| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yfcG [H]
Identifier: 238026713
GI number: 238026713
Start: 1170733
End: 1171359
Strand: Reverse
Name: yfcG [H]
Synonym: bglu_1g10700
Alternate gene names: 238026713
Gene position: 1171359-1170733 (Counterclockwise)
Preceding gene: 238026716
Following gene: 238026712
Centisome position: 29.98
GC content: 62.68
Gene sequence:
>627_bases ATGACCTCCAACAGTCTCACCTTCTATACGGCGGATACGCCGAACGGGCAGAAGATAAGCATCTTCCTGTGCGAAGCCAA GCTCAGCTACGAACAGGTGAATCTGAATCTGTCGAAAGGCGAGCAGCGCGAGCCGGCCTTCCTCAAGCTCAACCCCAACG GGAAAATTCCCGTCATCGTCGACCACGAGGCCGGCGTGACGCTGTGGGAATCCGGCGCGATCCTGACCTATCTCGCCTCG AAGCACGGCCTGCTGTGGCCGAAGGACTATCGCGAGCAGGCCGTCATCAACCAGTGGCTGCAGTTCCAGATGGGCGCGAT CGGCCCGATGCTCGGCCAGCTGTGGTGGTTCACGCACGGCTCGAAGACGGGCAACACCGAGGCCATCCATCGCTACCACA ACGAAACGCACCGGCTGTACGGCGTGGTGGACCGCCAGCTCGGCGCCTTTCCCTATCTTGCCGGCAATCAGTACACGATC GCCGACATCGCCGCGTTTCCGTGGCTGCGCACCTACGACGAACTCGGCATCGATCCCACGCCATATTCCCACGTACAGCG GTGGCTCGACGCGCTCGAAAAGCGGCCCGCGGTGCGCGACGGGCTGGCCGCCGTGAAGGCCGGATAA
Upstream 100 bases:
>100_bases CCGGCGCGGCCTCGCGCGCTTGCGTGCCGGTGAGCTTCCCGGTACGATTGCATTTGCAATCGTACCGGGAACTCTGTTCA ACCTGCGGGCACGCGCCACC
Downstream 100 bases:
>100_bases GGGCGGCACCCGCGCGGCGCGAGCCGCTCGCGTCGCCGCCGCGCCCGACCCACGCAGCACCGCCATCCGAGGCTTCAGCA TGGACACGATGCTTCTCAAA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTSNSLTFYTADTPNGQKISIFLCEAKLSYEQVNLNLSKGEQREPAFLKLNPNGKIPVIVDHEAGVTLWESGAILTYLAS KHGLLWPKDYREQAVINQWLQFQMGAIGPMLGQLWWFTHGSKTGNTEAIHRYHNETHRLYGVVDRQLGAFPYLAGNQYTI ADIAAFPWLRTYDELGIDPTPYSHVQRWLDALEKRPAVRDGLAAVKAG
Sequences:
>Translated_208_residues MTSNSLTFYTADTPNGQKISIFLCEAKLSYEQVNLNLSKGEQREPAFLKLNPNGKIPVIVDHEAGVTLWESGAILTYLAS KHGLLWPKDYREQAVINQWLQFQMGAIGPMLGQLWWFTHGSKTGNTEAIHRYHNETHRLYGVVDRQLGAFPYLAGNQYTI ADIAAFPWLRTYDELGIDPTPYSHVQRWLDALEKRPAVRDGLAAVKAG >Mature_207_residues TSNSLTFYTADTPNGQKISIFLCEAKLSYEQVNLNLSKGEQREPAFLKLNPNGKIPVIVDHEAGVTLWESGAILTYLASK HGLLWPKDYREQAVINQWLQFQMGAIGPMLGQLWWFTHGSKTGNTEAIHRYHNETHRLYGVVDRQLGAFPYLAGNQYTIA DIAAFPWLRTYDELGIDPTPYSHVQRWLDALEKRPAVRDGLAAVKAG
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=208, Percent_Identity=43.75, Blast_Score=171, Evalue=3e-44, Organism=Escherichia coli, GI87082195, Length=211, Percent_Identity=36.0189573459716, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI87081789, Length=195, Percent_Identity=29.2307692307692, Blast_Score=90, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324100, Length=235, Percent_Identity=32.7659574468085, Blast_Score=128, Evalue=5e-31, Organism=Drosophila melanogaster, GI28571670, Length=170, Percent_Identity=38.2352941176471, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI17864592, Length=212, Percent_Identity=35.8490566037736, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI17864594, Length=188, Percent_Identity=32.9787234042553, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI45549270, Length=190, Percent_Identity=32.6315789473684, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI19922526, Length=204, Percent_Identity=30.8823529411765, Blast_Score=94, Evalue=5e-20, Organism=Drosophila melanogaster, GI17933730, Length=180, Percent_Identity=31.1111111111111, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI17864596, Length=201, Percent_Identity=28.8557213930348, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI17864598, Length=158, Percent_Identity=35.4430379746835, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI24646249, Length=164, Percent_Identity=35.3658536585366, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI19922532, Length=204, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI85725204, Length=164, Percent_Identity=34.7560975609756, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI17737923, Length=164, Percent_Identity=34.7560975609756, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI24654983, Length=206, Percent_Identity=31.5533980582524, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI20130115, Length=189, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI221378983, Length=199, Percent_Identity=27.1356783919598, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24646259, Length=199, Percent_Identity=27.1356783919598, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24654992, Length=208, Percent_Identity=28.3653846153846, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24646251, Length=173, Percent_Identity=31.2138728323699, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24654965, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI19922932, Length=201, Percent_Identity=29.3532338308458, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI19922528, Length=201, Percent_Identity=28.8557213930348, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24654979, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI19922160, Length=195, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23460; Mature: 23329
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNSLTFYTADTPNGQKISIFLCEAKLSYEQVNLNLSKGEQREPAFLKLNPNGKIPVIV CCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEE DHEAGVTLWESGAILTYLASKHGLLWPKDYREQAVINQWLQFQMGAIGPMLGQLWWFTHG ECCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC SKTGNTEAIHRYHNETHRLYGVVDRQLGAFPYLAGNQYTIADIAAFPWLRTYDELGIDPT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEHHHHHHCCHHHHHHHCCCCCC PYSHVQRWLDALEKRPAVRDGLAAVKAG CHHHHHHHHHHHHCCCCHHHCCHHHCCC >Mature Secondary Structure TSNSLTFYTADTPNGQKISIFLCEAKLSYEQVNLNLSKGEQREPAFLKLNPNGKIPVIV CCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEE DHEAGVTLWESGAILTYLASKHGLLWPKDYREQAVINQWLQFQMGAIGPMLGQLWWFTHG ECCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC SKTGNTEAIHRYHNETHRLYGVVDRQLGAFPYLAGNQYTIADIAAFPWLRTYDELGIDPT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEHHHHHHCCHHHHHHHCCCCCC PYSHVQRWLDALEKRPAVRDGLAAVKAG CHHHHHHHHHHHHCCCCHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]