| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is plcN [H]
Identifier: 238026644
GI number: 238026644
Start: 1070929
End: 1073025
Strand: Reverse
Name: plcN [H]
Synonym: bglu_1g09960
Alternate gene names: 238026644
Gene position: 1073025-1070929 (Counterclockwise)
Preceding gene: 238026645
Following gene: 238026638
Centisome position: 27.47
GC content: 69.15
Gene sequence:
>2097_bases ATGACGACGAAACATCGCCGCGACTTTCTGCGCCTCGCCGCCGGCACCGCCGGCGCCGCCGCGCTCAGCGTGTTCCCGCC CGTGATCCGCAACGCGCTCGCGATTCCCGCGAGCCGCCGCACCGGCACGATCCGCGATATCGAACACATCGTGATCCTGA TGCAGGAGAACCGTTCGTTCGACCATTACTTCGGCACGCTGCGCGGCGTGCGCGGCTTCGGCGATCCGCGTCCGCTCACG CTCGCCAACGGCAAGTCGGTGTTCCATCAGCCGGCCGGCCTCGGCGAAGTGCTGCCCTTCCGTCCCACCGCGTCGAACCT CGGCCTGCAGTTCATCCAGGATCTGCCGCACGGCTGGCAGGACATGCACGCGGCCTGGAACCACGGCCGCTACGACCAGT GGGTGCCGAACAAGGGCACGACGTCGATGGCCTACCTGCAGCGCGAGGACATTCCGTTCCACTACGCGCTGGCCGACGCG TTCACGATCTGCGACGCCTACCATTGCTCGATCCCGAGCTCGACCGACCCGAACCGCTACTACATGTGGACCGGCTACGT CGGCAACGACGGCCAGGGCGGCGGCCCGGTGCTCGGCAACGAGGAAGCCGGCTACGGCTGGACCACCTATCCCGAGGTGC TCGAGAAGGCCGGCGTGTCGTGGAAGATCTACCAGGACATCGGCGAGGGCCTGAACGCGGCCGGCTCGTGGGGCTGGACC AGCAAGAACGCCTACATCGGCAACTACGGCGACAACTCGCTGCTCTACTTCAACCAGTATCGCAACGCCCAGCCGGGCAG CCCGCTGTACGACAAGGCCCGCACGGGCACCAACGTCAGCGCGGGCGGCACGCTGTTCGACGTGCTGAAGGCCGACGTCG CGAACGGCACGCTGCCGCAGGTGTCGTGGATCTGCTCGCCGGAGGCGTATTCGGAGCACCCGAACTGGCCGGCCAACTAC GGCGCCTGGTATGTCGAGCAGGTACTCGCGACGCTGACCTCGAACCCCGAGGTGTGGAGCAAGACCGCGCTGTTCATCAC CTACGACGAGAACGACGGCTTCTTCGACCACGTGCCGCCGCCGTTCGCGCCGCAGTCGCGCGACAACGGCCTGTCCACCG TGCCCACCACCAACGAGGTGTTCGCGGGCAACGCGACGCACATGGCCGGCCCCTACGGCCTCGGCCCGCGCGTGCCGATG ATCGTGGTCTCGCCGTGGACCAAGGGCGGCTGGCTCTGCTCGCAGACCTTCGATCACACCTCGCTGCTGCAGTTCATCGA GGCGCGCTTCGGCGAGCAGTACGACATCGCGGCCTCGAATATCTCGCCGTGGCGCCGCGCCGTATGCGGCGATCTGACTG CCGCGTTCGACTTCCGCGATCCGGACTCGCGCCTGCCGTCGCTGCCCGACACGAGCGGCTACGCGCCGCCCGACCGCACC ACGCACCCCGACTACGTGCCCCTGCCGCCCGTCTCGCAGGCCGTGCCGCGGCAGGAAGCCGGGCTGCGTCGGGCGCGCGC GCTGCCCTACGAGCTGTTCGTGTTCGGCCGCAACGACGCCGCGCGCGGCAAGTACAAGCTGACCTTCGCGAACGGCGGCC GGGCCGGCGCGGCGTTCCAGGTGCAGGCCGCAAACCGCATCGACGGCCCGTGGGCCTATACCGTCGAGGCAGGCAAGAAG CTCGCCGACAGCTGGAGCACGGCGGCCACGCTCGGCCTGTACGACCTTTCGGTGTACGGCCCGAACGGCTTCTTCAGCCG CTTCCGCGGCACCACCGCGGCCGGCGACGGCCACACGCCGAATCCGGAAGCGCTGTACGGCTACGACGTGATCAACGGCA ACCTCATGCTGCGCCTCACGAACCGCGGCAAGGCACCGGTGCGGCTGACCGTGTCGAACGGCTATGGCGGCCGCACGCGC ACCTGGGAGCTGTTCCCGGGCCAGCGCATCGATGACTACTGGGACCTGCGCGGCAGCCACGGCTGGTTCGACCTGACGAT CAGCGACGGCACCGCCTCCGGCTTCCTGCGCCGCTTCGCCGGCCACGTCGAGACGGGCCGCCCGAGCACCAGCGACCCGG CGATCGCCACCGTGTAA
Upstream 100 bases:
>100_bases TCTCGGCGACGACGCAGGTCGCGCCCCGCGCGACGCCGGCCGCATTTCTTTCGGCCGTCTCTGGCACGGCCGCCCATTCC CTCCGCCCAGGAAGCAACCC
Downstream 100 bases:
>100_bases ACGGCGACGGCGCCCGTCACGTAATGCGACGGGCGCCGTCCGCGGGGTTCTCGCGCCGCGCGCGCTCTCGCGCTCGCCGC CCTGCCCCGCCCCGCCGTGC
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MTTKHRRDFLRLAAGTAGAAALSVFPPVIRNALAIPASRRTGTIRDIEHIVILMQENRSFDHYFGTLRGVRGFGDPRPLT LANGKSVFHQPAGLGEVLPFRPTASNLGLQFIQDLPHGWQDMHAAWNHGRYDQWVPNKGTTSMAYLQREDIPFHYALADA FTICDAYHCSIPSSTDPNRYYMWTGYVGNDGQGGGPVLGNEEAGYGWTTYPEVLEKAGVSWKIYQDIGEGLNAAGSWGWT SKNAYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLKADVANGTLPQVSWICSPEAYSEHPNWPANY GAWYVEQVLATLTSNPEVWSKTALFITYDENDGFFDHVPPPFAPQSRDNGLSTVPTTNEVFAGNATHMAGPYGLGPRVPM IVVSPWTKGGWLCSQTFDHTSLLQFIEARFGEQYDIAASNISPWRRAVCGDLTAAFDFRDPDSRLPSLPDTSGYAPPDRT THPDYVPLPPVSQAVPRQEAGLRRARALPYELFVFGRNDAARGKYKLTFANGGRAGAAFQVQAANRIDGPWAYTVEAGKK LADSWSTAATLGLYDLSVYGPNGFFSRFRGTTAAGDGHTPNPEALYGYDVINGNLMLRLTNRGKAPVRLTVSNGYGGRTR TWELFPGQRIDDYWDLRGSHGWFDLTISDGTASGFLRRFAGHVETGRPSTSDPAIATV
Sequences:
>Translated_698_residues MTTKHRRDFLRLAAGTAGAAALSVFPPVIRNALAIPASRRTGTIRDIEHIVILMQENRSFDHYFGTLRGVRGFGDPRPLT LANGKSVFHQPAGLGEVLPFRPTASNLGLQFIQDLPHGWQDMHAAWNHGRYDQWVPNKGTTSMAYLQREDIPFHYALADA FTICDAYHCSIPSSTDPNRYYMWTGYVGNDGQGGGPVLGNEEAGYGWTTYPEVLEKAGVSWKIYQDIGEGLNAAGSWGWT SKNAYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLKADVANGTLPQVSWICSPEAYSEHPNWPANY GAWYVEQVLATLTSNPEVWSKTALFITYDENDGFFDHVPPPFAPQSRDNGLSTVPTTNEVFAGNATHMAGPYGLGPRVPM IVVSPWTKGGWLCSQTFDHTSLLQFIEARFGEQYDIAASNISPWRRAVCGDLTAAFDFRDPDSRLPSLPDTSGYAPPDRT THPDYVPLPPVSQAVPRQEAGLRRARALPYELFVFGRNDAARGKYKLTFANGGRAGAAFQVQAANRIDGPWAYTVEAGKK LADSWSTAATLGLYDLSVYGPNGFFSRFRGTTAAGDGHTPNPEALYGYDVINGNLMLRLTNRGKAPVRLTVSNGYGGRTR TWELFPGQRIDDYWDLRGSHGWFDLTISDGTASGFLRRFAGHVETGRPSTSDPAIATV >Mature_697_residues TTKHRRDFLRLAAGTAGAAALSVFPPVIRNALAIPASRRTGTIRDIEHIVILMQENRSFDHYFGTLRGVRGFGDPRPLTL ANGKSVFHQPAGLGEVLPFRPTASNLGLQFIQDLPHGWQDMHAAWNHGRYDQWVPNKGTTSMAYLQREDIPFHYALADAF TICDAYHCSIPSSTDPNRYYMWTGYVGNDGQGGGPVLGNEEAGYGWTTYPEVLEKAGVSWKIYQDIGEGLNAAGSWGWTS KNAYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLKADVANGTLPQVSWICSPEAYSEHPNWPANYG AWYVEQVLATLTSNPEVWSKTALFITYDENDGFFDHVPPPFAPQSRDNGLSTVPTTNEVFAGNATHMAGPYGLGPRVPMI VVSPWTKGGWLCSQTFDHTSLLQFIEARFGEQYDIAASNISPWRRAVCGDLTAAFDFRDPDSRLPSLPDTSGYAPPDRTT HPDYVPLPPVSQAVPRQEAGLRRARALPYELFVFGRNDAARGKYKLTFANGGRAGAAFQVQAANRIDGPWAYTVEAGKKL ADSWSTAATLGLYDLSVYGPNGFFSRFRGTTAAGDGHTPNPEALYGYDVINGNLMLRLTNRGKAPVRLTVSNGYGGRTRT WELFPGQRIDDYWDLRGSHGWFDLTISDGTASGFLRRFAGHVETGRPSTSDPAIATV
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 76592; Mature: 76461
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKHRRDFLRLAAGTAGAAALSVFPPVIRNALAIPASRRTGTIRDIEHIVILMQENRSF CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCH DHYFGTLRGVRGFGDPRPLTLANGKSVFHQPAGLGEVLPFRPTASNLGLQFIQDLPHGWQ HHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH DMHAAWNHGRYDQWVPNKGTTSMAYLQREDIPFHYALADAFTICDAYHCSIPSSTDPNRY HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEE YMWTGYVGNDGQGGGPVLGNEEAGYGWTTYPEVLEKAGVSWKIYQDIGEGLNAAGSWGWT EEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCC SKNAYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLKADVANGTLPQ CCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC VSWICSPEAYSEHPNWPANYGAWYVEQVLATLTSNPEVWSKTALFITYDENDGFFDHVPP EEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCC PFAPQSRDNGLSTVPTTNEVFAGNATHMAGPYGLGPRVPMIVVSPWTKGGWLCSQTFDHT CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCHH SLLQFIEARFGEQYDIAASNISPWRRAVCGDLTAAFDFRDPDSRLPSLPDTSGYAPPDRT HHHHHHHHHCCCCEEEECCCCCHHHHHHHHCHHEEECCCCCHHHCCCCCCCCCCCCCCCC THPDYVPLPPVSQAVPRQEAGLRRARALPYELFVFGRNDAARGKYKLTFANGGRAGAAFQ CCCCCCCCCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEE VQAANRIDGPWAYTVEAGKKLADSWSTAATLGLYDLSVYGPNGFFSRFRGTTAAGDGHTP EEECCCCCCCEEEEEHHHHHHHHCHHHHEEEEEEEEEEECCCHHHHHHCCCCCCCCCCCC NPEALYGYDVINGNLMLRLTNRGKAPVRLTVSNGYGGRTRTWELFPGQRIDDYWDLRGSH CCCEEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHCCCCCC GWFDLTISDGTASGFLRRFAGHVETGRPSTSDPAIATV CEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEECC >Mature Secondary Structure TTKHRRDFLRLAAGTAGAAALSVFPPVIRNALAIPASRRTGTIRDIEHIVILMQENRSF CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCH DHYFGTLRGVRGFGDPRPLTLANGKSVFHQPAGLGEVLPFRPTASNLGLQFIQDLPHGWQ HHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH DMHAAWNHGRYDQWVPNKGTTSMAYLQREDIPFHYALADAFTICDAYHCSIPSSTDPNRY HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEE YMWTGYVGNDGQGGGPVLGNEEAGYGWTTYPEVLEKAGVSWKIYQDIGEGLNAAGSWGWT EEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCC SKNAYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLKADVANGTLPQ CCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC VSWICSPEAYSEHPNWPANYGAWYVEQVLATLTSNPEVWSKTALFITYDENDGFFDHVPP EEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCC PFAPQSRDNGLSTVPTTNEVFAGNATHMAGPYGLGPRVPMIVVSPWTKGGWLCSQTFDHT CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCHH SLLQFIEARFGEQYDIAASNISPWRRAVCGDLTAAFDFRDPDSRLPSLPDTSGYAPPDRT HHHHHHHHHCCCCEEEECCCCCHHHHHHHHCHHEEECCCCCHHHCCCCCCCCCCCCCCCC THPDYVPLPPVSQAVPRQEAGLRRARALPYELFVFGRNDAARGKYKLTFANGGRAGAAFQ CCCCCCCCCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEE VQAANRIDGPWAYTVEAGKKLADSWSTAATLGLYDLSVYGPNGFFSRFRGTTAAGDGHTP EEECCCCCCCEEEEEHHHHHHHHCHHHHEEEEEEEEEEECCCHHHHHHCCCCCCCCCCCC NPEALYGYDVINGNLMLRLTNRGKAPVRLTVSNGYGGRTRTWELFPGQRIDDYWDLRGSH CCCEEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHCCCCCC GWFDLTISDGTASGFLRRFAGHVETGRPSTSDPAIATV CEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]