Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027064

Identifier: 238027064

GI number: 238027064

Start: 1588330

End: 1589106

Strand: Direct

Name: 238027064

Synonym: bglu_1g14430

Alternate gene names: NA

Gene position: 1588330-1589106 (Clockwise)

Preceding gene: 238027063

Following gene: 238027066

Centisome position: 40.66

GC content: 65.25

Gene sequence:

>777_bases
ATGACTCCGATTCTGGTATTTGACATCGAGACGATTCCCGATGTCGACGGCATCCGCCGTCTTGAAGACCTGCCGTCCGA
CCTCTCCGACGCGGAAGTGGCCGAGCATGCATTCGATGCGCGCCGCGAGAAGACCGGCAGCGATTTCCTGCCGCATCATC
TGCAGCGCGTTGCGGCGATTTCCTGCGTGTTCCGCGACAAGGGCGGGTTCCGCGTCCGCTCGCTCGGCACCGCGCAGGAC
GGCGAGGCCGCGCTGATCCAGTCGTTCTACCGCACCATCGAGAAATACACGCCGCAACTCGTCTCGTGGAACGGCGGCGG
CTTCGACCTGCCGGTGCTTCACTACCGCGCGCTGGTGCACGGCATCGCGGCGCCGCGCTACTGGGACATGGGCGAGGACG
ATCGCGAGTTCAAGTGGAACAACTACCTGTCGCGCTATCACAGCCGGCATACCGACCTGATGGACCTGCTCGCGCTCTAC
CAGCCGCGCGCGAGCGCCCCGCTCGATGCAATGGCCAGGCTGTGCGGCTTTCCGGGCAAGCTCGGGATGGACGGCGGCCA
GGTATGGGAGGCTTATCGCGACGGCCAGATCGACGACATCCGTCATTATTGCGAGACCGACGTCGTCAATACCTACCTGC
TGTACTGCCGCTTTCAGATGATGCGCGGCGGGCTCACGCCCCCCGAGTATGCCGACGAGATCCGGCTCGTGAAGGAGGCG
CTCGCGGCCGAGCCGGCGCCGCATTGGGCCCAGTACCTGGCGGCGTTCCCCAAGTAG

Upstream 100 bases:

>100_bases
CGCGAGCGCGTCCGGCAGATCCAGCAGGAAGCGCTGGTACGCCTGAAGCGGTTCTTCGCCTCCAATGGCGTTCGCAAGGA
CGCCGTTCTGTAACCGATTG

Downstream 100 bases:

>100_bases
GCGGCAGCGCGTTTGTCCGGGCCGCCCGCGCGCCGGCCCGGCGTGAACCGCGCGGCAGCGCCCTGGTCAGTCGCGCAGTT
CGAGCAGGATCGGCTGGTGA

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTPILVFDIETIPDVDGIRRLEDLPSDLSDAEVAEHAFDARREKTGSDFLPHHLQRVAAISCVFRDKGGFRVRSLGTAQD
GEAALIQSFYRTIEKYTPQLVSWNGGGFDLPVLHYRALVHGIAAPRYWDMGEDDREFKWNNYLSRYHSRHTDLMDLLALY
QPRASAPLDAMARLCGFPGKLGMDGGQVWEAYRDGQIDDIRHYCETDVVNTYLLYCRFQMMRGGLTPPEYADEIRLVKEA
LAAEPAPHWAQYLAAFPK

Sequences:

>Translated_258_residues
MTPILVFDIETIPDVDGIRRLEDLPSDLSDAEVAEHAFDARREKTGSDFLPHHLQRVAAISCVFRDKGGFRVRSLGTAQD
GEAALIQSFYRTIEKYTPQLVSWNGGGFDLPVLHYRALVHGIAAPRYWDMGEDDREFKWNNYLSRYHSRHTDLMDLLALY
QPRASAPLDAMARLCGFPGKLGMDGGQVWEAYRDGQIDDIRHYCETDVVNTYLLYCRFQMMRGGLTPPEYADEIRLVKEA
LAAEPAPHWAQYLAAFPK
>Mature_257_residues
TPILVFDIETIPDVDGIRRLEDLPSDLSDAEVAEHAFDARREKTGSDFLPHHLQRVAAISCVFRDKGGFRVRSLGTAQDG
EAALIQSFYRTIEKYTPQLVSWNGGGFDLPVLHYRALVHGIAAPRYWDMGEDDREFKWNNYLSRYHSRHTDLMDLLALYQ
PRASAPLDAMARLCGFPGKLGMDGGQVWEAYRDGQIDDIRHYCETDVVNTYLLYCRFQMMRGGLTPPEYADEIRLVKEAL
AAEPAPHWAQYLAAFPK

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29372; Mature: 29240

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPILVFDIETIPDVDGIRRLEDLPSDLSDAEVAEHAFDARREKTGSDFLPHHLQRVAAI
CCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SCVFRDKGGFRVRSLGTAQDGEAALIQSFYRTIEKYTPQLVSWNGGGFDLPVLHYRALVH
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
GIAAPRYWDMGEDDREFKWNNYLSRYHSRHTDLMDLLALYQPRASAPLDAMARLCGFPGK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
LGMDGGQVWEAYRDGQIDDIRHYCETDVVNTYLLYCRFQMMRGGLTPPEYADEIRLVKEA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LAAEPAPHWAQYLAAFPK
HHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TPILVFDIETIPDVDGIRRLEDLPSDLSDAEVAEHAFDARREKTGSDFLPHHLQRVAAI
CCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SCVFRDKGGFRVRSLGTAQDGEAALIQSFYRTIEKYTPQLVSWNGGGFDLPVLHYRALVH
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
GIAAPRYWDMGEDDREFKWNNYLSRYHSRHTDLMDLLALYQPRASAPLDAMARLCGFPGK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
LGMDGGQVWEAYRDGQIDDIRHYCETDVVNTYLLYCRFQMMRGGLTPPEYADEIRLVKEA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LAAEPAPHWAQYLAAFPK
HHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA