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The map label for this gene is dapA [H]

Identifier: 238026706

GI number: 238026706

Start: 1162800

End: 1163606

Strand: Reverse

Name: dapA [H]

Synonym: bglu_1g10630

Alternate gene names: 238026706

Gene position: 1163606-1162800 (Counterclockwise)

Preceding gene: 238026707

Following gene: 238026705

Centisome position: 29.79

GC content: 69.14

Gene sequence:

>807_bases
ATGTCAACTGATTCCGCGCTCTACGTGCCGCTCGTCACGCCGCTCACGGAGCAGGGCGACGTGTGCCCGGCCGGCGTGGC
GCGGCTGATCGCGAACACCGCGCGCCACGCCACCGGCTTCATCGCCTGCCTGACTTCGGGCGAGGGCTGGCTGCTCGACG
AAACCCGCTGGGAGGCGATGCTGCGCGCCACGCTCGCCGTGGCCGGCGGCCCGCGCGTGATCGCCGGCATCGAGCGGGCG
ACCACCGCCGAGGTGACGCGCTACGCCGTCAAGGCACAGGCGCTCGGCGCGCGGGCCGTGATGTTCCCGACGCCGTTCGG
CAAGCAGGTGACGCAGGCCGACATGGTCGCGCACTTCACCGCCGTCCACGACGCGACCGACCTGAAGCTGTACATCTACA
ACGAAAGCTCGCTGTCGCAGAACACGGCGACGCTCGAGACCCTGCTCGAGATCGCTCGGCTGCCGCGCGTGGCCGGCATC
AAGGACTCGCCGCCCGAGCTGCGCAGCCAGGCCGACATCGACCGCCTGCGCGGCGCGGGGCTGGCCTACTACCTGGGCTG
GGAGCACTGGCTTTGCAACGGCCTGGAATCGGACGGCCAGACCGTCTCGCTCGCCAATCTCGAACCGGCCGTGTGCCGGC
TCGCGACGCGCTCGTCGGACCCGGCGCTGCGCAAATTCATCGGCGAGCTGACGGTGAGATTCGGGCTGGACCAGGACGAC
TGGTACCGGCACATCAAAGAGGAACTGACCGAGCGCGGCATTCTCGCGTCGAGTCAAACCGTGGCTGTGGAGGTCAATCT
GTCATGA

Upstream 100 bases:

>100_bases
TCGTTCGACGAGTCGTCGGCCGCGGGCAGCTTCCCGACCGAGCTCGAGAACCTCTATCACCGCTCGAAGGCGTTCGTGCT
GACCGGCGAGGAGTGGTTTC

Downstream 100 bases:

>100_bases
GCGAACTACAAAGGGCGTTGTACATCGCCAACCGCGCGCAAACCAAGCGCCTCACCCCGGTCGAGGACCGGCTGCTCGCC
TTCGAGCGGGACTGGACCAG

Product: dihydrodipicolinate synthetase family protein

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSTDSALYVPLVTPLTEQGDVCPAGVARLIANTARHATGFIACLTSGEGWLLDETRWEAMLRATLAVAGGPRVIAGIERA
TTAEVTRYAVKAQALGARAVMFPTPFGKQVTQADMVAHFTAVHDATDLKLYIYNESSLSQNTATLETLLEIARLPRVAGI
KDSPPELRSQADIDRLRGAGLAYYLGWEHWLCNGLESDGQTVSLANLEPAVCRLATRSSDPALRKFIGELTVRFGLDQDD
WYRHIKEELTERGILASSQTVAVEVNLS

Sequences:

>Translated_268_residues
MSTDSALYVPLVTPLTEQGDVCPAGVARLIANTARHATGFIACLTSGEGWLLDETRWEAMLRATLAVAGGPRVIAGIERA
TTAEVTRYAVKAQALGARAVMFPTPFGKQVTQADMVAHFTAVHDATDLKLYIYNESSLSQNTATLETLLEIARLPRVAGI
KDSPPELRSQADIDRLRGAGLAYYLGWEHWLCNGLESDGQTVSLANLEPAVCRLATRSSDPALRKFIGELTVRFGLDQDD
WYRHIKEELTERGILASSQTVAVEVNLS
>Mature_267_residues
STDSALYVPLVTPLTEQGDVCPAGVARLIANTARHATGFIACLTSGEGWLLDETRWEAMLRATLAVAGGPRVIAGIERAT
TAEVTRYAVKAQALGARAVMFPTPFGKQVTQADMVAHFTAVHDATDLKLYIYNESSLSQNTATLETLLEIARLPRVAGIK
DSPPELRSQADIDRLRGAGLAYYLGWEHWLCNGLESDGQTVSLANLEPAVCRLATRSSDPALRKFIGELTVRFGLDQDDW
YRHIKEELTERGILASSQTVAVEVNLS

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; first step. [C]

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1788823, Length=170, Percent_Identity=28.8235294117647, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 29128; Mature: 28997

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDSALYVPLVTPLTEQGDVCPAGVARLIANTARHATGFIACLTSGEGWLLDETRWEAM
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCEEECHHHHHHH
LRATLAVAGGPRVIAGIERATTAEVTRYAVKAQALGARAVMFPTPFGKQVTQADMVAHFT
HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
AVHDATDLKLYIYNESSLSQNTATLETLLEIARLPRVAGIKDSPPELRSQADIDRLRGAG
HHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
LAYYLGWEHWLCNGLESDGQTVSLANLEPAVCRLATRSSDPALRKFIGELTVRFGLDQDD
EEEEECHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHEECCCHHH
WYRHIKEELTERGILASSQTVAVEVNLS
HHHHHHHHHHHCCCEECCCEEEEEEECC
>Mature Secondary Structure 
STDSALYVPLVTPLTEQGDVCPAGVARLIANTARHATGFIACLTSGEGWLLDETRWEAM
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCEEECHHHHHHH
LRATLAVAGGPRVIAGIERATTAEVTRYAVKAQALGARAVMFPTPFGKQVTQADMVAHFT
HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
AVHDATDLKLYIYNESSLSQNTATLETLLEIARLPRVAGIKDSPPELRSQADIDRLRGAG
HHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
LAYYLGWEHWLCNGLESDGQTVSLANLEPAVCRLATRSSDPALRKFIGELTVRFGLDQDD
EEEEECHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHEECCCHHH
WYRHIKEELTERGILASSQTVAVEVNLS
HHHHHHHHHHHCCCEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA