| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yghU [H]
Identifier: 238026736
GI number: 238026736
Start: 1199547
End: 1200413
Strand: Reverse
Name: yghU [H]
Synonym: bglu_1g10940
Alternate gene names: 238026736
Gene position: 1200413-1199547 (Counterclockwise)
Preceding gene: 238026738
Following gene: 238026730
Centisome position: 30.73
GC content: 69.09
Gene sequence:
>867_bases ATGAGTCAGGATTCCGTCTATGTCCCCCCGGCCGTCTGGACGCAGCGCGCGCCATCCGGCGGCCAGTTCGCGAACATCAA CCGCCCGGTGGCCGGCGCGACCCATGACAAGCCGCTGCCGGTCGGCAAGCATCCGCTGCAGCTCTATTCGCTGGCCACCC CGAACGGCGTGAAGGTCGGCGTGATGCTCGAGGAACTGCTCGCGCTCGGCCATGCGGGCGCCGAGTACGACGCCTGGCTG ATCCGCATCGGCGAGGGCGACCAGTTCGGCAGCGGCTTCGTGGAGATCAACCCGAATTCGAAGATCCCGGCGCTGGTCGA CCGCAGCGGCGCCGCGCCGGTGCGCGTGTTCGAATCGGGCTCGATCCTGCTCTACCTGGCCGACAAGTTCGGCGCGCTGG TGCCGGCCGATCCGGCCGCGCGCGCGGAAACGCTGAACTGGCTGTTCTGGCAGATGGGCTCGGCACCCTACGTGGGCGGC GGCTTCGGGCACTTCTACGCCTATGCGCCCGAGAAGCTCGAATATCCGATCGACCGCTTCACGATGGAGACCAAGCGCCA GCTCGACGTCCTGAACCGCCTGCTCGCCGGACGCCGCTATATCGCCGGCGACGACTACACGATCGCCGACATCGCCATCT GGCCGTGGTACGGCGGCCTCGTACAGGGCGAGCTGTACGGCGCGGCCGAGTTCCTCAACGTCGGCGAATACACGCACCTG CTGCGCTGGGCCGACGAGATCGCCGCGCGGCCGGCCGTCAAGCGCGGGCGCCACGTCAACCGCGTGCGCGGCGAGGCCTC GGAACAGCAGCACGAACGCCACGACAGCGCCGACCTCGACCGCTTCGCACCGGCCAGGCGCGCATAA
Upstream 100 bases:
>100_bases GTAGCGGGTTCGGCGCGCTGCTGCAGCGAGGCGCCGCGCGCGCCCCTTCGCCCCGCGGCCTCGCACGCGGGCGGTCGATG CCCTTTTCGGAGAACATTGC
Downstream 100 bases:
>100_bases CAGCCCGTCACCGCACGCCACGGCCCATCCCGGCATGCCGGCGCGTGCGCGCGTCAATGCAGGCGCATCGACAGCTCGAC GTCGCCGCCGAACGGCGTCG
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSQDSVYVPPAVWTQRAPSGGQFANINRPVAGATHDKPLPVGKHPLQLYSLATPNGVKVGVMLEELLALGHAGAEYDAWL IRIGEGDQFGSGFVEINPNSKIPALVDRSGAAPVRVFESGSILLYLADKFGALVPADPAARAETLNWLFWQMGSAPYVGG GFGHFYAYAPEKLEYPIDRFTMETKRQLDVLNRLLAGRRYIAGDDYTIADIAIWPWYGGLVQGELYGAAEFLNVGEYTHL LRWADEIAARPAVKRGRHVNRVRGEASEQQHERHDSADLDRFAPARRA
Sequences:
>Translated_288_residues MSQDSVYVPPAVWTQRAPSGGQFANINRPVAGATHDKPLPVGKHPLQLYSLATPNGVKVGVMLEELLALGHAGAEYDAWL IRIGEGDQFGSGFVEINPNSKIPALVDRSGAAPVRVFESGSILLYLADKFGALVPADPAARAETLNWLFWQMGSAPYVGG GFGHFYAYAPEKLEYPIDRFTMETKRQLDVLNRLLAGRRYIAGDDYTIADIAIWPWYGGLVQGELYGAAEFLNVGEYTHL LRWADEIAARPAVKRGRHVNRVRGEASEQQHERHDSADLDRFAPARRA >Mature_287_residues SQDSVYVPPAVWTQRAPSGGQFANINRPVAGATHDKPLPVGKHPLQLYSLATPNGVKVGVMLEELLALGHAGAEYDAWLI RIGEGDQFGSGFVEINPNSKIPALVDRSGAAPVRVFESGSILLYLADKFGALVPADPAARAETLNWLFWQMGSAPYVGGG FGHFYAYAPEKLEYPIDRFTMETKRQLDVLNRLLAGRRYIAGDDYTIADIAIWPWYGGLVQGELYGAAEFLNVGEYTHLL RWADEIAARPAVKRGRHVNRVRGEASEQQHERHDSADLDRFAPARRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=284, Percent_Identity=66.1971830985916, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=39.906103286385, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI87081789, Length=186, Percent_Identity=30.1075268817204, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324100, Length=266, Percent_Identity=28.9473684210526, Blast_Score=96, Evalue=6e-21, Organism=Drosophila melanogaster, GI28571670, Length=178, Percent_Identity=29.2134831460674, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI17864592, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI17864598, Length=177, Percent_Identity=29.9435028248588, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI45549270, Length=200, Percent_Identity=28, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864594, Length=209, Percent_Identity=27.7511961722488, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI85725204, Length=182, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI17737923, Length=182, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 31713; Mature: 31582
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDSVYVPPAVWTQRAPSGGQFANINRPVAGATHDKPLPVGKHPLQLYSLATPNGVKVG CCCCCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEH VMLEELLALGHAGAEYDAWLIRIGEGDQFGSGFVEINPNSKIPALVDRSGAAPVRVFESG HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEECCCCCCEEEEECC SILLYLADKFGALVPADPAARAETLNWLFWQMGSAPYVGGGFGHFYAYAPEKLEYPIDRF CEEEEEECCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHEEECCHHHCCCHHHH TMETKRQLDVLNRLLAGRRYIAGDDYTIADIAIWPWYGGLVQGELYGAAEFLNVGEYTHL HHHHHHHHHHHHHHHHCCEEECCCCEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHH LRWADEIAARPAVKRGRHVNRVRGEASEQQHERHDSADLDRFAPARRA HHHHHHHHCCHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure SQDSVYVPPAVWTQRAPSGGQFANINRPVAGATHDKPLPVGKHPLQLYSLATPNGVKVG CCCCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEH VMLEELLALGHAGAEYDAWLIRIGEGDQFGSGFVEINPNSKIPALVDRSGAAPVRVFESG HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEECCCCCCEEEEECC SILLYLADKFGALVPADPAARAETLNWLFWQMGSAPYVGGGFGHFYAYAPEKLEYPIDRF CEEEEEECCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHEEECCHHHCCCHHHH TMETKRQLDVLNRLLAGRRYIAGDDYTIADIAIWPWYGGLVQGELYGAAEFLNVGEYTHL HHHHHHHHHHHHHHHHCCEEECCCCEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHH LRWADEIAARPAVKRGRHVNRVRGEASEQQHERHDSADLDRFAPARRA HHHHHHHHCCHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]