| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027272
Identifier: 238027272
GI number: 238027272
Start: 1823719
End: 1825248
Strand: Reverse
Name: 238027272
Synonym: bglu_1g16590
Alternate gene names: NA
Gene position: 1825248-1823719 (Counterclockwise)
Preceding gene: 238027273
Following gene: 238027270
Centisome position: 46.72
GC content: 70.52
Gene sequence:
>1530_bases ATGAAAAAATCTGTTCGCACTACTTCGCATCTGAAGCTGGCTTCCTTCCTACTGGCCGCCTGCGCGTCGTTCGCGCAGGC GCAAACTCCGTCGCCCTCGACGCCTGCCACCGGCGCCGCGTCCGAGAACATCAATCAATTGATCGTCAAGCTGAAACCGG CGGCGGCCGCGGCGCGCGGCAGCACGTCGATCACGACGGCGGCAGCCGACATTCACGGCGTGATCGACCGCGTGCTTGCC GCGCGCCGCGCCCGTGCGACGACGCGCGCGTTCGGCGCCGCAGCGGCGTCGGCGCCGGGCAACGCGGGCGACCCCGCCGC CAACATCAGCGTAAAGCGCGAGATGGCGGACGGCGCGACCGTGCTGCGGCTGCAGCGCAGCCTGCCGGCCGCCGATGCCG CCGCGCTGGCGAATGACTTCGCGGCCGACGCCGCGGTCGAATATGCCGAGCCCGACGCACACATGCATGCGCTGCTGGTG CCGAACGACACGCGTTACGGTGAGCAATGGGGCTACGCGAGCGGTATCGGCGGCGCCAACCTGCCGAAGGCATGGGATAT CACGACCGGCTCCGCGAACGTGGTGGTGGCGGTGGTCGACACCGGCTACCGCCCCCACTCCGACCTCGCGGCGAATGTGC TGCCGGGCTACGACTTCATCTCGGACCCGAACAGCGCGAACGACGGCAACGGCCGCGACAGCGACGCGACGGACCCGGGC GACTGGGTCTCGCAGAGCGAGGTCGACGATCCGGACGGTCCGTTCTACCGCTGCCAGGTCGACCAGTACGGCCGCACCTT CGCGAGCGACAGCTCATGGCACGGCACTCACGTGGCCGGCACGATCGGCGCGGTCTCGAACAACGGACGCGGCGTGGCCG GCATCTCGTGGAAGGGGAAAATCCTGCCCGTGCGCGTGCTCGGCAAGTGCGGCGGCGCGCTCAGCGACATCGCGGACGGC ATGCGCTGGGCGGCTGGCCTGAGCGTGCCGGGCGTGCCCGCCAACCGCACGCCGGCGCGCGTGCTGAACTTCAGCCTCGG CGGCGGCGGCAGCTGCAGCCGCACGTACCAGAGCGCGATCAATGCGGTGGTGGCTGCCGGCGCGACGGTGGTGGTCGCGG CCGGCAACGAAGCCGCGCAGGTCTCCACCTCGCAGCCGGCCAACTGTCAGAACGTGATCGCCGTGGCCGCCACCGACGTG AACGGACGTCGCGCGAGCTTCAGCAACTACGGATCGGCGGTGAAGATCGCCGCACCGGGCGTCAACATCCTCTCGACGCT CAACAGCGGCAAGACCTCGCCGGCCGCCGACAGTTACGCGTCCTACAACGGTACCAGCATGGCCACGCCCCATGTGGCCG GCACCGTCGCGCTGATGCTGGCGGCGAACGGCTCGCTCACGCCCGCGCAGGTGTTGCAGAAACTGCAGGCATCGGCGCGG CCGTTCCCGAGCGGCTCGGGCTGCTCCACCAGCACCTGCGGCGCGGGCCTGCTCGACGCGGGCGCGGCAGTCAGCGCGGC GCGCCAGTAA
Upstream 100 bases:
>100_bases TCGCGCGCCGGCATCACCGCCCTCCGGCAAAGCAGCAACGCAGTCCAGCAGCGGCCTGATTCCCACCACGCATTCCATTC GATCCTATCTGGAGATATGC
Downstream 100 bases:
>100_bases CGGGCGGTACGCGCGGTCGAGCCCGGCCGCCGGGCGTCATCGCCGGCGCGGACCATTCGGTGCGCCGCCGGTCGAGCGGT CGGGAGCGTTGGCGAAAGAC
Product: Serine metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARGSTSITTAAADIHGVIDRVLA ARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGATVLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLV PNDTRYGEQWGYASGIGGANLPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGKILPVRVLGKCGGALSDIADG MRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAINAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDV NGRRASFSNYGSAVKIAAPGVNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR PFPSGSGCSTSTCGAGLLDAGAAVSAARQ
Sequences:
>Translated_509_residues MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARGSTSITTAAADIHGVIDRVLA ARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGATVLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLV PNDTRYGEQWGYASGIGGANLPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGKILPVRVLGKCGGALSDIADG MRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAINAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDV NGRRASFSNYGSAVKIAAPGVNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR PFPSGSGCSTSTCGAGLLDAGAAVSAARQ >Mature_509_residues MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARGSTSITTAAADIHGVIDRVLA ARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGATVLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLV PNDTRYGEQWGYASGIGGANLPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGKILPVRVLGKCGGALSDIADG MRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAINAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDV NGRRASFSNYGSAVKIAAPGVNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR PFPSGSGCSTSTCGAGLLDAGAAVSAARQ
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320775, Length=221, Percent_Identity=35.2941176470588, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324576, Length=203, Percent_Identity=35.4679802955665, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=211, Percent_Identity=33.175355450237, Blast_Score=78, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 51234; Mature: 51234
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHEEEEEECCHHHHCCC STSITTAAADIHGVIDRVLAARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGAT CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHCCHH VLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLVPNDTRYGEQWGYASGIGGAN HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC LPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG CCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGK CCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCC ILPVRVLGKCGGALSDIADGMRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAI EEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH NAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDVNGRRASFSNYGSAVKIAAPG HHHHHCCCEEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCC VNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCC PFPSGSGCSTSTCGAGLLDAGAAVSAARQ CCCCCCCCCCCCCCCCHHHCCHHHHHCCC >Mature Secondary Structure MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHEEEEEECCHHHHCCC STSITTAAADIHGVIDRVLAARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGAT CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHCCHH VLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLVPNDTRYGEQWGYASGIGGAN HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC LPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG CCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGK CCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCC ILPVRVLGKCGGALSDIADGMRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAI EEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH NAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDVNGRRASFSNYGSAVKIAAPG HHHHHCCCEEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCC VNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCC PFPSGSGCSTSTCGAGLLDAGAAVSAARQ CCCCCCCCCCCCCCCCHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]