTCGTGAAGCTGCTGGCGATCGGCGCGGCTGCGCTCGCTGCATGGGGCGGCGTTCGCTATGTCCAATC GCTTCGTGCCGACGTTGCGGACGCACAGCAAGCCGCACGCGCTGCGCGCGATCAGGTGGCGGTCCGCGATCAGACGATTG CGCGACTTGCAGCAAGCGCGCAGTCGAACGCCGAACTACAACGGCGGCTCGATACGACGCGCACGCAGATCGGCGCGGCG CAGGCCCGCATCGAAGCCGCAACCCGGAGAATCCTCAATGAAACCCCCGAATCTCGCGCATGGGCTGATACTGTCCTGCC TGCTGACGTTGCCCGCCTGCAAGCAAGCCCCGATCTCACCGGCGCCTGTGATTACCTTCAACGCGTGCCAGCCGGTGACG CGGTGCGCGCTGCCTGCGATGGCACCGCAAACGAACCGTGA
Upstream 100 bases:
>100_bases GGTGGGTGCATATCGGCCTCACTGCCGACGGCGTGAAACCGCGTCGGCAGGTGCTGACCGCTCATTTCAGCGGCGAAACC GCGTCGTACACGGTGGGCGC
Downstream 100 bases:
>100_bases CATGAATGCGGCGCTGCTGATGACGAAGGCCGCGTGGGCGCAATGCGCGGCGACAGTCGATGCGATTGCCGACTGCCAGG CGCGCGCCGAGCGCGCGGCT
Product: Protein lysB
Products: NA
Alternate protein names: Phage-Encoded Lipoprotein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNPLVVKLLAIGAAALAAWGGVRYVQSLRADVADAQQAARAARDQVAVRDQTIARLAASAQSNAELQRRLDTTRTQIGAA QARIEAATRRILNETPESRAWADTVLPADVARLQASPDLTGACDYLQRVPAGDAVRAACDGTANEP
Sequences:
>Translated_146_residues MNPLVVKLLAIGAAALAAWGGVRYVQSLRADVADAQQAARAARDQVAVRDQTIARLAASAQSNAELQRRLDTTRTQIGAA QARIEAATRRILNETPESRAWADTVLPADVARLQASPDLTGACDYLQRVPAGDAVRAACDGTANEP >Mature_146_residues MNPLVVKLLAIGAAALAAWGGVRYVQSLRADVADAQQAARAARDQVAVRDQTIARLAASAQSNAELQRRLDTTRTQIGAA QARIEAATRRILNETPESRAWADTVLPADVARLQASPDLTGACDYLQRVPAGDAVRAACDGTANEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15401; Mature: 15401
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLVVKLLAIGAAALAAWGGVRYVQSLRADVADAQQAARAARDQVAVRDQTIARLAASA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSNAELQRRLDTTRTQIGAAQARIEAATRRILNETPESRAWADTVLPADVARLQASPDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC GACDYLQRVPAGDAVRAACDGTANEP HHHHHHHHCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MNPLVVKLLAIGAAALAAWGGVRYVQSLRADVADAQQAARAARDQVAVRDQTIARLAASA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSNAELQRRLDTTRTQIGAAQARIEAATRRILNETPESRAWADTVLPADVARLQASPDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC GACDYLQRVPAGDAVRAACDGTANEP HHHHHHHHCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA