Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027241

Identifier: 238027241

GI number: 238027241

Start: 1785235

End: 1786023

Strand: Direct

Name: 238027241

Synonym: bglu_1g16270

Alternate gene names: NA

Gene position: 1785235-1786023 (Clockwise)

Preceding gene: 238027240

Following gene: 238027242

Centisome position: 45.7

GC content: 69.2

Gene sequence:

>789_bases
ATGACTGTTGCTCCCGCCACGCTGGTGGCGCTGATCGTCGGCACGCTGCTCGTCGCGCTGCTGCCGATCGTCACGTACCG
TCTGCTGAAAGCCCCGATGAGGCTCGACCGGCGCGACGCGATCGTCGGCGTCGCCGCGTTCATGCTGTTCGCGACGCTGC
TCGAGCGCGGCTTCTACGCGCTCGCGCTGGGCCTGCCCGCGATCACGCAGTTTCTGGTCAAGCCGGCCGCCTTCGTCGCG
TTCGGCACGATCGCGGCCGCGGTGTTCGAAGAGGCCGGCCGCTACCTCGGGATGCGCTTCGTCGAGCGGCGCTACGGCGC
CTCGCCTGGCGACGGACGCGGGCTCGGCTACGGCATCGGCTTCGGCGGCGCGCAGGCGTGGTTCGTCGGCGTGATCGTGC
TGGGCCAGTGGACCTGGCTCGTCTGGCTGGCGCAGCGCGGCCAGCTCAACGAACAGCTCGCCACCATGCCGACCGATCTC
GCGCTGCGCATCCAGATGATGCTGGTGACGATGTCGGCGCCGTCGATCGGCGTGCGCGTGTTCGAATGCGTGGCCGCGTT
CACGTTCCAGCTGGCGATGTCGGTGATCGTCTGGCGCGGGGTGCAGGCGCGCAAGCGCTGGATTCTGCCGCTCGCGATCG
TGCTGCATCCGATCGGCGACCTGCCGCTGATCGCGTTCAATGCCGGCGCGATGCCGATTTCGACCATGGTCACGCTGTAT
GGCGTGCTGACGATGCTGCTGATCGCCGGACTCGCCCGCTGGTGCCGGCCTGCGCCGAATGCGGCCTGA

Upstream 100 bases:

>100_bases
CTGCTGCCCGGCGAGCTGATCGTGCGCACGTCCACCTCAAGCTGAGTATCATGCGGGGTTGCGCATCGTCCGGTGCGCCC
GCACTCGCTCAAGGAACGTC

Downstream 100 bases:

>100_bases
GCGGCCACGGAGATCGCTGATGGATGAGTACCACTACGATTGCGCGAGCGCCGAATTCAACGAGCTGGCGCATGTGATCT
GCGACCTGTTCCCCGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein Transmembrane; Lipoprotein

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTVAPATLVALIVGTLLVALLPIVTYRLLKAPMRLDRRDAIVGVAAFMLFATLLERGFYALALGLPAITQFLVKPAAFVA
FGTIAAAVFEEAGRYLGMRFVERRYGASPGDGRGLGYGIGFGGAQAWFVGVIVLGQWTWLVWLAQRGQLNEQLATMPTDL
ALRIQMMLVTMSAPSIGVRVFECVAAFTFQLAMSVIVWRGVQARKRWILPLAIVLHPIGDLPLIAFNAGAMPISTMVTLY
GVLTMLLIAGLARWCRPAPNAA

Sequences:

>Translated_262_residues
MTVAPATLVALIVGTLLVALLPIVTYRLLKAPMRLDRRDAIVGVAAFMLFATLLERGFYALALGLPAITQFLVKPAAFVA
FGTIAAAVFEEAGRYLGMRFVERRYGASPGDGRGLGYGIGFGGAQAWFVGVIVLGQWTWLVWLAQRGQLNEQLATMPTDL
ALRIQMMLVTMSAPSIGVRVFECVAAFTFQLAMSVIVWRGVQARKRWILPLAIVLHPIGDLPLIAFNAGAMPISTMVTLY
GVLTMLLIAGLARWCRPAPNAA
>Mature_261_residues
TVAPATLVALIVGTLLVALLPIVTYRLLKAPMRLDRRDAIVGVAAFMLFATLLERGFYALALGLPAITQFLVKPAAFVAF
GTIAAAVFEEAGRYLGMRFVERRYGASPGDGRGLGYGIGFGGAQAWFVGVIVLGQWTWLVWLAQRGQLNEQLATMPTDLA
LRIQMMLVTMSAPSIGVRVFECVAAFTFQLAMSVIVWRGVQARKRWILPLAIVLHPIGDLPLIAFNAGAMPISTMVTLYG
VLTMLLIAGLARWCRPAPNAA

Specific function: Unknown

COG id: COG4377

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28306; Mature: 28175

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TVAPATLVALIVGTLLVALLPIVTYRLLKAPMRLDRRDAIVGVAAFMLFATLLERGFYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHH
LALGLPAITQFLVKPAAFVAFGTIAAAVFEEAGRYLGMRFVERRYGASPGDGRGLGYGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
FGGAQAWFVGVIVLGQWTWLVWLAQRGQLNEQLATMPTDLALRIQMMLVTMSAPSIGVRV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
FECVAAFTFQLAMSVIVWRGVQARKRWILPLAIVLHPIGDLPLIAFNAGAMPISTMVTLY
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH
GVLTMLLIAGLARWCRPAPNAA
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA