Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027244

Identifier: 238027244

GI number: 238027244

Start: 1788134

End: 1790899

Strand: Direct

Name: 238027244

Synonym: bglu_1g16310

Alternate gene names: NA

Gene position: 1788134-1790899 (Clockwise)

Preceding gene: 238027242

Following gene: 238027245

Centisome position: 45.77

GC content: 55.93

Gene sequence:

>2766_bases
ATGAACATGACCGAAGTGGCTCAGGCGATTCGTGGCGGCCTGATTCAGCAAGATCGCCTGCTCAAGGCGAGCATCCCATC
GCTGCCGGAGAATGCGCTTGTCCCGCGTCGGGCGGTGACTTATTCCGAGCTTGGCCGTGACTTCAGTGTCAAGCTCGACA
TGGTGTCCACAGCGGGCGATATTGAGCTTAAAACATTGATCGCTCAACCGATGACCCTTTGGTTGCAGCAAGCGAACAAG
TCCTATTTACCGATCAACGGATACATCCATACAGCTCGTAGGCTTGGTTCTGACGGAAGCCTTTCAAGTTACCAATTGGC
TTTCGCTTCGTGGATGCATTTCTTAAAGTTCCGCAGCGATATGCGGTACTGGCAGAACCAGAGTGTTGACGCCATCCTCA
GCGATGTATTTAATGCGCATCCACAAGCGCGGGGGCAATTCGAATTCGCCTTGCTGAAGCCGTTACCCTCGCGCTCGTAT
TGCCGTCAGAGTGAGACTGATTGGAATTTCGTTCATCGATTGATGGAAGAAGAAGGCTTGTTCGGTTTTTGGCGTCAGGA
CAATGAAGGCAAGTCGCACAAACTCGTCGTGACCGATAACATTTACTCGCTTGACGAACTATCTCCCAATCCGGTCGAAT
TTTCCAGATCAGGCGCCCGTAGCGAAACGGATGCATTTACGCAATGGGCAGGCTCGCGGACATTGCAGAGTACCGTACAT
ACGACGCGTACCTTTGACTACAAGGCACCATCGCCCATTACCAACCCCAGAGGTACGACGCTGCCAACGATGGCCGGTCA
AGGGAATTTGCCGGAACAGACGGAAGTCTACGAATATACCGGCGCCTACACGTATCTGAGCCGGGATCGCGGTGAACATC
TCTCGAAGATTCATCTAGAGGAATGGGAATCGAGGGCGAAGAGATTTCTTGGCGTGGGAGGTGTTCGGGCCATTGATGCC
GGCCGCCGCTTCGTACTGACTGGGCATCCTGAGCACGATCGTGATCCGGCCGGGCACCGAGAATTCGCATCGATAAAAGT
GCGTCGGTACGTCGAAAACAATCTGCCGCTATCGAGTCACGAAGCGAGCTTCCCATATAGCTTGCAGAGCGAAGTAGCAC
AGGCAAAGTTTGAGCAATCGGGTGAGATCGTCACTCATGAAGATGGCTCGGCCGGTTTTTATCTGGTCGAAGTCGAGGCA
CAGCGTGTCACTGTTCCGTATCGGAGTCCGTTCGAACACAAGAAGCCGACGATGGAGTTGGAGACGGCGATTGTCGTGGG
GCCGCAGGGTGAAGAGGTGTATACGGACGCATTGAACCGCGTCAAGATCATGTTCGTATGGGACCGCCAAAGTTCGGGGG
ACGCGAATGCCTCGTGCTGGGTGAGAGTTGCGCAGTCGGATACAGGCGGGGGGTACGGAAGCGTACACGTTCCGAGGATC
GGAGAAGAAGTACTGGTTGGTTATGTCGGGGGAGACTGTGACAGGCCCATCGTGCTACATCGCGTTTACAACGGACGCGT
TCAGCCGCAATGGCATAGTAATGGCATCCTGTCGGGCTATCGATCGAAAGAGTATGCCGGTGCTGGCTACAACGAGATGG
TCCTGGACGACGCTACTGCGCAGAATCGTGTTCGACTGTTCAGCAGCAGTTCGAACACGCTTCTTCATCTCGGCTATCTC
ATCGATCAGGACGGTAACACCCGTGGCCCCTATCTCGGCAGCGGTTTCGATTTGAAATCGGATGCTCACGGGGCAATTCG
TGCGGCGCAGGGGCTTTTCGTCTCAAGCTACGACGCATCGGTCAAACAGCCCATGGATGCGCGTCACGCGACTGGCCAAC
TCGCTAACGCGCAAAGCGTTGTCCAGTCGCTTTCTGACGCAAGTGCAGGGCATCGCGCTGAGAGTCTCAGCGCAGGTTAT
GATGCGTTGCGTGCATTTACCGACGCGACGCAGGCAAGCGTCGCTGGCATTTCTACCGGAGGTCGCACCGCCGGTGGCGG
TGCCGGGAGTGCGAACGGTTTCAAGGCCCCGATCATGTTGTTTGCAAGCCCGGCCGGTATCGCGACATCAACGCAGCAGT
CGACACAGATCACGGCTGACCAGCACGTAAATATCGTCAGCGGTGAAAGTACGCATCTGGCTGCTGGGAAATCGTTGGTC
GCGAGCGTGGCCGAAAAAGTCAGCTTGTTCGTCAAGAATGCGGGGATGAAGCTATTCGCAGCAAAGGGCAAGGTCGAAAT
CCAGGCGCAGTCGGATAATGTCGAAATAATCGCCGATCAGGTTCTGAAACTGATCAGCGCAAAGCGTCGGATCGAGATCA
CCGCCGCCGAGGAAATACTGCTCAACGCGCGCGGTAGTTATATCCGGATCAACGGTGCAGGAATCGAGCATGGTACGCCC
GCGCAATGGATCGCCTATGCGGGCAACCATGCGCTGCCGGGTCCCAAGTCGCTACCTGTCGTCGTACCCGGCTTTGACAT
GCCGAAAGCGTTCAGCAATCGACTCGACGTCTATGATGTCTACTGGCAAAGAGAGTTCGGCGAGGTCGAATATACGGCGC
GACGAGAGAATGGTGAGGTGATGGCTCAGGGTACTCTCGATGAGCATGGCCGCACGCCACGCCTGACGACCGACCAACCC
GAGACCCTTCAGGTGCTCGTCGGCACGCAAGGGTCGTGGCTAGTCGAATCGGTAGCCTCATCGTCCAGCGATTCCGGCGA
AGCCACTCCAGACGACCCGGACCATTACGTTAATCACAGCGCCTGA

Upstream 100 bases:

>100_bases
CGACCTGTCAACGGCGCTAAAATTGCGGCGATATACGGGGACGCCGTTCCCGCGAGAGCGTAGGCCGTTGAGCCTGCAAA
AACAAGAAGATGGATAACGC

Downstream 100 bases:

>100_bases
ACGCCGTTCGAGCCAATCCAAAAAATCATGACCGCTCCGAATACCAACACTGATCCTCTGTCCGCCGTAACGGTTTATTT
CAAGGATCATTTTGGCCGAC

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Vgr-Related Protein; Rhs Element Vgr Family Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VgrG Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G

Number of amino acids: Translated: 921; Mature: 921

Protein sequence:

>921_residues
MNMTEVAQAIRGGLIQQDRLLKASIPSLPENALVPRRAVTYSELGRDFSVKLDMVSTAGDIELKTLIAQPMTLWLQQANK
SYLPINGYIHTARRLGSDGSLSSYQLAFASWMHFLKFRSDMRYWQNQSVDAILSDVFNAHPQARGQFEFALLKPLPSRSY
CRQSETDWNFVHRLMEEEGLFGFWRQDNEGKSHKLVVTDNIYSLDELSPNPVEFSRSGARSETDAFTQWAGSRTLQSTVH
TTRTFDYKAPSPITNPRGTTLPTMAGQGNLPEQTEVYEYTGAYTYLSRDRGEHLSKIHLEEWESRAKRFLGVGGVRAIDA
GRRFVLTGHPEHDRDPAGHREFASIKVRRYVENNLPLSSHEASFPYSLQSEVAQAKFEQSGEIVTHEDGSAGFYLVEVEA
QRVTVPYRSPFEHKKPTMELETAIVVGPQGEEVYTDALNRVKIMFVWDRQSSGDANASCWVRVAQSDTGGGYGSVHVPRI
GEEVLVGYVGGDCDRPIVLHRVYNGRVQPQWHSNGILSGYRSKEYAGAGYNEMVLDDATAQNRVRLFSSSSNTLLHLGYL
IDQDGNTRGPYLGSGFDLKSDAHGAIRAAQGLFVSSYDASVKQPMDARHATGQLANAQSVVQSLSDASAGHRAESLSAGY
DALRAFTDATQASVAGISTGGRTAGGGAGSANGFKAPIMLFASPAGIATSTQQSTQITADQHVNIVSGESTHLAAGKSLV
ASVAEKVSLFVKNAGMKLFAAKGKVEIQAQSDNVEIIADQVLKLISAKRRIEITAAEEILLNARGSYIRINGAGIEHGTP
AQWIAYAGNHALPGPKSLPVVVPGFDMPKAFSNRLDVYDVYWQREFGEVEYTARRENGEVMAQGTLDEHGRTPRLTTDQP
ETLQVLVGTQGSWLVESVASSSSDSGEATPDDPDHYVNHSA

Sequences:

>Translated_921_residues
MNMTEVAQAIRGGLIQQDRLLKASIPSLPENALVPRRAVTYSELGRDFSVKLDMVSTAGDIELKTLIAQPMTLWLQQANK
SYLPINGYIHTARRLGSDGSLSSYQLAFASWMHFLKFRSDMRYWQNQSVDAILSDVFNAHPQARGQFEFALLKPLPSRSY
CRQSETDWNFVHRLMEEEGLFGFWRQDNEGKSHKLVVTDNIYSLDELSPNPVEFSRSGARSETDAFTQWAGSRTLQSTVH
TTRTFDYKAPSPITNPRGTTLPTMAGQGNLPEQTEVYEYTGAYTYLSRDRGEHLSKIHLEEWESRAKRFLGVGGVRAIDA
GRRFVLTGHPEHDRDPAGHREFASIKVRRYVENNLPLSSHEASFPYSLQSEVAQAKFEQSGEIVTHEDGSAGFYLVEVEA
QRVTVPYRSPFEHKKPTMELETAIVVGPQGEEVYTDALNRVKIMFVWDRQSSGDANASCWVRVAQSDTGGGYGSVHVPRI
GEEVLVGYVGGDCDRPIVLHRVYNGRVQPQWHSNGILSGYRSKEYAGAGYNEMVLDDATAQNRVRLFSSSSNTLLHLGYL
IDQDGNTRGPYLGSGFDLKSDAHGAIRAAQGLFVSSYDASVKQPMDARHATGQLANAQSVVQSLSDASAGHRAESLSAGY
DALRAFTDATQASVAGISTGGRTAGGGAGSANGFKAPIMLFASPAGIATSTQQSTQITADQHVNIVSGESTHLAAGKSLV
ASVAEKVSLFVKNAGMKLFAAKGKVEIQAQSDNVEIIADQVLKLISAKRRIEITAAEEILLNARGSYIRINGAGIEHGTP
AQWIAYAGNHALPGPKSLPVVVPGFDMPKAFSNRLDVYDVYWQREFGEVEYTARRENGEVMAQGTLDEHGRTPRLTTDQP
ETLQVLVGTQGSWLVESVASSSSDSGEATPDDPDHYVNHSA
>Mature_921_residues
MNMTEVAQAIRGGLIQQDRLLKASIPSLPENALVPRRAVTYSELGRDFSVKLDMVSTAGDIELKTLIAQPMTLWLQQANK
SYLPINGYIHTARRLGSDGSLSSYQLAFASWMHFLKFRSDMRYWQNQSVDAILSDVFNAHPQARGQFEFALLKPLPSRSY
CRQSETDWNFVHRLMEEEGLFGFWRQDNEGKSHKLVVTDNIYSLDELSPNPVEFSRSGARSETDAFTQWAGSRTLQSTVH
TTRTFDYKAPSPITNPRGTTLPTMAGQGNLPEQTEVYEYTGAYTYLSRDRGEHLSKIHLEEWESRAKRFLGVGGVRAIDA
GRRFVLTGHPEHDRDPAGHREFASIKVRRYVENNLPLSSHEASFPYSLQSEVAQAKFEQSGEIVTHEDGSAGFYLVEVEA
QRVTVPYRSPFEHKKPTMELETAIVVGPQGEEVYTDALNRVKIMFVWDRQSSGDANASCWVRVAQSDTGGGYGSVHVPRI
GEEVLVGYVGGDCDRPIVLHRVYNGRVQPQWHSNGILSGYRSKEYAGAGYNEMVLDDATAQNRVRLFSSSSNTLLHLGYL
IDQDGNTRGPYLGSGFDLKSDAHGAIRAAQGLFVSSYDASVKQPMDARHATGQLANAQSVVQSLSDASAGHRAESLSAGY
DALRAFTDATQASVAGISTGGRTAGGGAGSANGFKAPIMLFASPAGIATSTQQSTQITADQHVNIVSGESTHLAAGKSLV
ASVAEKVSLFVKNAGMKLFAAKGKVEIQAQSDNVEIIADQVLKLISAKRRIEITAAEEILLNARGSYIRINGAGIEHGTP
AQWIAYAGNHALPGPKSLPVVVPGFDMPKAFSNRLDVYDVYWQREFGEVEYTARRENGEVMAQGTLDEHGRTPRLTTDQP
ETLQVLVGTQGSWLVESVASSSSDSGEATPDDPDHYVNHSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100839; Mature: 100839

