| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is feoB [H]
Identifier: 238026717
GI number: 238026717
Start: 1173267
End: 1175135
Strand: Reverse
Name: feoB [H]
Synonym: bglu_1g10740
Alternate gene names: 238026717
Gene position: 1175135-1173267 (Counterclockwise)
Preceding gene: 238026718
Following gene: 238026716
Centisome position: 30.08
GC content: 71.27
Gene sequence:
>1869_bases ATGAGTACGCTTTCCCTGCGCGTCGCCCTGGTCGGCAGCCCCAACTGCGGCAAGACCGCCCTCTTCAACCAGCTCACCGG CGCACGCCAGAAGGTCGCGAACTACGCGGGCGTGACCGTCGAGCGCAAGGCCGGGCAATGCCTCACGCGCTCGGGCCGCA CCCTCCACCTGCTCGATCTGCCCGGCGCCTACAGCCTCGAATCGGCGAGCCCCGACGAGCGCGTCACGCGCGACCTGCTG CTCGGGCGCCAGGCCGGCGAGGCCGTGCCGGACCTGATCGTCTGCGTGATCGACGCCACCAACCTGCGCCTGCACCTGCG CTTCTTGCTCGAGATCCAGCGCCTCGGGCGGCCGGTGCTGGTGGCCTTGAACATGATGGACGAGGCCGCGCGGCGCGGCA TCGGCATCGACGTCGCCACGCTCGAACGCGAGCTCGGCCTGCCGATCGTCGAGACGGTGGCCGTCAAGCGGGGCGGGGCC GATGCGCTGATCGCCGCGCTCGACGCGCACGCCCCCCGTGACGACGCGCGCACCGGCACGCCCGCCGCGATCGCGGCCGG CACCGCCGGCGCGCCGCCCGCCGACATCCACGCCCGGGCGCGCGCGCTGCTGGCCGCGGCCGTGACGATGCCGCGCGCCA CCGACGCACGCGACGACCGGCTCGACCGCTGGGCGCTGCATCCCGTGTTCGGCCTGCTGATCCTCGCGGCCGTGATGTTC GTCACGTTCCAGGCCGTCTACTCGATCGGCAAGCCGCTCACCGACGCGATCGGCGACGGCTTCGGCTGGCTCGGCACGGT GCTCGGCGCGTGGCTGCCCGACGGGCCGCTGCGCAGCCTGCTCACCGACGGCATCCTGACCGGCCTGGGCACGGTGCTCG GCTTCCTGCCGGAGATCCTCGTGCTGTTCCTGTTCATCCTGGTGCTGGAAGAATCGGGCTACCTGCCGCGCGCGGCGTTC CTGCTCGACCGGATGATGCTGTCGGTGGGCCTGACGGGCCGCTCCTTCATCCCGCTGCTGTCGAGCTTTGCCTGCGCGAT TCCCGGCATCCTCGGCACGCGCAGCATCGCCGACCCGCGCGACCGGCTCGCTACGATCCTGGTGGCCCCGCTGATGACCT GCTCGGCCCGGCTACCCGTGTACGCGCTGCTGATCGGCGCGTTCATCCCGGCGCATCGCGTGGCCTACCTCTTCAACCTG CAGGGCCTCGTGCTGTTCCTGCTCTACGCGGGCGGCATCGGCGGCGCGATGCTGGTGGGCTTCGTCATGAAGAAGCTGCG CGGCGACCGCGAGGAAAACGCGCTGCTGATGGAGCTGCCGTCGTACCGCATGCCGCGCGTGCGCGACATCGCCCTCGGCC TGCGCGAGCGCGGCGCGATCTTCCTCAAGCGGCTGACCGGCGTGATCCTCGCGCTGACGGTACTGATGTGGTTCGTCTCG ACGTTCCCGTCGCCGCCCGCCGGCGCGACCGGCCCGGCCATCGACTACACGTTCGCCGGCTACCTCGGCCGCAGCCTGCA GACCATCTTCGCTCCGCTCGGCTTCAACTGGCAGATCAGCCTGTCGCTGATTCCGGCGTTCGCGGCCCGCGAGACCGCCG TGGCCGCGCTCGCCACCGTCTACGCGGTGAGCGGCGGCGAGGCCGACCTCACCGGCCTCGCCCACGCGCTGAGCGCGAAC TTCTCGCTGGCCAGCGCGCTGTCGCTGATGGCCTGGTTCGCGTTCGCGCCGCAATGCATGTCGACGCTCGCGGTGATCCG GCGCGAGACGCAGTCGTGGAGGAACGTCGCGATCTCGTTCTGCTACATGTTCGGGATGGCCTACGCGGCGTCGCTCGTCA CCTATCAGATCGCGCGGGCCTTGCTGTGA
Upstream 100 bases:
>100_bases CATGGCGCGCCGATCCGGTACTGATCCAGATCGGCTCCACGCGGTTCGCGCTGCGCCGCACCGAAGCGGCGCGCGTCACG GTCACGGAGGCCCCGTCGTC
Downstream 100 bases:
>100_bases GCGGCGGGTCCGGGTGGCAGTACGCGGTGATCGGCGTGGCGGTGATCGCGAGTGGCGTGGTGACGGCGCGCCAGCTCGCG CCGGCCTGGGCGGCGCGCCG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MSTLSLRVALVGSPNCGKTALFNQLTGARQKVANYAGVTVERKAGQCLTRSGRTLHLLDLPGAYSLESASPDERVTRDLL LGRQAGEAVPDLIVCVIDATNLRLHLRFLLEIQRLGRPVLVALNMMDEAARRGIGIDVATLERELGLPIVETVAVKRGGA DALIAALDAHAPRDDARTGTPAAIAAGTAGAPPADIHARARALLAAAVTMPRATDARDDRLDRWALHPVFGLLILAAVMF VTFQAVYSIGKPLTDAIGDGFGWLGTVLGAWLPDGPLRSLLTDGILTGLGTVLGFLPEILVLFLFILVLEESGYLPRAAF LLDRMMLSVGLTGRSFIPLLSSFACAIPGILGTRSIADPRDRLATILVAPLMTCSARLPVYALLIGAFIPAHRVAYLFNL QGLVLFLLYAGGIGGAMLVGFVMKKLRGDREENALLMELPSYRMPRVRDIALGLRERGAIFLKRLTGVILALTVLMWFVS TFPSPPAGATGPAIDYTFAGYLGRSLQTIFAPLGFNWQISLSLIPAFAARETAVAALATVYAVSGGEADLTGLAHALSAN FSLASALSLMAWFAFAPQCMSTLAVIRRETQSWRNVAISFCYMFGMAYAASLVTYQIARALL
Sequences:
>Translated_622_residues MSTLSLRVALVGSPNCGKTALFNQLTGARQKVANYAGVTVERKAGQCLTRSGRTLHLLDLPGAYSLESASPDERVTRDLL LGRQAGEAVPDLIVCVIDATNLRLHLRFLLEIQRLGRPVLVALNMMDEAARRGIGIDVATLERELGLPIVETVAVKRGGA DALIAALDAHAPRDDARTGTPAAIAAGTAGAPPADIHARARALLAAAVTMPRATDARDDRLDRWALHPVFGLLILAAVMF VTFQAVYSIGKPLTDAIGDGFGWLGTVLGAWLPDGPLRSLLTDGILTGLGTVLGFLPEILVLFLFILVLEESGYLPRAAF LLDRMMLSVGLTGRSFIPLLSSFACAIPGILGTRSIADPRDRLATILVAPLMTCSARLPVYALLIGAFIPAHRVAYLFNL QGLVLFLLYAGGIGGAMLVGFVMKKLRGDREENALLMELPSYRMPRVRDIALGLRERGAIFLKRLTGVILALTVLMWFVS TFPSPPAGATGPAIDYTFAGYLGRSLQTIFAPLGFNWQISLSLIPAFAARETAVAALATVYAVSGGEADLTGLAHALSAN FSLASALSLMAWFAFAPQCMSTLAVIRRETQSWRNVAISFCYMFGMAYAASLVTYQIARALL >Mature_621_residues STLSLRVALVGSPNCGKTALFNQLTGARQKVANYAGVTVERKAGQCLTRSGRTLHLLDLPGAYSLESASPDERVTRDLLL GRQAGEAVPDLIVCVIDATNLRLHLRFLLEIQRLGRPVLVALNMMDEAARRGIGIDVATLERELGLPIVETVAVKRGGAD ALIAALDAHAPRDDARTGTPAAIAAGTAGAPPADIHARARALLAAAVTMPRATDARDDRLDRWALHPVFGLLILAAVMFV TFQAVYSIGKPLTDAIGDGFGWLGTVLGAWLPDGPLRSLLTDGILTGLGTVLGFLPEILVLFLFILVLEESGYLPRAAFL LDRMMLSVGLTGRSFIPLLSSFACAIPGILGTRSIADPRDRLATILVAPLMTCSARLPVYALLIGAFIPAHRVAYLFNLQ GLVLFLLYAGGIGGAMLVGFVMKKLRGDREENALLMELPSYRMPRVRDIALGLRERGAIFLKRLTGVILALTVLMWFVST FPSPPAGATGPAIDYTFAGYLGRSLQTIFAPLGFNWQISLSLIPAFAARETAVAALATVYAVSGGEADLTGLAHALSANF SLASALSLMAWFAFAPQCMSTLAVIRRETQSWRNVAISFCYMFGMAYAASLVTYQIARALL
Specific function: Fe(2+) uptake system, probably driven by GTP (Probable) [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=610, Percent_Identity=32.4590163934426, Blast_Score=262, Evalue=5e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 66401; Mature: 66270
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLSLRVALVGSPNCGKTALFNQLTGARQKVANYAGVTVERKAGQCLTRSGRTLHLLDL CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCEEEEEEC PGAYSLESASPDERVTRDLLLGRQAGEAVPDLIVCVIDATNLRLHLRFLLEIQRLGRPVL CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHCCCHHH VALNMMDEAARRGIGIDVATLERELGLPIVETVAVKRGGADALIAALDAHAPRDDARTGT HHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC PAAIAAGTAGAPPADIHARARALLAAAVTMPRATDARDDRLDRWALHPVFGLLILAAVMF CHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VTFQAVYSIGKPLTDAIGDGFGWLGTVLGAWLPDGPLRSLLTDGILTGLGTVLGFLPEIL HHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLFLFILVLEESGYLPRAAFLLDRMMLSVGLTGRSFIPLLSSFACAIPGILGTRSIADPR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCCCCHH DRLATILVAPLMTCSARLPVYALLIGAFIPAHRVAYLFNLQGLVLFLLYAGGIGGAMLVG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FVMKKLRGDREENALLMELPSYRMPRVRDIALGLRERGAIFLKRLTGVILALTVLMWFVS HHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPSPPAGATGPAIDYTFAGYLGRSLQTIFAPLGFNWQISLSLIPAFAARETAVAALATV HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHH YAVSGGEADLTGLAHALSANFSLASALSLMAWFAFAPQCMSTLAVIRRETQSWRNVAISF HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYMFGMAYAASLVTYQIARALL HHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure STLSLRVALVGSPNCGKTALFNQLTGARQKVANYAGVTVERKAGQCLTRSGRTLHLLDL CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCEEEEEEC PGAYSLESASPDERVTRDLLLGRQAGEAVPDLIVCVIDATNLRLHLRFLLEIQRLGRPVL CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHCCCHHH VALNMMDEAARRGIGIDVATLERELGLPIVETVAVKRGGADALIAALDAHAPRDDARTGT HHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC PAAIAAGTAGAPPADIHARARALLAAAVTMPRATDARDDRLDRWALHPVFGLLILAAVMF CHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VTFQAVYSIGKPLTDAIGDGFGWLGTVLGAWLPDGPLRSLLTDGILTGLGTVLGFLPEIL HHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLFLFILVLEESGYLPRAAFLLDRMMLSVGLTGRSFIPLLSSFACAIPGILGTRSIADPR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCCCCHH DRLATILVAPLMTCSARLPVYALLIGAFIPAHRVAYLFNLQGLVLFLLYAGGIGGAMLVG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FVMKKLRGDREENALLMELPSYRMPRVRDIALGLRERGAIFLKRLTGVILALTVLMWFVS HHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPSPPAGATGPAIDYTFAGYLGRSLQTIFAPLGFNWQISLSLIPAFAARETAVAALATV HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHH YAVSGGEADLTGLAHALSANFSLASALSLMAWFAFAPQCMSTLAVIRRETQSWRNVAISF HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYMFGMAYAASLVTYQIARALL HHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA