| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027161
Identifier: 238027161
GI number: 238027161
Start: 1703314
End: 1704312
Strand: Direct
Name: 238027161
Synonym: bglu_1g15470
Alternate gene names: NA
Gene position: 1703314-1704312 (Clockwise)
Preceding gene: 238027160
Following gene: 238027162
Centisome position: 43.6
GC content: 67.27
Gene sequence:
>999_bases ATGAACTACTACCCCCATCACATCGGCGATTTCCGCTCCGGAACGGTCAACATGAGCCGCTTGGAGCGCTGGATCTACCG CGACCTCATCGACGTCTACTACGACACCGAGAAGCCGCTGCCGCTCGATCTCGACGCAGTCTGCTACGCCGTGGGCGTGA GCGCCGAAGAGGAGCGCCGCGCGGTCGCGAACCTGCTCCGGTTCAAGTTCACTCAGACCGAAGACGGCTACGTCCACGAT CGCTGCGAAATCGAGATCACAGCGTACCGCGCGCGCGCCGAAACCGCTCAGGAGAACGGCAAGAAGGGCGGCCGACCGAA GAAGCCGACCGGACCCGGATCGGGTGGCAAAAAGAACCCGACTGGAACCCAAGAAAAACCCAATGGGTTTCCGTCCGGTT CTGATCCGGATGCCAGCGGGGGGCAATCCGTAACCGGTTCTAAAACTAACCAAGAACCAAGAACCAAGAACCAAGAAGTA AACACAAGCGGCGGCGGCACAGCACAGGCAGTAACGCGCGAGGACGCGCCGAACGCCGCCGCCGCTTTCGTCGAGATCCT GCGCTCGAGCGGCGTGGCCTTCGTGGTCGACGACGAGCGCGTGGCCGGCTGGCCAGCGCTCGGCGCCACGCCCGACGACC TGCGCACGGCGATTGGCGCCGCGCTGGCGCGCCGCAGGCGCGAGAAGTCCGACCAGCCACTCAACGTCGGCCTGCTCAAC TCGATGCTGCCCGACGCCATCGCAGCGCGGGCAGGCCGCGCCGGCGCCGGCGCGCGCGCCGCGCCCGCCGGGCCGTGGTG GACCAGCTGGTCCGGCGTCGTCGCGCACGGCCGCTCGCTCGGCCTTGAGCAGGACGAGCACGAGACGTGTCCGGAATTCA AGCTGCGCGTGCTGAACGCCGCGGGCGATGGCCCATGGCGTGATGACCACCACCGCGCGTTTCGCAACTCTGCCGGGCCC GTCGCGGCCGGCGCAATGCTTGGGGGAACTGGGCGATGA
Upstream 100 bases:
>100_bases CCCCTGGAGTGCGCGGAGCAGGTTGCCGAAGCGCTGATAGCGCTGGCCAAGCGACGCAAGTAAAAAATGCATTGCCGGCG CCTTCTGATCGGAGGGCGCC
Downstream 100 bases:
>100_bases AGGTGAGCGAACTGAGCGGGGCGCTGCTCGACCTGTGGGTCGCACGCGCGGAGGGCGATGTGTTGGCGACGGCGAAGCCG GAATTCGGCCGCTATTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MNYYPHHIGDFRSGTVNMSRLERWIYRDLIDVYYDTEKPLPLDLDAVCYAVGVSAEEERRAVANLLRFKFTQTEDGYVHD RCEIEITAYRARAETAQENGKKGGRPKKPTGPGSGGKKNPTGTQEKPNGFPSGSDPDASGGQSVTGSKTNQEPRTKNQEV NTSGGGTAQAVTREDAPNAAAAFVEILRSSGVAFVVDDERVAGWPALGATPDDLRTAIGAALARRRREKSDQPLNVGLLN SMLPDAIAARAGRAGAGARAAPAGPWWTSWSGVVAHGRSLGLEQDEHETCPEFKLRVLNAAGDGPWRDDHHRAFRNSAGP VAAGAMLGGTGR
Sequences:
>Translated_332_residues MNYYPHHIGDFRSGTVNMSRLERWIYRDLIDVYYDTEKPLPLDLDAVCYAVGVSAEEERRAVANLLRFKFTQTEDGYVHD RCEIEITAYRARAETAQENGKKGGRPKKPTGPGSGGKKNPTGTQEKPNGFPSGSDPDASGGQSVTGSKTNQEPRTKNQEV NTSGGGTAQAVTREDAPNAAAAFVEILRSSGVAFVVDDERVAGWPALGATPDDLRTAIGAALARRRREKSDQPLNVGLLN SMLPDAIAARAGRAGAGARAAPAGPWWTSWSGVVAHGRSLGLEQDEHETCPEFKLRVLNAAGDGPWRDDHHRAFRNSAGP VAAGAMLGGTGR >Mature_332_residues MNYYPHHIGDFRSGTVNMSRLERWIYRDLIDVYYDTEKPLPLDLDAVCYAVGVSAEEERRAVANLLRFKFTQTEDGYVHD RCEIEITAYRARAETAQENGKKGGRPKKPTGPGSGGKKNPTGTQEKPNGFPSGSDPDASGGQSVTGSKTNQEPRTKNQEV NTSGGGTAQAVTREDAPNAAAAFVEILRSSGVAFVVDDERVAGWPALGATPDDLRTAIGAALARRRREKSDQPLNVGLLN SMLPDAIAARAGRAGAGARAAPAGPWWTSWSGVVAHGRSLGLEQDEHETCPEFKLRVLNAAGDGPWRDDHHRAFRNSAGP VAAGAMLGGTGR
Specific function: Unknown
COG id: COG3756
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35549; Mature: 35549
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYYPHHIGDFRSGTVNMSRLERWIYRDLIDVYYDTEKPLPLDLDAVCYAVGVSAEEERR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHH AVANLLRFKFTQTEDGYVHDRCEIEITAYRARAETAQENGKKGGRPKKPTGPGSGGKKNP HHHHHHHHHCCCCCCCEECCEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC TGTQEKPNGFPSGSDPDASGGQSVTGSKTNQEPRTKNQEVNTSGGGTAQAVTREDAPNAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH AAFVEILRSSGVAFVVDDERVAGWPALGATPDDLRTAIGAALARRRREKSDQPLNVGLLN HHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SMLPDAIAARAGRAGAGARAAPAGPWWTSWSGVVAHGRSLGLEQDEHETCPEFKLRVLNA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHEEEEEEC AGDGPWRDDHHRAFRNSAGPVAAGAMLGGTGR CCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCC >Mature Secondary Structure MNYYPHHIGDFRSGTVNMSRLERWIYRDLIDVYYDTEKPLPLDLDAVCYAVGVSAEEERR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHH AVANLLRFKFTQTEDGYVHDRCEIEITAYRARAETAQENGKKGGRPKKPTGPGSGGKKNP HHHHHHHHHCCCCCCCEECCEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC TGTQEKPNGFPSGSDPDASGGQSVTGSKTNQEPRTKNQEVNTSGGGTAQAVTREDAPNAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH AAFVEILRSSGVAFVVDDERVAGWPALGATPDDLRTAIGAALARRRREKSDQPLNVGLLN HHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SMLPDAIAARAGRAGAGARAAPAGPWWTSWSGVVAHGRSLGLEQDEHETCPEFKLRVLNA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHEEEEEEC AGDGPWRDDHHRAFRNSAGPVAAGAMLGGTGR CCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA