| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is acrR [C]
Identifier: 238027232
GI number: 238027232
Start: 1774719
End: 1775339
Strand: Direct
Name: acrR [C]
Synonym: bglu_1g16180
Alternate gene names: 238027232
Gene position: 1774719-1775339 (Clockwise)
Preceding gene: 238027228
Following gene: 238027235
Centisome position: 45.43
GC content: 67.95
Gene sequence:
>621_bases ATGAAACCGAAGCGCCTGACCCGCGAGCAGAGCAAAGACCAGACGCGCGAGCGCCTGCTCAATTCCGCGCACGCGATATT CACGAAGAAGGGGTACGTGGCCGCGAGCGTCGAGGACATCGCGGCGGCGGCCGGCTACACGCGCGGCGCGTTCTATTCGA ATTTCGGCGGCAAGGCCGAACTGCTGTTCGAGCTGTTGCGGCGCGATCACGAGACGGTGCGCTCGGCGCTGTACCAGATC TTCGAGGCCGGCGGCACGCGCGAGCGCATGGAGGCGAGCGCGCTGGCGTTCTACAGCGGCTTCCTGCGCAAGAGCCCGGC ATTCCTGCTGTGGTGCGAGGCGCGGCTGCAGGCGGCGCGCGACGCGAAGTTCCGCACCCGCTACATCGCGTTCATGCGCG AGAAGATCGAGGACATGACCCATACCATCGAGATGTTCGTCGAGCAGTCGGGCACGCCGCTGCTGCTGCCCGCCGAGGTG CTCGCGATCGGCCTGATGGGCCTGTGCGACGGCGTGCAGTCGTTCCACGTAGCCGACCCGCAGCACGTGTCGCTCGACCT GATCGAGGCGACCCTGGCCGGCTTCTTCGCGCGCGTCGTGCTGGGCCGCGCGCCCGACTGA
Upstream 100 bases:
>100_bases CACGTTCGACTTTCGCTCGAAACGGTGGTGGATTCTAATACGCTGTTGTATCTGAATGCAAAGATGAATCGCAAATCGAA AGGTGCTAGACTGCGCGCCT
Downstream 100 bases:
>100_bases CGAGCGCCGGCCGCGGCCGGAACGCCTCGCGCGCAGCCCCCGCCGCGTCCTTGCGGCTGTTGCTGGTCGTTTCTTCGCGG CTTCCTTGCTGCTTCCTGGG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcription Regulator Protein; Regulatory Protein TetR
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKPKRLTREQSKDQTRERLLNSAHAIFTKKGYVAASVEDIAAAAGYTRGAFYSNFGGKAELLFELLRRDHETVRSALYQI FEAGGTRERMEASALAFYSGFLRKSPAFLLWCEARLQAARDAKFRTRYIAFMREKIEDMTHTIEMFVEQSGTPLLLPAEV LAIGLMGLCDGVQSFHVADPQHVSLDLIEATLAGFFARVVLGRAPD
Sequences:
>Translated_206_residues MKPKRLTREQSKDQTRERLLNSAHAIFTKKGYVAASVEDIAAAAGYTRGAFYSNFGGKAELLFELLRRDHETVRSALYQI FEAGGTRERMEASALAFYSGFLRKSPAFLLWCEARLQAARDAKFRTRYIAFMREKIEDMTHTIEMFVEQSGTPLLLPAEV LAIGLMGLCDGVQSFHVADPQHVSLDLIEATLAGFFARVVLGRAPD >Mature_206_residues MKPKRLTREQSKDQTRERLLNSAHAIFTKKGYVAASVEDIAAAAGYTRGAFYSNFGGKAELLFELLRRDHETVRSALYQI FEAGGTRERMEASALAFYSGFLRKSPAFLLWCEARLQAARDAKFRTRYIAFMREKIEDMTHTIEMFVEQSGTPLLLPAEV LAIGLMGLCDGVQSFHVADPQHVSLDLIEATLAGFFARVVLGRAPD
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23056; Mature: 23056
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKRLTREQSKDQTRERLLNSAHAIFTKKGYVAASVEDIAAAAGYTRGAFYSNFGGKAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHHHCCCCHHH LLFELLRRDHETVRSALYQIFEAGGTRERMEASALAFYSGFLRKSPAFLLWCEARLQAAR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH DAKFRTRYIAFMREKIEDMTHTIEMFVEQSGTPLLLPAEVLAIGLMGLCDGVQSFHVADP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC QHVSLDLIEATLAGFFARVVLGRAPD CHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKPKRLTREQSKDQTRERLLNSAHAIFTKKGYVAASVEDIAAAAGYTRGAFYSNFGGKAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHHHCCCCHHH LLFELLRRDHETVRSALYQIFEAGGTRERMEASALAFYSGFLRKSPAFLLWCEARLQAAR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH DAKFRTRYIAFMREKIEDMTHTIEMFVEQSGTPLLLPAEVLAIGLMGLCDGVQSFHVADP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC QHVSLDLIEATLAGFFARVVLGRAPD CHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA