| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027111
Identifier: 238027111
GI number: 238027111
Start: 1648158
End: 1648976
Strand: Direct
Name: 238027111
Synonym: bglu_1g14910
Alternate gene names: NA
Gene position: 1648158-1648976 (Clockwise)
Preceding gene: 238027110
Following gene: 238027124
Centisome position: 42.19
GC content: 78.88
Gene sequence:
>819_bases ATGAGCACCGTCCCGCGTCGCGGCCGCCCGGGGTTCGAGCCGCCGCGCGGCGCAGCCGGCACGATGCCTGCGGGCCGGCG CGCTTGGTCCCGCACGGGCGCCGCGGCCGTGCGGGCGGCGCTGGATGCCCGTGCCCCGCTGTTCGTGGTGTCGCCGCATC TGGACGATGCCGTGTTCGGCTGCGCGTCGCTGCTCGCCACGCGGCCCGGCACGGTGGTCTGCACCGTGTTCGCGGGCCTG CCCGCGCCGCCGCAATGCCGGCCCTGGGACGCGGCAGGCGGCTTCGCCGATTCCACGGCGGCACTGCGCGAGCGCATCCG TGAGGATGACGAAGCGCTGCGGATCTGCGGTGCGCGCGGCCTGCGGCTGCCGTTTCTGGACGGCCAGTACGGGCCGCCGC CCGGCCAGCAAGCCCTGGCACGCGCGCTGGCCGCGCAGCTGGCGCGCTGCCCGGGCGCCGTGCCGCTGGTCCCGCTCGGC CTGCACCATCCCGACCATCGCTGCGTGGCCGACGCCTGGCAGCTGCTGGCGCGGCGGCAGCGGCGGCGGGCCTGGCTCGT CTACGAAGAGGCGATCCATCGCGGCGTTCCCGGCGTGACGGCCGCGCGCCTGCACCGCCTGGAGCGGGCGGGCTGGCGCC TCACGCCGCTGCGGGCCGGCTGGAGCGCCGCGCGCGGCGGCGAGCCGGCCCGCGCCGTCAGGCGGCGCGCGATCGCGGCC TATGCGAGCCAGCTGCGCGCGTTCGGCGACGCGCGGCTGGCCGATCTGGACGCGCCCGAGCGCTACTGGCTCGCCGAGCG CCGCGCCCGGACGCGCTGA
Upstream 100 bases:
>100_bases GCGACACGCTCGCGGCATGGGCGGGCAGGGGCCTCGACACGCTGCGTGCCGAGAACGGCGTGGCGATGAGCGAGGCGGTG CCGGCGGCCGATGCGCCCGC
Downstream 100 bases:
>100_bases GGGCGCGCTCAGCGCCGCGCCGCAGGCGGGGCCTCGGCGCTCCACACCTCGAGCAGGAAATCGGCGTCGTCCACCCGCGT GCGCGCATGCAGCCCGGCCT
Product: LmbE family protein
Products: NA
Alternate protein names: LmbE-Like Protein
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSTVPRRGRPGFEPPRGAAGTMPAGRRAWSRTGAAAVRAALDARAPLFVVSPHLDDAVFGCASLLATRPGTVVCTVFAGL PAPPQCRPWDAAGGFADSTAALRERIREDDEALRICGARGLRLPFLDGQYGPPPGQQALARALAAQLARCPGAVPLVPLG LHHPDHRCVADAWQLLARRQRRRAWLVYEEAIHRGVPGVTAARLHRLERAGWRLTPLRAGWSAARGGEPARAVRRRAIAA YASQLRAFGDARLADLDAPERYWLAERRARTR
Sequences:
>Translated_272_residues MSTVPRRGRPGFEPPRGAAGTMPAGRRAWSRTGAAAVRAALDARAPLFVVSPHLDDAVFGCASLLATRPGTVVCTVFAGL PAPPQCRPWDAAGGFADSTAALRERIREDDEALRICGARGLRLPFLDGQYGPPPGQQALARALAAQLARCPGAVPLVPLG LHHPDHRCVADAWQLLARRQRRRAWLVYEEAIHRGVPGVTAARLHRLERAGWRLTPLRAGWSAARGGEPARAVRRRAIAA YASQLRAFGDARLADLDAPERYWLAERRARTR >Mature_271_residues STVPRRGRPGFEPPRGAAGTMPAGRRAWSRTGAAAVRAALDARAPLFVVSPHLDDAVFGCASLLATRPGTVVCTVFAGLP APPQCRPWDAAGGFADSTAALRERIREDDEALRICGARGLRLPFLDGQYGPPPGQQALARALAAQLARCPGAVPLVPLGL HHPDHRCVADAWQLLARRQRRRAWLVYEEAIHRGVPGVTAARLHRLERAGWRLTPLRAGWSAARGGEPARAVRRRAIAAY ASQLRAFGDARLADLDAPERYWLAERRARTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29490; Mature: 29359
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVPRRGRPGFEPPRGAAGTMPAGRRAWSRTGAAAVRAALDARAPLFVVSPHLDDAVFG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH CASLLATRPGTVVCTVFAGLPAPPQCRPWDAAGGFADSTAALRERIREDDEALRICGARG HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCC LRLPFLDGQYGPPPGQQALARALAAQLARCPGAVPLVPLGLHHPDHRCVADAWQLLARRQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHH RRRAWLVYEEAIHRGVPGVTAARLHRLERAGWRLTPLRAGWSAARGGEPARAVRRRAIAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH YASQLRAFGDARLADLDAPERYWLAERRARTR HHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure STVPRRGRPGFEPPRGAAGTMPAGRRAWSRTGAAAVRAALDARAPLFVVSPHLDDAVFG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH CASLLATRPGTVVCTVFAGLPAPPQCRPWDAAGGFADSTAALRERIREDDEALRICGARG HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCC LRLPFLDGQYGPPPGQQALARALAAQLARCPGAVPLVPLGLHHPDHRCVADAWQLLARRQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHH RRRAWLVYEEAIHRGVPGVTAARLHRLERAGWRLTPLRAGWSAARGGEPARAVRRRAIAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH YASQLRAFGDARLADLDAPERYWLAERRARTR HHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA