Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026722

Identifier: 238026722

GI number: 238026722

Start: 1177321

End: 1178553

Strand: Reverse

Name: 238026722

Synonym: bglu_1g10790

Alternate gene names: NA

Gene position: 1178553-1177321 (Counterclockwise)

Preceding gene: 238026724

Following gene: 238026721

Centisome position: 30.17

GC content: 68.21

Gene sequence:

>1233_bases
ATGCATGCAGCTTTCTCGCGATTTCGCCGCCCGTCGACATCGAGCGCTCCCCGCACGGCCGGCGACCTCGGCCACGATGT
CCCGGCCGTGGATGCCGGAGACCCCAATTCCGTCGTCATGGAGATCTTCTCGGCACATCGCGAGATGGGCAGCCTGGCAG
TGCTCGAGGACGGACGCCCGATTGGTCTGATCAATCGCAACATCTTCATGTCGCAGATGAGCAAGCCGTTTCATCGCGAG
CTGTACGACAAGAAGAGCTGCATCGCCTTCATGGACAAGGAACCGCTGGTGGTGGACGCCGACGTCGACATCGAGTCGCT
GGCGTTCCGCACCGTCGAGACCGGCGACAAGGCCCTCGTCGACGGCTTCATCGTGACGCGCAACGGCCGCTTCTCGGGCC
TGGGCAGCGGCCTGCAACTGGTGAACGCGGTGGCCGAGATGCAGGCGGAGAAGAACCGCCAGATCATGCAGAGCATCGAG
TACGCGAGCGTGATCCAGCGCGCCATGCTGCGCGCCTCCAGCGAAACGCTTTCGACCCGGCTGCACGACGCGGCGATGGC
CTGGGAGCCGCGCGACGTGGTGGGCGGCGACTTCTATCATTTCTCGGCGCTGCCGCACGGCTGGTTCGGCGCGGTGGCCG
ACTGCACCGGCCACGGCGTGCCGGGCGCCTTCATGACGATGCTCGCCTCGGCGTCGCTGTCCAAGGAACTCGAGCAACTC
GGGCCCTGCGATCCGGCCGCGCTGCTCGCGGCGGTCAACCGCAACGTCAAGAGCCTGCTCGGGCAGGCCAACGACTCGGC
CGAGCGCGCGCAGTCGAACGACGGCCTCGACGCCGCGATGATCTGGTTCGACGCCGCGCGCAGCGTGCTGCACTTCGCCG
GCGCGCGCATCGCGCTGCACCTGCTGCCGCCCGGCAGCGCGCAGTTCGAGACGATCGCGCCGGACAAGATGGGCCTGGGC
TACGTGGACAGCCGCGAGGACTACCCCTGGCGCCTGCACTCCCTGCCGGCCGCGGCCGGCAGCCTGCTGTTCGTCTGCAC
CGACGGCCTGACCGACCAGATCGGCGGGCCGCGCAACATCTCGTTCGGGCGGCGGCGCGCGCTCGAGGTGATCCGCCAGC
ACCGCACCGAACCGCCCGCGGCGATCTGCGAGCAGCTGCGGCAAACGCTGGAGCAATGGCAAGGCGCCCAGCCGCGCCGC
GACGACGTCACGTTTTTTTGTGCTCGTATCTAA

Upstream 100 bases:

>100_bases
AGTGTGATCGAAACGGGGCCGGCTCGACCGCGCTTGTCACATAAGTTACATGTAGACCCGTTAGCGTCCGGGGTTTCTTC
ACATACCGGCTCGCGTCGCC

Downstream 100 bases:

>100_bases
TCGATTCCACGAATGTTTCAACTACTCGATCAAGACAGCGCGTTTTTCGACCTGGCGCAGCGGCGCAACGTGCTCTTCTA
TCACAAGGGTTTTTTCTCCC

Product: protein serine/threonine phosphatase

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Serine Phosphatase; Diguanylate Cyclase; Response Regulator Receiver Domain Protein; Histidine Kinase; Stage II Sporulation E Family Protein; Signal Transduction Protein; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Bacterial Signal Domain Protein; Phosphatase; Signal Domain Protein; Serine Phosphatase RsbU; Pas/Pac Sensor Protein; HAMP Domain-Containing; Sensor Kinase; EAL/GGDEF Domain-Containing Protein; CBS Sensor Hybrid Histidine Kinase; Serine/Threonine Protein Kinase; Serine Phosphatase Regulator Of Sigma Subunit; CBS Sensor Signal Transduction Histidine Kinase; CBS/GGDEF/EAL Domain-Containing Protein; Stage II Sporulation Protein E; Signaling Protein; Sigma Factor SigB Regulation Protein RsbU; EAL Domain-Containing; Sensor Histidine Kinase/Response Regulator; CBS Domain Pair-Containing PP2C Family Phosphatase

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MHAAFSRFRRPSTSSAPRTAGDLGHDVPAVDAGDPNSVVMEIFSAHREMGSLAVLEDGRPIGLINRNIFMSQMSKPFHRE
LYDKKSCIAFMDKEPLVVDADVDIESLAFRTVETGDKALVDGFIVTRNGRFSGLGSGLQLVNAVAEMQAEKNRQIMQSIE
YASVIQRAMLRASSETLSTRLHDAAMAWEPRDVVGGDFYHFSALPHGWFGAVADCTGHGVPGAFMTMLASASLSKELEQL
GPCDPAALLAAVNRNVKSLLGQANDSAERAQSNDGLDAAMIWFDAARSVLHFAGARIALHLLPPGSAQFETIAPDKMGLG
YVDSREDYPWRLHSLPAAAGSLLFVCTDGLTDQIGGPRNISFGRRRALEVIRQHRTEPPAAICEQLRQTLEQWQGAQPRR
DDVTFFCARI

Sequences:

>Translated_410_residues
MHAAFSRFRRPSTSSAPRTAGDLGHDVPAVDAGDPNSVVMEIFSAHREMGSLAVLEDGRPIGLINRNIFMSQMSKPFHRE
LYDKKSCIAFMDKEPLVVDADVDIESLAFRTVETGDKALVDGFIVTRNGRFSGLGSGLQLVNAVAEMQAEKNRQIMQSIE
YASVIQRAMLRASSETLSTRLHDAAMAWEPRDVVGGDFYHFSALPHGWFGAVADCTGHGVPGAFMTMLASASLSKELEQL
GPCDPAALLAAVNRNVKSLLGQANDSAERAQSNDGLDAAMIWFDAARSVLHFAGARIALHLLPPGSAQFETIAPDKMGLG
YVDSREDYPWRLHSLPAAAGSLLFVCTDGLTDQIGGPRNISFGRRRALEVIRQHRTEPPAAICEQLRQTLEQWQGAQPRR
DDVTFFCARI
>Mature_410_residues
MHAAFSRFRRPSTSSAPRTAGDLGHDVPAVDAGDPNSVVMEIFSAHREMGSLAVLEDGRPIGLINRNIFMSQMSKPFHRE
LYDKKSCIAFMDKEPLVVDADVDIESLAFRTVETGDKALVDGFIVTRNGRFSGLGSGLQLVNAVAEMQAEKNRQIMQSIE
YASVIQRAMLRASSETLSTRLHDAAMAWEPRDVVGGDFYHFSALPHGWFGAVADCTGHGVPGAFMTMLASASLSKELEQL
GPCDPAALLAAVNRNVKSLLGQANDSAERAQSNDGLDAAMIWFDAARSVLHFAGARIALHLLPPGSAQFETIAPDKMGLG
YVDSREDYPWRLHSLPAAAGSLLFVCTDGLTDQIGGPRNISFGRRRALEVIRQHRTEPPAAICEQLRQTLEQWQGAQPRR
DDVTFFCARI

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44737; Mature: 44737

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAAFSRFRRPSTSSAPRTAGDLGHDVPAVDAGDPNSVVMEIFSAHREMGSLAVLEDGRP
CCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCE
IGLINRNIFMSQMSKPFHRELYDKKSCIAFMDKEPLVVDADVDIESLAFRTVETGDKALV
EEEECHHHHHHHHCCHHHHHHHCCHHHEEEECCCCEEEECCCCHHHHHHHHHCCCCHHHH
DGFIVTRNGRFSGLGSGLQLVNAVAEMQAEKNRQIMQSIEYASVIQRAMLRASSETLSTR
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHDAAMAWEPRDVVGGDFYHFSALPHGWFGAVADCTGHGVPGAFMTMLASASLSKELEQL
HHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GPCDPAALLAAVNRNVKSLLGQANDSAERAQSNDGLDAAMIWFDAARSVLHFAGARIALH
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
LLPPGSAQFETIAPDKMGLGYVDSREDYPWRLHSLPAAAGSLLFVCTDGLTDQIGGPRNI
EECCCCCCCCEECCCCCCCCCCCCCCCCCEEHHCCCCCCCCEEEEEECCCHHHCCCCCCC
SFGRRRALEVIRQHRTEPPAAICEQLRQTLEQWQGAQPRRDDVTFFCARI
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MHAAFSRFRRPSTSSAPRTAGDLGHDVPAVDAGDPNSVVMEIFSAHREMGSLAVLEDGRP
CCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCE
IGLINRNIFMSQMSKPFHRELYDKKSCIAFMDKEPLVVDADVDIESLAFRTVETGDKALV
EEEECHHHHHHHHCCHHHHHHHCCHHHEEEECCCCEEEECCCCHHHHHHHHHCCCCHHHH
DGFIVTRNGRFSGLGSGLQLVNAVAEMQAEKNRQIMQSIEYASVIQRAMLRASSETLSTR
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHDAAMAWEPRDVVGGDFYHFSALPHGWFGAVADCTGHGVPGAFMTMLASASLSKELEQL
HHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GPCDPAALLAAVNRNVKSLLGQANDSAERAQSNDGLDAAMIWFDAARSVLHFAGARIALH
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
LLPPGSAQFETIAPDKMGLGYVDSREDYPWRLHSLPAAAGSLLFVCTDGLTDQIGGPRNI
EECCCCCCCCEECCCCCCCCCCCCCCCCCEEHHCCCCCCCCEEEEEECCCHHHCCCCCCC
SFGRRRALEVIRQHRTEPPAAICEQLRQTLEQWQGAQPRRDDVTFFCARI
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA