| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is purA1 [H]
Identifier: 238027082
GI number: 238027082
Start: 1607251
End: 1608597
Strand: Direct
Name: purA1 [H]
Synonym: bglu_1g14610
Alternate gene names: 238027082
Gene position: 1607251-1608597 (Clockwise)
Preceding gene: 238027081
Following gene: 238027083
Centisome position: 41.14
GC content: 66.74
Gene sequence:
>1347_bases ATGTCTGCCAGCGCAGTGAATGTGACTCCCGGGCGCAATGTCGTCGTCGTGGGAACCCAGTGGGGAGATGAAGGCAAGGG CAAGATCGTCGACTGGCTGACGGACCACGCGCAAGGCGTCGTTCGTTTCCAAGGCGGTCACAACGCCGGGCACACGCTCA TCATCGGCGGCAAGAAAACCATCTTGCGCCTCATTCCTTCCGGCATCATGCGCGCGGGCGTGGCCTGCTACATCGGCAAC GGCGTCGTGCTGTCGCCCGAGGCGCTGTTCAAGGAAATCGGCGAACTCGAGGAAGCCGGGCTCGACGTCCAGTCGCGGCT GTTCATTTCCGAGGCCGCCACGCTGATCCTGCCGTACCACGTCGCGATCGACCAGGCGCGCGAGGCGCGCCGCGGCGCCG ACAAGATCGGCACCACGGGCCGCGGCATCGGCCCGGCCTACGAGGACAAGGTGGGCCGCCGCGCGCTGCGCGTGCAGGAC CTGTTCGACGCGAAGACCTTCGCCGACCGTCTGCGCGACAATCTCGATTTCCACAACTTCGTGCTGACCCAGTATCTCGG CGGCGCGGCTGTCGATTTCCAGGCGACGCTCGACACCATGCTCGGTTACGTCGATCGTCTCAAGCCGATGGTCACGGACG TCTCGCGGCGCCTGTACGACGCGAACAACGCCGGCCAGAACCTGCTGTTCGAAGGCGCGCAGGGTACGCTGCTCGACATC GACCACGGCACCTATCCGTTCGTCACGTCGAGCAACTGCGTGGCCGGCGCGGCCACGTCGGGTGCCGGCATCGGCCCGCA GAAGCTCAACTACATCCTCGGCATCACCAAGGCCTACTGCACGCGCGTCGGCGCTGGCCCGTTCCCGAGCGAACTGTACG ACGCGGACAATCCCGCGCGCCAGAGCCCGGTCGGCGTCACGCTGGCCAACGTCGGCAAGGAGTTCGGTTCGGTCACGGGC CGCCCGCGCCGCACCGGCTGGCTCGACGCGGCTGCGCTGCGCCGTTCGATCCAGATCAACGGCGTATCGGGCCTCTGCAT GACCAAGCTCGATGTGCTCGACGGCCTCGACGAAGTCCAGCTCTGCGTCGGCTACAAGATCGACGGCAAGGACGTGGACC TGCTGCCGCGCGGCGCGGCCGACGTCGCACGCTGTGAGCCGGTCTACGAAACGTTTGGCGGCTGGAAGGAAAGCACGGTG GGCATCGATTCGTGGGAGGCGCTGCCGGCCAACGCGCAGGCTTACCTGACGCGCGTGCAGGAAGTGGCCGGCGTGCCGAT CGACATGGTGTCGACCGGCCCCGATCGCGACGAAACGATCCTGCTGCGCCATCCGTTCAAGGTCTGA
Upstream 100 bases:
>100_bases TGCCTTGTCGTCGGCGCGAAGCCGTTGAAGCGAAACGGAAAAATTCGGAACCCGCGCCGAACCTATGTAGAATACGTTTT TAACCAGCTAACGAATCAAC
Downstream 100 bases:
>100_bases TTGCACGATGACGCAAACCAATCACGGCGCGCCGATCGCGATGGCCGATCCGCGCAACGACGACAAGAACCTCTGGGTCG GCTGGGACGAATATCATCGG
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase 1; AdSS 1; IMP--aspartate ligase 1 [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMRAGVACYIGN GVVLSPEALFKEIGELEEAGLDVQSRLFISEAATLILPYHVAIDQAREARRGADKIGTTGRGIGPAYEDKVGRRALRVQD LFDAKTFADRLRDNLDFHNFVLTQYLGGAAVDFQATLDTMLGYVDRLKPMVTDVSRRLYDANNAGQNLLFEGAQGTLLDI DHGTYPFVTSSNCVAGAATSGAGIGPQKLNYILGITKAYCTRVGAGPFPSELYDADNPARQSPVGVTLANVGKEFGSVTG RPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVQLCVGYKIDGKDVDLLPRGAADVARCEPVYETFGGWKESTV GIDSWEALPANAQAYLTRVQEVAGVPIDMVSTGPDRDETILLRHPFKV
Sequences:
>Translated_448_residues MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMRAGVACYIGN GVVLSPEALFKEIGELEEAGLDVQSRLFISEAATLILPYHVAIDQAREARRGADKIGTTGRGIGPAYEDKVGRRALRVQD LFDAKTFADRLRDNLDFHNFVLTQYLGGAAVDFQATLDTMLGYVDRLKPMVTDVSRRLYDANNAGQNLLFEGAQGTLLDI DHGTYPFVTSSNCVAGAATSGAGIGPQKLNYILGITKAYCTRVGAGPFPSELYDADNPARQSPVGVTLANVGKEFGSVTG RPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVQLCVGYKIDGKDVDLLPRGAADVARCEPVYETFGGWKESTV GIDSWEALPANAQAYLTRVQEVAGVPIDMVSTGPDRDETILLRHPFKV >Mature_447_residues SASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMRAGVACYIGNG VVLSPEALFKEIGELEEAGLDVQSRLFISEAATLILPYHVAIDQAREARRGADKIGTTGRGIGPAYEDKVGRRALRVQDL FDAKTFADRLRDNLDFHNFVLTQYLGGAAVDFQATLDTMLGYVDRLKPMVTDVSRRLYDANNAGQNLLFEGAQGTLLDID HGTYPFVTSSNCVAGAATSGAGIGPQKLNYILGITKAYCTRVGAGPFPSELYDADNPARQSPVGVTLANVGKEFGSVTGR PRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVQLCVGYKIDGKDVDLLPRGAADVARCEPVYETFGGWKESTVG IDSWEALPANAQAYLTRVQEVAGVPIDMVSTGPDRDETILLRHPFKV
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=440, Percent_Identity=41.8181818181818, Blast_Score=331, Evalue=9e-91, Organism=Homo sapiens, GI34577063, Length=443, Percent_Identity=38.3747178329571, Blast_Score=305, Evalue=7e-83, Organism=Homo sapiens, GI40316944, Length=405, Percent_Identity=40.4938271604938, Blast_Score=296, Evalue=4e-80, Organism=Escherichia coli, GI1790620, Length=437, Percent_Identity=59.7254004576659, Blast_Score=532, Evalue=1e-152, Organism=Caenorhabditis elegans, GI25146553, Length=439, Percent_Identity=39.8633257403189, Blast_Score=310, Evalue=1e-84, Organism=Caenorhabditis elegans, GI25146555, Length=436, Percent_Identity=39.9082568807339, Blast_Score=310, Evalue=1e-84, Organism=Saccharomyces cerevisiae, GI6324109, Length=437, Percent_Identity=40.2745995423341, Blast_Score=320, Evalue=2e-88, Organism=Drosophila melanogaster, GI21356033, Length=456, Percent_Identity=38.3771929824561, Blast_Score=310, Evalue=1e-84,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 48033; Mature: 47902
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKT CCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHH ILRLIPSGIMRAGVACYIGNGVVLSPEALFKEIGELEEAGLDVQSRLFISEAATLILPYH HHHHHHHHHHHCCEEEEECCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEHH VAIDQAREARRGADKIGTTGRGIGPAYEDKVGRRALRVQDLFDAKTFADRLRDNLDFHNF HHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VLTQYLGGAAVDFQATLDTMLGYVDRLKPMVTDVSRRLYDANNAGQNLLFEGAQGTLLDI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEC DHGTYPFVTSSNCVAGAATSGAGIGPQKLNYILGITKAYCTRVGAGPFPSELYDADNPAR CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC QSPVGVTLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVQ CCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE LCVGYKIDGKDVDLLPRGAADVARCEPVYETFGGWKESTVGIDSWEALPANAQAYLTRVQ EEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EVAGVPIDMVSTGPDRDETILLRHPFKV HHHCCCEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure SASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKT CCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHH ILRLIPSGIMRAGVACYIGNGVVLSPEALFKEIGELEEAGLDVQSRLFISEAATLILPYH HHHHHHHHHHHCCEEEEECCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEHH VAIDQAREARRGADKIGTTGRGIGPAYEDKVGRRALRVQDLFDAKTFADRLRDNLDFHNF HHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VLTQYLGGAAVDFQATLDTMLGYVDRLKPMVTDVSRRLYDANNAGQNLLFEGAQGTLLDI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEC DHGTYPFVTSSNCVAGAATSGAGIGPQKLNYILGITKAYCTRVGAGPFPSELYDADNPAR CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC QSPVGVTLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVQ CCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE LCVGYKIDGKDVDLLPRGAADVARCEPVYETFGGWKESTVGIDSWEALPANAQAYLTRVQ EEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EVAGVPIDMVSTGPDRDETILLRHPFKV HHHCCCEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA