| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is otsA [H]
Identifier: 238026637
GI number: 238026637
Start: 1061831
End: 1063234
Strand: Direct
Name: otsA [H]
Synonym: bglu_1g09890
Alternate gene names: 238026637
Gene position: 1061831-1063234 (Clockwise)
Preceding gene: 238026636
Following gene: 238026639
Centisome position: 27.18
GC content: 69.23
Gene sequence:
>1404_bases ATGAGCCGGCTGATCATCGTATCGAATCGGGTCGCGCCGATCTCCGAGGGCGAACCGGCCGCGGGCGGCCTCGCTATCGG CGTCTACGACGCGCTCAAGGAAACCGGCGGCATGTGGTTCGGCTGGAGCGGCGAGGTGGTCGCCTCGGGCGCGCCGCAGA TCCGCGTGGAGGAGCGCGGCCCCGTGACGTTTGCCACGATCGGCCTCGTGCGCCGCGATTACGACCAGTACTATCGCGGC TTCTCGAACGCGACGCTATGGCCCGCGTTCCACTACCGGACCGATCTGATCCAGTACGACCGCCACGAATTCGAGGGCTA TGGCCGCGTCAACGTCTGGCTCGCGCAGCAACTGGTGCCGCTGCTGCGCGACGACGACGTGATCTGGGTCCACGACTATC ACCTGATTCCGTTCGCGCAGGCGCTGCGCGCGGCCGGCGTGAAGAACCGGATCGGCTTCTTCCTGCATATCCCGTTTCCG GCCGCCGAGGTGCTCGTCAACGTGCCGCCGCACCGCATGCTGGTCGAGGCGATGTGCTCGTACGACCTGCTCGGCTTCCA GACCGAGCCGGACTTGCGCGCGTTCTGCGACTACATCGACGCGGAGGCGCAGGGCAGCCTCGAGCGCGGCGGCGCGCCCG GCATCCGCGGCAGCGGCCCGGTGACGATCCGCGCGTTCGGCCGCGTGCTGCAGGCGCATGCCTATCCGATCGGCATCTAT CCCGACGAGATCGCCTCGCTCGCGCAGGCGGGCGCCAACGGCCGCGCGGTGCGTACGCTCGCCACCTCGCTGCACGGGCG GCAGCTCGTGATGAGCGTGGATCGCCTCGATTACTCGAAGGGGCTCGTCGAGCGCTTCCGCGCGTTCGAGAAGCTGCTCG AGCACGAGGCGTCGTACCGCAACCGCGTGTCGTTCCTGCAGATCGCGCCGTCCACGCGCGCGGACCTGCGCGCCTACCAG GACATCCGGCTGCAGCTCGAAGGCGAGTCGGGGCGCATCAACGGCCGTTACGCGGAGCTCGACTGGGCGCCGATCCTCTA CATCCACCGGCAGTACGAACGGCCGCTGCTCGCCGCGCTGTACCGGCTCGCGCGCGTCGGCTTCGTGACGCCGCTGCGCG ACGGCATGAACCTGGTCGCGAAGGAATACGTGTCGGCGCAGGACCCCGAGGACCCGGGCGTGCTGGTGCTGTCGCGCTTC GCGGGTGCCGCGCGCGAGCTGACGGGCGCGCTGATCGTCAATCCGATGGATATCGACAGCATGGCCGAGGCGCTCTCGCA GGCGCTGTCGATGCCGGTGGCCGAGCGCCGCGCGCGCTACACCGAGATGATCGCGCAGCTGCGCGAGAACAACGTCTCGG TCTGGCGCGACAACTTCCTGCGCGATCTGCAGAGGGCCGGCTGA
Upstream 100 bases:
>100_bases AGATTGGCGCGGGCGATACCACGGCGCGCGCACGGCTCGATTCGGTCGAGGCGATGCGCGCGCAGATCGCCGCCTGGATT GCGGCGGAGCCCGCCCGCGC
Downstream 100 bases:
>100_bases GCCGCGCGTCCATGAAAAAACCGCCGGCTGGACCGGCGGTTTTCGTCTCGGCTGGGCGGTGCGTCAGGCGACGCGTTCGT CGCCGAGCGTCGCGTCGTCG
Product: alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEERGPVTFATIGLVRRDYDQYYRG FSNATLWPAFHYRTDLIQYDRHEFEGYGRVNVWLAQQLVPLLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFP AAEVLVNVPPHRMLVEAMCSYDLLGFQTEPDLRAFCDYIDAEAQGSLERGGAPGIRGSGPVTIRAFGRVLQAHAYPIGIY PDEIASLAQAGANGRAVRTLATSLHGRQLVMSVDRLDYSKGLVERFRAFEKLLEHEASYRNRVSFLQIAPSTRADLRAYQ DIRLQLEGESGRINGRYAELDWAPILYIHRQYERPLLAALYRLARVGFVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRF AGAARELTGALIVNPMDIDSMAEALSQALSMPVAERRARYTEMIAQLRENNVSVWRDNFLRDLQRAG
Sequences:
>Translated_467_residues MSRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEERGPVTFATIGLVRRDYDQYYRG FSNATLWPAFHYRTDLIQYDRHEFEGYGRVNVWLAQQLVPLLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFP AAEVLVNVPPHRMLVEAMCSYDLLGFQTEPDLRAFCDYIDAEAQGSLERGGAPGIRGSGPVTIRAFGRVLQAHAYPIGIY PDEIASLAQAGANGRAVRTLATSLHGRQLVMSVDRLDYSKGLVERFRAFEKLLEHEASYRNRVSFLQIAPSTRADLRAYQ DIRLQLEGESGRINGRYAELDWAPILYIHRQYERPLLAALYRLARVGFVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRF AGAARELTGALIVNPMDIDSMAEALSQALSMPVAERRARYTEMIAQLRENNVSVWRDNFLRDLQRAG >Mature_466_residues SRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEERGPVTFATIGLVRRDYDQYYRGF SNATLWPAFHYRTDLIQYDRHEFEGYGRVNVWLAQQLVPLLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFPA AEVLVNVPPHRMLVEAMCSYDLLGFQTEPDLRAFCDYIDAEAQGSLERGGAPGIRGSGPVTIRAFGRVLQAHAYPIGIYP DEIASLAQAGANGRAVRTLATSLHGRQLVMSVDRLDYSKGLVERFRAFEKLLEHEASYRNRVSFLQIAPSTRADLRAYQD IRLQLEGESGRINGRYAELDWAPILYIHRQYERPLLAALYRLARVGFVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFA GAARELTGALIVNPMDIDSMAEALSQALSMPVAERRARYTEMIAQLRENNVSVWRDNFLRDLQRAG
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=465, Percent_Identity=52.0430107526882, Blast_Score=476, Evalue=1e-135, Organism=Caenorhabditis elegans, GI115533558, Length=420, Percent_Identity=28.3333333333333, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI115533560, Length=420, Percent_Identity=28.3333333333333, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71987012, Length=437, Percent_Identity=28.1464530892449, Blast_Score=134, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6319602, Length=477, Percent_Identity=30.8176100628931, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6323537, Length=443, Percent_Identity=26.410835214447, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320279, Length=425, Percent_Identity=25.8823529411765, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6323917, Length=408, Percent_Identity=24.2647058823529, Blast_Score=151, Evalue=2e-37, Organism=Drosophila melanogaster, GI19920676, Length=493, Percent_Identity=33.8742393509128, Blast_Score=263, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 52265; Mature: 52134
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEERG CCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCCEEECCCCEEEEECCC PVTFATIGLVRRDYDQYYRGFSNATLWPAFHYRTDLIQYDRHEFEGYGRVNVWLAQQLVP CEEEEHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH LLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFPAAEVLVNVPPHRMLVEAMCS HHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHEECCCCHHHHHHHHHH YDLLGFQTEPDLRAFCDYIDAEAQGSLERGGAPGIRGSGPVTIRAFGRVLQAHAYPIGIY HHHCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHCCCEECCC PDEIASLAQAGANGRAVRTLATSLHGRQLVMSVDRLDYSKGLVERFRAFEKLLEHEASYR HHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRVSFLQIAPSTRADLRAYQDIRLQLEGESGRINGRYAELDWAPILYIHRQYERPLLAAL CCCEEEEECCCCHHHHHHCEEEEEEEECCCCCCCCEEEECCCCEEEEEHHHHCCHHHHHH YRLARVGFVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFAGAARELTGALIVNPMDIDS HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHCCHHHHHCCEEEECCCCHHH MAEALSQALSMPVAERRARYTEMIAQLRENNVSVWRDNFLRDLQRAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEERG CCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCCEEECCCCEEEEECCC PVTFATIGLVRRDYDQYYRGFSNATLWPAFHYRTDLIQYDRHEFEGYGRVNVWLAQQLVP CEEEEHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH LLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFPAAEVLVNVPPHRMLVEAMCS HHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHEECCCCHHHHHHHHHH YDLLGFQTEPDLRAFCDYIDAEAQGSLERGGAPGIRGSGPVTIRAFGRVLQAHAYPIGIY HHHCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHCCCEECCC PDEIASLAQAGANGRAVRTLATSLHGRQLVMSVDRLDYSKGLVERFRAFEKLLEHEASYR HHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRVSFLQIAPSTRADLRAYQDIRLQLEGESGRINGRYAELDWAPILYIHRQYERPLLAAL CCCEEEEECCCCHHHHHHCEEEEEEEECCCCCCCCEEEECCCCEEEEEHHHHCCHHHHHH YRLARVGFVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFAGAARELTGALIVNPMDIDS HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHCCHHHHHCCEEEECCCCHHH MAEALSQALSMPVAERRARYTEMIAQLRENNVSVWRDNFLRDLQRAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA