Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026695

Identifier: 238026695

GI number: 238026695

Start: 1147981

End: 1149030

Strand: Reverse

Name: 238026695

Synonym: bglu_1g10510

Alternate gene names: NA

Gene position: 1149030-1147981 (Counterclockwise)

Preceding gene: 238026696

Following gene: 238026694

Centisome position: 29.41

GC content: 69.9

Gene sequence:

>1050_bases
ATGATCCCTCGTCCCTCGGCGCGATACCCGCGTCTCGCCGCGCTGCGCCGCGCGGCCGCTTCGGCGGCACTGGCGGCGCT
CGCCACGCTCGCGCCGGCCACCGGCCAGGCCCAGGAAACCGCGATCTGCTACAACTGCCCGCCCGAATGGGCCGACTGGG
CCGCGCAGATCGCGGCGATCAGGCAGGCGACGGGCATTCGCGTGCCGGCCGACAACAAGAACTCGGGCCAGGCGATCGCG
CAGCTGATCGCCGAGCAGAAAAGCCCGGTGGCCGACGTCGTCTATCTCGGCGTGTCCTCGGCCATCCAGGCCAAGCAGCG
CGGCCTGACGGAGCCGTACAAGCCGGCCCACTGGAACGAGATCCCGGCCAACCTGAAGGACCCGCAGGGTTACTGGTTCG
CGATCCACTCGGGCACGCTCGGCTTCTTCGTCAACAAGGACGCACTCGACGGCAGGCCGGTGCCGCGCTCGTGGGCCGAC
CTGCTCAAGCCCGAATACCGCGGCATGGTGGGCTACCTCGATCCGTCCAGCGCGTTCGTCGGCTATGCCGGCGCGGTGGC
CGTGAATCAGGCGCTCGGCGGCACGCTCGACGACTTCCGCCCCGCGCTCGACTGGTTCCGCAAGCTGCGCGCGAACCGGC
CGATCGTGCCGAAGCAGACCGCCTACGCGCGCGTGCTGTCGGGCGAGATCCCGATCCTGATCGGCTACGACTTCGATGCC
TATCGCGCCGAGTACCAGGACCACGCCAACGCGGCCTTCGTGATCCCCGCCGAGGGCACGATCTCGGTGCCCTATGCGAT
GAGCCTGGTGAAAAACGCACCGCACGCGGCCAACGGCCGGAAGGTGCTCGATTTCGTTCTGTCCGACGCGGGCCAGAAGC
TGTGGGCCGCGGCGTGGCTGCGGCCGGTGCGCCCGCAGGCGCTGGCGCCCGGCCTGGCCGCGAAATTCCTGCCCGCCAGC
GACTACGCGCGCGCGCGAACGGTGGATTTCGACAAGATGGCGGCCGTCCAGCAGGCGTTCGGCCAGCAGTACCTGCAGGC
GATGCAATGA

Upstream 100 bases:

>100_bases
CGGCTCGCGCTTCGTGCCGGCCGCGCCGTCGCCGGCCGGCTTCTCCATCTCGCGCCATGCGCGCTCGCCCGTCCCATCCG
TTATCGTCAGGAGGCCTGCC

Downstream 100 bases:

>100_bases
CGGCCGGCACGATGCGCGAGCTCACGTTCCCCAGCCGCTGGCGGGTCGCCCTCGTCGCGCCGGCGCTCGCGGTGTTCACC
GCTTTCTGGCTGCTGCCGAT

Product: ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MIPRPSARYPRLAALRRAAASAALAALATLAPATGQAQETAICYNCPPEWADWAAQIAAIRQATGIRVPADNKNSGQAIA
QLIAEQKSPVADVVYLGVSSAIQAKQRGLTEPYKPAHWNEIPANLKDPQGYWFAIHSGTLGFFVNKDALDGRPVPRSWAD
LLKPEYRGMVGYLDPSSAFVGYAGAVAVNQALGGTLDDFRPALDWFRKLRANRPIVPKQTAYARVLSGEIPILIGYDFDA
YRAEYQDHANAAFVIPAEGTISVPYAMSLVKNAPHAANGRKVLDFVLSDAGQKLWAAAWLRPVRPQALAPGLAAKFLPAS
DYARARTVDFDKMAAVQQAFGQQYLQAMQ

Sequences:

>Translated_349_residues
MIPRPSARYPRLAALRRAAASAALAALATLAPATGQAQETAICYNCPPEWADWAAQIAAIRQATGIRVPADNKNSGQAIA
QLIAEQKSPVADVVYLGVSSAIQAKQRGLTEPYKPAHWNEIPANLKDPQGYWFAIHSGTLGFFVNKDALDGRPVPRSWAD
LLKPEYRGMVGYLDPSSAFVGYAGAVAVNQALGGTLDDFRPALDWFRKLRANRPIVPKQTAYARVLSGEIPILIGYDFDA
YRAEYQDHANAAFVIPAEGTISVPYAMSLVKNAPHAANGRKVLDFVLSDAGQKLWAAAWLRPVRPQALAPGLAAKFLPAS
DYARARTVDFDKMAAVQQAFGQQYLQAMQ
>Mature_349_residues
MIPRPSARYPRLAALRRAAASAALAALATLAPATGQAQETAICYNCPPEWADWAAQIAAIRQATGIRVPADNKNSGQAIA
QLIAEQKSPVADVVYLGVSSAIQAKQRGLTEPYKPAHWNEIPANLKDPQGYWFAIHSGTLGFFVNKDALDGRPVPRSWAD
LLKPEYRGMVGYLDPSSAFVGYAGAVAVNQALGGTLDDFRPALDWFRKLRANRPIVPKQTAYARVLSGEIPILIGYDFDA
YRAEYQDHANAAFVIPAEGTISVPYAMSLVKNAPHAANGRKVLDFVLSDAGQKLWAAAWLRPVRPQALAPGLAAKFLPAS
DYARARTVDFDKMAAVQQAFGQQYLQAMQ

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37788; Mature: 37788

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRPSARYPRLAALRRAAASAALAALATLAPATGQAQETAICYNCPPEWADWAAQIAAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
RQATGIRVPADNKNSGQAIAQLIAEQKSPVADVVYLGVSSAIQAKQRGLTEPYKPAHWNE
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IPANLKDPQGYWFAIHSGTLGFFVNKDALDGRPVPRSWADLLKPEYRGMVGYLDPSSAFV
CCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCHHHCCEEEEECCCCHHH
GYAGAVAVNQALGGTLDDFRPALDWFRKLRANRPIVPKQTAYARVLSGEIPILIGYDFDA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCHH
YRAEYQDHANAAFVIPAEGTISVPYAMSLVKNAPHAANGRKVLDFVLSDAGQKLWAAAWL
HHHHHHHCCCEEEEEECCCCEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RPVRPQALAPGLAAKFLPASDYARARTVDFDKMAAVQQAFGQQYLQAMQ
CCCCCHHHCCCHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPRPSARYPRLAALRRAAASAALAALATLAPATGQAQETAICYNCPPEWADWAAQIAAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
RQATGIRVPADNKNSGQAIAQLIAEQKSPVADVVYLGVSSAIQAKQRGLTEPYKPAHWNE
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IPANLKDPQGYWFAIHSGTLGFFVNKDALDGRPVPRSWADLLKPEYRGMVGYLDPSSAFV
CCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCHHHCCEEEEECCCCHHH
GYAGAVAVNQALGGTLDDFRPALDWFRKLRANRPIVPKQTAYARVLSGEIPILIGYDFDA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCHH
YRAEYQDHANAAFVIPAEGTISVPYAMSLVKNAPHAANGRKVLDFVLSDAGQKLWAAAWL
HHHHHHHCCCEEEEEECCCCEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RPVRPQALAPGLAAKFLPASDYARARTVDFDKMAAVQQAFGQQYLQAMQ
CCCCCHHHCCCHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]