| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is glgA [H]
Identifier: 238027271
GI number: 238027271
Start: 1821958
End: 1823580
Strand: Direct
Name: glgA [H]
Synonym: bglu_1g16580
Alternate gene names: 238027271
Gene position: 1821958-1823580 (Clockwise)
Preceding gene: 238027266
Following gene: 238027274
Centisome position: 46.64
GC content: 71.97
Gene sequence:
>1623_bases TTGTCGCTTAACGTCCTGATGGTCGCCGCCGAAGCCGCGCCACTTGCCAAGAGTGGTGGCCTCGGCGACATGGTCAGCGC TTCGGCGAGCGCGCTGCGGCAACGCGGCGTCGACGCGTCGATCCTGCTGCCCGGTTACGAATCCGCCTTCGATCACGCGG TCGCGCCGACGCCGCTGGGCACCATCCGCGACCTGCCCGGCGGCGACGCGCGGTTGTGGCGCGCCGCGATGCCTGACTCC GACGTGCCGGTCCTGCTGCTCGAAATGAAGCATCTGTACGGGCGGCGCGGCAGCGGCCTCTATCAGGACGAATGCGGGCG CGACTACGTCGACAACTTCGTGCGCTTCGCCTCGCTGTCGGCCGCCGCCGCGCGGATCGCCTCGGGCGTGCGCGGCGTCA AGCGCCCGCGCATCGTCCATGCGCACGACTGGCATACCGGCCTCACGCCGCTCCTGATGAAGCTGGCCGGCTCGCCTGCG CGCAGCATCTTCACGATCCACAATCTCGCGTTCCAGGGCAACTATCCGACGGGGCTCGCGCCCTATGCCGGCATTCCGTC CGAGCTGCTGGCGCCGGCCCCGCACGAGCCGCACAGCATCGAATTCTATGGCGCGCTGAGCTGCATGAAGGCGGCGATCG TCTACGCGGACCGCCTCACCGCGGTGAGCGAGCGCTATGCGCAGGAGATCCTCACGCCGCGCTTCGGCAACCGCATGGAG GGCGTGCTGGCCGCGCACGCCGGCAAGCTGTCGGGCATCGTCAACGGCATCGACGACGCGCTCTGGAATCCGCGCGACGA CGCCGCGCTCGCGCAGGGCTATGGCGTGGACGATCTGGTCGGCAAGCACGCCTGCAAGCGCGAACTGCAGCAGAGCTACG GGCTGCAGGTCGACCCGTTCGCGCCGCTGGTGGCGATCGGCAGCCGGCTCACCGGGCAGAAGCTGGCCGACGTGGTGTGC GAGGCGATTCCGGCCGCGCTCGCGCGCTGGCCGCGTGCGCAGTTCGCGGTGCTGGGGCAGGGCGACGCGGCGATCGAGGC CGAACTGCGCCGGCTGGCCGCGCAGTGGCCGGGGCGGCTGGGCGTCCATATCGGCTACGACGAGACGCGCGCGCACCGGC TGCACGCGGGCGCCGACATCCTGCTGCATGCGAGCCGCTTCGAGCCGTGCGGGCTGACGCAACTCTATGCGATGCGCTAC GGCACCGTGCCGGTGGCCTCGCGAGTGGGTGGCCTGGCCGATACGATCGTCGACTGCGCGCCAGCCGCGCAGGACGCCGA GGCGGCGCCGGTCGGCGAGGCGACCGGCTTCCTGTTCGACGGTGAGCGGGTGGGGGACGTGGTGCAGGCGCTGGGCCGTG CGTTCGAGCTGTTCGCACAGCCGAAATCGTGGCGCACGCTGCAGCGCAACGCGATGAATCGCGATTCGAGCTGGGAAGGC CCGGCCGCACGCTACCTCGCGCTCTATTGCGAGTTGGCCGGCCTGCCGGCGCCGCGCGCCGCCGCCATCCAGGCGCCGGC CGCGCAGCTCGAACCGGCCGCGATCGAGCGAGCCGCACCGCGCGTGAACGCGGTGGCGACGCGGCGCGCCCGCGTGCCGG CCGAGGTGCGCAGCAGCGCCTGA
Upstream 100 bases:
>100_bases GGAGCCGCCATGCCGCGCGATGGTTGCCCGGACCGCGTGCCGCCGGCGTGTGCCGGCCGCGCACGCTGCACTCGATCAAC CGAACTCAGTGGGAGTTACC
Downstream 100 bases:
>100_bases GCCGGGCAAGTGCCCGGCCGTTAAGGGGCGGCCGCACGGTCTTTCGCCAACGCTCCCGACCGCTCGACCGGCGGCGCACC GAATGGTCCGCGCCGGCGAT
Product: glycogen synthase
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSLNVLMVAAEAAPLAKSGGLGDMVSASASALRQRGVDASILLPGYESAFDHAVAPTPLGTIRDLPGGDARLWRAAMPDS DVPVLLLEMKHLYGRRGSGLYQDECGRDYVDNFVRFASLSAAAARIASGVRGVKRPRIVHAHDWHTGLTPLLMKLAGSPA RSIFTIHNLAFQGNYPTGLAPYAGIPSELLAPAPHEPHSIEFYGALSCMKAAIVYADRLTAVSERYAQEILTPRFGNRME GVLAAHAGKLSGIVNGIDDALWNPRDDAALAQGYGVDDLVGKHACKRELQQSYGLQVDPFAPLVAIGSRLTGQKLADVVC EAIPAALARWPRAQFAVLGQGDAAIEAELRRLAAQWPGRLGVHIGYDETRAHRLHAGADILLHASRFEPCGLTQLYAMRY GTVPVASRVGGLADTIVDCAPAAQDAEAAPVGEATGFLFDGERVGDVVQALGRAFELFAQPKSWRTLQRNAMNRDSSWEG PAARYLALYCELAGLPAPRAAAIQAPAAQLEPAAIERAAPRVNAVATRRARVPAEVRSSA
Sequences:
>Translated_540_residues MSLNVLMVAAEAAPLAKSGGLGDMVSASASALRQRGVDASILLPGYESAFDHAVAPTPLGTIRDLPGGDARLWRAAMPDS DVPVLLLEMKHLYGRRGSGLYQDECGRDYVDNFVRFASLSAAAARIASGVRGVKRPRIVHAHDWHTGLTPLLMKLAGSPA RSIFTIHNLAFQGNYPTGLAPYAGIPSELLAPAPHEPHSIEFYGALSCMKAAIVYADRLTAVSERYAQEILTPRFGNRME GVLAAHAGKLSGIVNGIDDALWNPRDDAALAQGYGVDDLVGKHACKRELQQSYGLQVDPFAPLVAIGSRLTGQKLADVVC EAIPAALARWPRAQFAVLGQGDAAIEAELRRLAAQWPGRLGVHIGYDETRAHRLHAGADILLHASRFEPCGLTQLYAMRY GTVPVASRVGGLADTIVDCAPAAQDAEAAPVGEATGFLFDGERVGDVVQALGRAFELFAQPKSWRTLQRNAMNRDSSWEG PAARYLALYCELAGLPAPRAAAIQAPAAQLEPAAIERAAPRVNAVATRRARVPAEVRSSA >Mature_539_residues SLNVLMVAAEAAPLAKSGGLGDMVSASASALRQRGVDASILLPGYESAFDHAVAPTPLGTIRDLPGGDARLWRAAMPDSD VPVLLLEMKHLYGRRGSGLYQDECGRDYVDNFVRFASLSAAAARIASGVRGVKRPRIVHAHDWHTGLTPLLMKLAGSPAR SIFTIHNLAFQGNYPTGLAPYAGIPSELLAPAPHEPHSIEFYGALSCMKAAIVYADRLTAVSERYAQEILTPRFGNRMEG VLAAHAGKLSGIVNGIDDALWNPRDDAALAQGYGVDDLVGKHACKRELQQSYGLQVDPFAPLVAIGSRLTGQKLADVVCE AIPAALARWPRAQFAVLGQGDAAIEAELRRLAAQWPGRLGVHIGYDETRAHRLHAGADILLHASRFEPCGLTQLYAMRYG TVPVASRVGGLADTIVDCAPAAQDAEAAPVGEATGFLFDGERVGDVVQALGRAFELFAQPKSWRTLQRNAMNRDSSWEGP AARYLALYCELAGLPAPRAAAIQAPAAQLEPAAIERAAPRVNAVATRRARVPAEVRSSA
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=493, Percent_Identity=42.393509127789, Blast_Score=358, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 57470; Mature: 57339
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNVLMVAAEAAPLAKSGGLGDMVSASASALRQRGVDASILLPGYESAFDHAVAPTPLG CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCC TIRDLPGGDARLWRAAMPDSDVPVLLLEMKHLYGRRGSGLYQDECGRDYVDNFVRFASLS HHCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHH AAAARIASGVRGVKRPRIVHAHDWHTGLTPLLMKLAGSPARSIFTIHNLAFQGNYPTGLA HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHEEEEEHEEEECCCCCCCC PYAGIPSELLAPAPHEPHSIEFYGALSCMKAAIVYADRLTAVSERYAQEILTPRFGNRME CCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GVLAAHAGKLSGIVNGIDDALWNPRDDAALAQGYGVDDLVGKHACKRELQQSYGLQVDPF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC APLVAIGSRLTGQKLADVVCEAIPAALARWPRAQFAVLGQGDAAIEAELRRLAAQWPGRL CHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCE GVHIGYDETRAHRLHAGADILLHASRFEPCGLTQLYAMRYGTVPVASRVGGLADTIVDCA EEEECCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHC PAAQDAEAAPVGEATGFLFDGERVGDVVQALGRAFELFAQPKSWRTLQRNAMNRDSSWEG CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC PAARYLALYCELAGLPAPRAAAIQAPAAQLEPAAIERAAPRVNAVATRRARVPAEVRSSA HHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCHHHHHHHCCCHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure SLNVLMVAAEAAPLAKSGGLGDMVSASASALRQRGVDASILLPGYESAFDHAVAPTPLG CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCC TIRDLPGGDARLWRAAMPDSDVPVLLLEMKHLYGRRGSGLYQDECGRDYVDNFVRFASLS HHCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHH AAAARIASGVRGVKRPRIVHAHDWHTGLTPLLMKLAGSPARSIFTIHNLAFQGNYPTGLA HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHEEEEEHEEEECCCCCCCC PYAGIPSELLAPAPHEPHSIEFYGALSCMKAAIVYADRLTAVSERYAQEILTPRFGNRME CCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GVLAAHAGKLSGIVNGIDDALWNPRDDAALAQGYGVDDLVGKHACKRELQQSYGLQVDPF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC APLVAIGSRLTGQKLADVVCEAIPAALARWPRAQFAVLGQGDAAIEAELRRLAAQWPGRL CHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCE GVHIGYDETRAHRLHAGADILLHASRFEPCGLTQLYAMRYGTVPVASRVGGLADTIVDCA EEEECCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHC PAAQDAEAAPVGEATGFLFDGERVGDVVQALGRAFELFAQPKSWRTLQRNAMNRDSSWEG CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC PAARYLALYCELAGLPAPRAAAIQAPAAQLEPAAIERAAPRVNAVATRRARVPAEVRSSA HHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCHHHHHHHCCCHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]