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTEVAQAIRGGLIQQDRLLKASIPSLPENALVPRRAVTYSELGRDFSVKLDMVSTAGD
CCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHCCHHHHCCCEEEEEEEEECCCC
IELKTLIAQPMTLWLQQANKSYLPINGYIHTARRLGSDGSLSSYQLAFASWMHFLKFRSD
EEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MRYWQNQSVDAILSDVFNAHPQARGQFEFALLKPLPSRSYCRQSETDWNFVHRLMEEEGL
HHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCC
FGFWRQDNEGKSHKLVVTDNIYSLDELSPNPVEFSRSGARSETDAFTQWAGSRTLQSTVH
EEEEECCCCCCCEEEEEECCCEEHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
TTRTFDYKAPSPITNPRGTTLPTMAGQGNLPEQTEVYEYTGAYTYLSRDRGEHLSKIHLE
HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHH
EWESRAKRFLGVGGVRAIDAGRRFVLTGHPEHDRDPAGHREFASIKVRRYVENNLPLSSH
HHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHEEEHHHCCCCCCCC
EASFPYSLQSEVAQAKFEQSGEIVTHEDGSAGFYLVEVEAQRVTVPYRSPFEHKKPTMEL
CCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEE
ETAIVVGPQGEEVYTDALNRVKIMFVWDRQSSGDANASCWVRVAQSDTGGGYGSVHVPRI
EEEEEECCCCCHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEECCCC
GEEVLVGYVGGDCDRPIVLHRVYNGRVQPQWHSNGILSGYRSKEYAGAGYNEMVLDDATA
CCEEEEEEECCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
QNRVRLFSSSSNTLLHLGYLIDQDGNTRGPYLGSGFDLKSDAHGAIRAAQGLFVSSYDAS
CCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCH
VKQPMDARHATGQLANAQSVVQSLSDASAGHRAESLSAGYDALRAFTDATQASVAGISTG
HCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
GRTAGGGAGSANGFKAPIMLFASPAGIATSTQQSTQITADQHVNIVSGESTHLAAGKSLV
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCEEHHHHHHH
ASVAEKVSLFVKNAGMKLFAAKGKVEIQAQSDNVEIIADQVLKLISAKRRIEITAAEEIL
HHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCEEHHHHHHHHHHHCCCEEEEEEHHHHH
LNARGSYIRINGAGIEHGTPAQWIAYAGNHALPGPKSLPVVVPGFDMPKAFSNRLDVYDV
EECCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCEEEE
YWQREFGEVEYTARRENGEVMAQGTLDEHGRTPRLTTDQPETLQVLVGTQGSWLVESVAS
EEECCCCCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHC
SSSDSGEATPDDPDHYVNHSA
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNMTEVAQAIRGGLIQQDRLLKASIPSLPENALVPRRAVTYSELGRDFSVKLDMVSTAGD
CCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHCCHHHHCCCEEEEEEEEECCCC
IELKTLIAQPMTLWLQQANKSYLPINGYIHTARRLGSDGSLSSYQLAFASWMHFLKFRSD
EEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MRYWQNQSVDAILSDVFNAHPQARGQFEFALLKPLPSRSYCRQSETDWNFVHRLMEEEGL
HHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCC
FGFWRQDNEGKSHKLVVTDNIYSLDELSPNPVEFSRSGARSETDAFTQWAGSRTLQSTVH
EEEEECCCCCCCEEEEEECCCEEHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
TTRTFDYKAPSPITNPRGTTLPTMAGQGNLPEQTEVYEYTGAYTYLSRDRGEHLSKIHLE
HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHH
EWESRAKRFLGVGGVRAIDAGRRFVLTGHPEHDRDPAGHREFASIKVRRYVENNLPLSSH
HHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHEEEHHHCCCCCCCC
EASFPYSLQSEVAQAKFEQSGEIVTHEDGSAGFYLVEVEAQRVTVPYRSPFEHKKPTMEL
CCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEE
ETAIVVGPQGEEVYTDALNRVKIMFVWDRQSSGDANASCWVRVAQSDTGGGYGSVHVPRI
EEEEEECCCCCHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEECCCC
GEEVLVGYVGGDCDRPIVLHRVYNGRVQPQWHSNGILSGYRSKEYAGAGYNEMVLDDATA
CCEEEEEEECCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
QNRVRLFSSSSNTLLHLGYLIDQDGNTRGPYLGSGFDLKSDAHGAIRAAQGLFVSSYDAS
CCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCH
VKQPMDARHATGQLANAQSVVQSLSDASAGHRAESLSAGYDALRAFTDATQASVAGISTG
HCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
GRTAGGGAGSANGFKAPIMLFASPAGIATSTQQSTQITADQHVNIVSGESTHLAAGKSLV
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCEEHHHHHHH
ASVAEKVSLFVKNAGMKLFAAKGKVEIQAQSDNVEIIADQVLKLISAKRRIEITAAEEIL
HHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCEEHHHHHHHHHHHCCCEEEEEEHHHHH
LNARGSYIRINGAGIEHGTPAQWIAYAGNHALPGPKSLPVVVPGFDMPKAFSNRLDVYDV
EECCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCEEEE
YWQREFGEVEYTARRENGEVMAQGTLDEHGRTPRLTTDQPETLQVLVGTQGSWLVESVAS
EEECCCCCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHC
SSSDSGEATPDDPDHYVNHSA
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA