Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is kdgK [H]

Identifier: 238027237

GI number: 238027237

Start: 1780441

End: 1781442

Strand: Direct

Name: kdgK [H]

Synonym: bglu_1g16230

Alternate gene names: 238027237

Gene position: 1780441-1781442 (Clockwise)

Preceding gene: 238027236

Following gene: 238027238

Centisome position: 45.58

GC content: 73.65

Gene sequence:

>1002_bases
ATGCCGCAATCCCCTGTCGACGTCATCACCTACGGCGAGGCGATGACGCTGTTCGTCGCGAACGCGCCCGGCCCGCTCGC
GCAGGCCGAGCAGTTTACGAAGCGCATCGCCGGCGCGGACCTGAACGTCGCGATCGGCCTCGCGCGGCTCGGTTTCCGGG
TCGGCTACGTGAGCCGGGTGGGCGCCGATTCGTTCGGCCGCCACGTGCTCGACACGCTCGCCCAGGAGGGCATCGACGCG
TCGTGCGTGACGATCGACCAACGCCACCGCACCGGCTTCCAGCTCAAGGCGCGCGCCGAGGGCGGCGCCGACCCCGACGT
CGAATACTTCCGCAAGGGCTCGGCCGCGAGCCACCTCTCGCTCGACGACTACGCCGCCGACTACGTGCTGGGCGCGCGCC
ACCTGCATCTGACGGGCGTCGCGCCGGCGATCTCGGCGACCTCGTGCGAGCTCGCGTTCCATCTGGCGCGCGAGATGCGC
GCGGCCGGCCGGAGCATTTCGTTCGACCCGAACCTGCGCCCGACTTTGTGGCCCTCCGCCGAGGTCATGGCGCGCACGCT
CAACGAACTCGCCTCGCATGCCGACTGGGTGCTGCCCGGGCTGGCTGAAGGCCGCGCGCTGACCGGCCTCGACACGCCGG
CCGAGATCGCGCGCTTCTATCTGGCCAACGGCGCGCGCGCCGGCGTGGTCATCAAGCTCGGCGAGGCCGGCGCCTATTAC
CTGACGGCGCGCGGCGAGGAGGGGACCGTGGCGGGCGAGCGCGTCGCGCGCGTGGTCGACACGGTCGGCGCGGGCGACGG
CTTCGCGGTCGGCGTGGTCAGCGCGCTGCTCGAGGGCCGGCCGATCGGCGCGGCGGTGGCGCGCGGCAACCGGATCGGCG
CGCTCGCGATCCAGGTGATCGGCGACTCCGAGGGCCTGCCGACGCGCGAGCAGCTCGAGCGTCTCGAAGGCGCGGCGGCG
CGTGGGCCGCAGGCCGCCACCGAGGCGCCGCTCGCGCGATAA

Upstream 100 bases:

>100_bases
TCGAGTTTCCGTTCGACCCGGCGGATCTCGCCGCCGACGCGCGCCGGCGCGTGGCCTGGCTCGAAGCCGCCTGATCCCTT
TTTCCGAAGGAGTGTTCCGT

Downstream 100 bases:

>100_bases
TCGGCGCAGGCGGCGCGCGACAGGCCGCAACCCGCGGGCGCGGCCCGCGGCACACGAAGAATGCGATACGGCGACACCCG
CCGAAGGAGACAGCCCCATG

Product: sugar kinases, ribokinase family

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPQSPVDVITYGEAMTLFVANAPGPLAQAEQFTKRIAGADLNVAIGLARLGFRVGYVSRVGADSFGRHVLDTLAQEGIDA
SCVTIDQRHRTGFQLKARAEGGADPDVEYFRKGSAASHLSLDDYAADYVLGARHLHLTGVAPAISATSCELAFHLAREMR
AAGRSISFDPNLRPTLWPSAEVMARTLNELASHADWVLPGLAEGRALTGLDTPAEIARFYLANGARAGVVIKLGEAGAYY
LTARGEEGTVAGERVARVVDTVGAGDGFAVGVVSALLEGRPIGAAVARGNRIGALAIQVIGDSEGLPTREQLERLEGAAA
RGPQAATEAPLAR

Sequences:

>Translated_333_residues
MPQSPVDVITYGEAMTLFVANAPGPLAQAEQFTKRIAGADLNVAIGLARLGFRVGYVSRVGADSFGRHVLDTLAQEGIDA
SCVTIDQRHRTGFQLKARAEGGADPDVEYFRKGSAASHLSLDDYAADYVLGARHLHLTGVAPAISATSCELAFHLAREMR
AAGRSISFDPNLRPTLWPSAEVMARTLNELASHADWVLPGLAEGRALTGLDTPAEIARFYLANGARAGVVIKLGEAGAYY
LTARGEEGTVAGERVARVVDTVGAGDGFAVGVVSALLEGRPIGAAVARGNRIGALAIQVIGDSEGLPTREQLERLEGAAA
RGPQAATEAPLAR
>Mature_332_residues
PQSPVDVITYGEAMTLFVANAPGPLAQAEQFTKRIAGADLNVAIGLARLGFRVGYVSRVGADSFGRHVLDTLAQEGIDAS
CVTIDQRHRTGFQLKARAEGGADPDVEYFRKGSAASHLSLDDYAADYVLGARHLHLTGVAPAISATSCELAFHLAREMRA
AGRSISFDPNLRPTLWPSAEVMARTLNELASHADWVLPGLAEGRALTGLDTPAEIARFYLANGARAGVVIKLGEAGAYYL
TARGEEGTVAGERVARVVDTVGAGDGFAVGVVSALLEGRPIGAAVARGNRIGALAIQVIGDSEGLPTREQLERLEGAAAR
GPQAATEAPLAR

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=290, Percent_Identity=30, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87082281, Length=283, Percent_Identity=30.7420494699647, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 34806; Mature: 34675

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSPVDVITYGEAMTLFVANAPGPLAQAEQFTKRIAGADLNVAIGLARLGFRVGYVSRV
CCCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
GADSFGRHVLDTLAQEGIDASCVTIDQRHRTGFQLKARAEGGADPDVEYFRKGSAASHLS
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCC
LDDYAADYVLGARHLHLTGVAPAISATSCELAFHLAREMRAAGRSISFDPNLRPTLWPSA
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
EVMARTLNELASHADWVLPGLAEGRALTGLDTPAEIARFYLANGARAGVVIKLGEAGAYY
HHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEE
LTARGEEGTVAGERVARVVDTVGAGDGFAVGVVSALLEGRPIGAAVARGNRIGALAIQVI
EEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEE
GDSEGLPTREQLERLEGAAARGPQAATEAPLAR
ECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PQSPVDVITYGEAMTLFVANAPGPLAQAEQFTKRIAGADLNVAIGLARLGFRVGYVSRV
CCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
GADSFGRHVLDTLAQEGIDASCVTIDQRHRTGFQLKARAEGGADPDVEYFRKGSAASHLS
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCC
LDDYAADYVLGARHLHLTGVAPAISATSCELAFHLAREMRAAGRSISFDPNLRPTLWPSA
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
EVMARTLNELASHADWVLPGLAEGRALTGLDTPAEIARFYLANGARAGVVIKLGEAGAYY
HHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEE
LTARGEEGTVAGERVARVVDTVGAGDGFAVGVVSALLEGRPIGAAVARGNRIGALAIQVI
EEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEE
GDSEGLPTREQLERLEGAAARGPQAATEAPLAR
ECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]