Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027272

Identifier: 238027272

GI number: 238027272

Start: 1823719

End: 1825248

Strand: Reverse

Name: 238027272

Synonym: bglu_1g16590

Alternate gene names: NA

Gene position: 1825248-1823719 (Counterclockwise)

Preceding gene: 238027273

Following gene: 238027270

Centisome position: 46.72

GC content: 70.52

Gene sequence:

>1530_bases
ATGAAAAAATCTGTTCGCACTACTTCGCATCTGAAGCTGGCTTCCTTCCTACTGGCCGCCTGCGCGTCGTTCGCGCAGGC
GCAAACTCCGTCGCCCTCGACGCCTGCCACCGGCGCCGCGTCCGAGAACATCAATCAATTGATCGTCAAGCTGAAACCGG
CGGCGGCCGCGGCGCGCGGCAGCACGTCGATCACGACGGCGGCAGCCGACATTCACGGCGTGATCGACCGCGTGCTTGCC
GCGCGCCGCGCCCGTGCGACGACGCGCGCGTTCGGCGCCGCAGCGGCGTCGGCGCCGGGCAACGCGGGCGACCCCGCCGC
CAACATCAGCGTAAAGCGCGAGATGGCGGACGGCGCGACCGTGCTGCGGCTGCAGCGCAGCCTGCCGGCCGCCGATGCCG
CCGCGCTGGCGAATGACTTCGCGGCCGACGCCGCGGTCGAATATGCCGAGCCCGACGCACACATGCATGCGCTGCTGGTG
CCGAACGACACGCGTTACGGTGAGCAATGGGGCTACGCGAGCGGTATCGGCGGCGCCAACCTGCCGAAGGCATGGGATAT
CACGACCGGCTCCGCGAACGTGGTGGTGGCGGTGGTCGACACCGGCTACCGCCCCCACTCCGACCTCGCGGCGAATGTGC
TGCCGGGCTACGACTTCATCTCGGACCCGAACAGCGCGAACGACGGCAACGGCCGCGACAGCGACGCGACGGACCCGGGC
GACTGGGTCTCGCAGAGCGAGGTCGACGATCCGGACGGTCCGTTCTACCGCTGCCAGGTCGACCAGTACGGCCGCACCTT
CGCGAGCGACAGCTCATGGCACGGCACTCACGTGGCCGGCACGATCGGCGCGGTCTCGAACAACGGACGCGGCGTGGCCG
GCATCTCGTGGAAGGGGAAAATCCTGCCCGTGCGCGTGCTCGGCAAGTGCGGCGGCGCGCTCAGCGACATCGCGGACGGC
ATGCGCTGGGCGGCTGGCCTGAGCGTGCCGGGCGTGCCCGCCAACCGCACGCCGGCGCGCGTGCTGAACTTCAGCCTCGG
CGGCGGCGGCAGCTGCAGCCGCACGTACCAGAGCGCGATCAATGCGGTGGTGGCTGCCGGCGCGACGGTGGTGGTCGCGG
CCGGCAACGAAGCCGCGCAGGTCTCCACCTCGCAGCCGGCCAACTGTCAGAACGTGATCGCCGTGGCCGCCACCGACGTG
AACGGACGTCGCGCGAGCTTCAGCAACTACGGATCGGCGGTGAAGATCGCCGCACCGGGCGTCAACATCCTCTCGACGCT
CAACAGCGGCAAGACCTCGCCGGCCGCCGACAGTTACGCGTCCTACAACGGTACCAGCATGGCCACGCCCCATGTGGCCG
GCACCGTCGCGCTGATGCTGGCGGCGAACGGCTCGCTCACGCCCGCGCAGGTGTTGCAGAAACTGCAGGCATCGGCGCGG
CCGTTCCCGAGCGGCTCGGGCTGCTCCACCAGCACCTGCGGCGCGGGCCTGCTCGACGCGGGCGCGGCAGTCAGCGCGGC
GCGCCAGTAA

Upstream 100 bases:

>100_bases
TCGCGCGCCGGCATCACCGCCCTCCGGCAAAGCAGCAACGCAGTCCAGCAGCGGCCTGATTCCCACCACGCATTCCATTC
GATCCTATCTGGAGATATGC

Downstream 100 bases:

>100_bases
CGGGCGGTACGCGCGGTCGAGCCCGGCCGCCGGGCGTCATCGCCGGCGCGGACCATTCGGTGCGCCGCCGGTCGAGCGGT
CGGGAGCGTTGGCGAAAGAC

Product: Serine metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARGSTSITTAAADIHGVIDRVLA
ARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGATVLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLV
PNDTRYGEQWGYASGIGGANLPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG
DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGKILPVRVLGKCGGALSDIADG
MRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAINAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDV
NGRRASFSNYGSAVKIAAPGVNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR
PFPSGSGCSTSTCGAGLLDAGAAVSAARQ

Sequences:

>Translated_509_residues
MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARGSTSITTAAADIHGVIDRVLA
ARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGATVLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLV
PNDTRYGEQWGYASGIGGANLPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG
DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGKILPVRVLGKCGGALSDIADG
MRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAINAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDV
NGRRASFSNYGSAVKIAAPGVNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR
PFPSGSGCSTSTCGAGLLDAGAAVSAARQ
>Mature_509_residues
MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARGSTSITTAAADIHGVIDRVLA
ARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGATVLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLV
PNDTRYGEQWGYASGIGGANLPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG
DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGKILPVRVLGKCGGALSDIADG
MRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAINAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDV
NGRRASFSNYGSAVKIAAPGVNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR
PFPSGSGCSTSTCGAGLLDAGAAVSAARQ

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320775, Length=221, Percent_Identity=35.2941176470588, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324576, Length=203, Percent_Identity=35.4679802955665, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6319893, Length=211, Percent_Identity=33.175355450237, Blast_Score=78, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007280
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500 [H]

Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]

EC number: NA

Molecular weight: Translated: 51234; Mature: 51234

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHEEEEEECCHHHHCCC
STSITTAAADIHGVIDRVLAARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGAT
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHCCHH
VLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLVPNDTRYGEQWGYASGIGGAN
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
LPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG
CCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGK
CCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCC
ILPVRVLGKCGGALSDIADGMRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAI
EEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
NAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDVNGRRASFSNYGSAVKIAAPG
HHHHHCCCEEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCC
VNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCC
PFPSGSGCSTSTCGAGLLDAGAAVSAARQ
CCCCCCCCCCCCCCCCHHHCCHHHHHCCC
>Mature Secondary Structure
MKKSVRTTSHLKLASFLLAACASFAQAQTPSPSTPATGAASENINQLIVKLKPAAAAARG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHEEEEEECCHHHHCCC
STSITTAAADIHGVIDRVLAARRARATTRAFGAAAASAPGNAGDPAANISVKREMADGAT
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHCCHH
VLRLQRSLPAADAAALANDFAADAAVEYAEPDAHMHALLVPNDTRYGEQWGYASGIGGAN
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
LPKAWDITTGSANVVVAVVDTGYRPHSDLAANVLPGYDFISDPNSANDGNGRDSDATDPG
CCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DWVSQSEVDDPDGPFYRCQVDQYGRTFASDSSWHGTHVAGTIGAVSNNGRGVAGISWKGK
CCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCC
ILPVRVLGKCGGALSDIADGMRWAAGLSVPGVPANRTPARVLNFSLGGGGSCSRTYQSAI
EEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
NAVVAAGATVVVAAGNEAAQVSTSQPANCQNVIAVAATDVNGRRASFSNYGSAVKIAAPG
HHHHHCCCEEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCC
VNILSTLNSGKTSPAADSYASYNGTSMATPHVAGTVALMLAANGSLTPAQVLQKLQASAR
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCC
PFPSGSGCSTSTCGAGLLDAGAAVSAARQ
CCCCCCCCCCCCCCCCHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2187155; 12024217 [H]