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The map label for this gene is dadA [H]

Identifier: 238026554

GI number: 238026554

Start: 976899

End: 978185

Strand: Reverse

Name: dadA [H]

Synonym: bglu_1g08980

Alternate gene names: 238026554

Gene position: 978185-976899 (Counterclockwise)

Preceding gene: 238026557

Following gene: 238026547

Centisome position: 25.04

GC content: 69.23

Gene sequence:

>1287_bases
ATGCGAGTCGTGATTCTGGGAAGCGGTGTGGTGGGCGTGACGAGCGCCTATTATCTGGCGCGCGCCGGCCATGAGGTGAC
GGTGATCGAGCGCGAGGCAGGCCCCGCGCTGGAAACCAGCTTCGCGAACGCCGGCCAGATCTCGCCCGGCTACGCGGCGC
CGTGGGCCGCCCCCGGGGTGCCGCTGAAGGCCGTCAAGTGGATGTTCGAGAAGCATGCGCCGCTCGCGATCCGGCTCGAC
GGCTCGCGCTTCCAGTTGCAATGGATGTGGCAGATGCTGCGCAACTGCACGTCCGAACGCTATGCGGTCAACAAGGGCCG
CATGGTACGGTTGGCCGAATACAGCCGCGACTGCCTGCAGGCGCTGCGCGCGGACACCCAGATCGAATACGAAGGCCGCA
CCGGCGGCACGCTGCAACTGTTCCGCACCCAGGCGCAGTTCGACGGCGCGGCGAAGGACATGGCCGTGCTGCGCGAGGCC
AAGGTGCCGTTCGAACTGCTGAACGCGCAGGAACTCGCGCGCGCCGAGCCGGCGCTGGCCGCCGTCTCGCACAAGCTCAC
GGGCGGCCTGCGCCTGCCCGGCGACGAAACCGGCGACTGCCAGCTGTTTACCACGCGGCTCGCCGGGATGGCCGCGGAAC
TCGGCGTGCAGTTCCGCTACAACACGCCGGTGGATGCGCTGGCCGTGGCGGGCGGCCGGATCGCCGGCGTCCAGTGCGGC
GGCGAGCTGGTGCGCGGCGACGCCTACGTGGTCGCGCTCGGCTCGTATTCCACGCGCCTGCTGTCGAACCTCGTGAAGAT
CCCGGTCTATCCGCTCAAGGGCTACTCGATCACGGCGCCGATCGTCGATGCATCGGCCGCGCCCGTCTCCACGGTGCTCG
ACGAAACCTACAAGATCGCGATCACGCGCTTCGATTCGCGCATCCGCGTGGGCGGAATGGCCGAGATCGCCGGCTTCGAC
AAGCGCCTCAACCCGGCGCGCCGCGAGACGCTCGAAATGTGCGTCAACGACCTGTTCCCGGGCGGCGGCGATACCTCGAA
GGCGACGTTCTGGACCGGCCTGCGCCCGATGACGCCGGACGGCACGCCGATCGTGGGCCGCACGCCGATTCCGAACCTCT
ATCTCAACACCGGCCACGGCACGCTCGGCTGGACCATGTCGTGCGGCTCGGGCCAGTTGCTGGCCGACCTGATGTCGGGC
AGGAAGCCGGCCATCCAGGCCGACGACCTCTCGGTGCACCGTTATCTCGGCGAGACGGCGGGCACCCCGCGCCCCGCCTA
CGCGTAA

Upstream 100 bases:

>100_bases
TTCGACAATACCATAGCGCAAAAAACTAGGCCGGTTCGAGCGAGCAAGAGTTGACAAGTGCTTTCTCCGCGCCCCCGGCT
TTTTCCATTTCGGAGCAGCT

Downstream 100 bases:

>100_bases
GCACGGCGCCTCCGCCGGCGCGCGCCAAACGACGAAGGGCACCCTCGCGGGTGCCCTTTTCACCTGTGCCTCAGGGCACG
GGCCAATGCCTGGCGCGGCG

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRVVILGSGVVGVTSAYYLARAGHEVTVIEREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GSRFQLQWMWQMLRNCTSERYAVNKGRMVRLAEYSRDCLQALRADTQIEYEGRTGGTLQLFRTQAQFDGAAKDMAVLREA
KVPFELLNAQELARAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAGMAAELGVQFRYNTPVDALAVAGGRIAGVQCG
GELVRGDAYVVALGSYSTRLLSNLVKIPVYPLKGYSITAPIVDASAAPVSTVLDETYKIAITRFDSRIRVGGMAEIAGFD
KRLNPARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPIPNLYLNTGHGTLGWTMSCGSGQLLADLMSG
RKPAIQADDLSVHRYLGETAGTPRPAYA

Sequences:

>Translated_428_residues
MRVVILGSGVVGVTSAYYLARAGHEVTVIEREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GSRFQLQWMWQMLRNCTSERYAVNKGRMVRLAEYSRDCLQALRADTQIEYEGRTGGTLQLFRTQAQFDGAAKDMAVLREA
KVPFELLNAQELARAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAGMAAELGVQFRYNTPVDALAVAGGRIAGVQCG
GELVRGDAYVVALGSYSTRLLSNLVKIPVYPLKGYSITAPIVDASAAPVSTVLDETYKIAITRFDSRIRVGGMAEIAGFD
KRLNPARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPIPNLYLNTGHGTLGWTMSCGSGQLLADLMSG
RKPAIQADDLSVHRYLGETAGTPRPAYA
>Mature_428_residues
MRVVILGSGVVGVTSAYYLARAGHEVTVIEREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GSRFQLQWMWQMLRNCTSERYAVNKGRMVRLAEYSRDCLQALRADTQIEYEGRTGGTLQLFRTQAQFDGAAKDMAVLREA
KVPFELLNAQELARAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAGMAAELGVQFRYNTPVDALAVAGGRIAGVQCG
GELVRGDAYVVALGSYSTRLLSNLVKIPVYPLKGYSITAPIVDASAAPVSTVLDETYKIAITRFDSRIRVGGMAEIAGFD
KRLNPARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPIPNLYLNTGHGTLGWTMSCGSGQLLADLMSG
RKPAIQADDLSVHRYLGETAGTPRPAYA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=415, Percent_Identity=72.289156626506, Blast_Score=635, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46057; Mature: 46057

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVTSAYYLARAGHEVTVIEREAGPALETSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGSRFQLQWMWQMLRNCTSERYAVNKGRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCCCCEECCCCCEEEHHHHHHHHHH
ALRADTQIEYEGRTGGTLQLFRTQAQFDGAAKDMAVLREAKVPFELLNAQELARAEPALA
HHHCCCEEEECCCCCCEEEEEEEHHHCCCCHHHHHHHHHCCCCHHHHCHHHHHHCCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAGMAAELGVQFRYNTPVDALAVAGGRIAGVQCG
HHHHHHCCCEECCCCCCCCCEEEHHHHHHHHHHHCEEEEECCCHHHHHHCCCEEEEEECC
GELVRGDAYVVALGSYSTRLLSNLVKIPVYPLKGYSITAPIVDASAAPVSTVLDETYKIA
CEEEECCEEEEEECCHHHHHHHHHHHCCCEECCCCEEECCEECCCCCCHHHHHCCCEEEE
ITRFDSRIRVGGMAEIAGFDKRLNPARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPD
EEEECCEEEECCCHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GTPIVGRTPIPNLYLNTGHGTLGWTMSCGSGQLLADLMSGRKPAIQADDLSVHRYLGETA
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
GTPRPAYA
CCCCCCCC
>Mature Secondary Structure
MRVVILGSGVVGVTSAYYLARAGHEVTVIEREAGPALETSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGSRFQLQWMWQMLRNCTSERYAVNKGRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCCCCEECCCCCEEEHHHHHHHHHH
ALRADTQIEYEGRTGGTLQLFRTQAQFDGAAKDMAVLREAKVPFELLNAQELARAEPALA
HHHCCCEEEECCCCCCEEEEEEEHHHCCCCHHHHHHHHHCCCCHHHHCHHHHHHCCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAGMAAELGVQFRYNTPVDALAVAGGRIAGVQCG
HHHHHHCCCEECCCCCCCCCEEEHHHHHHHHHHHCEEEEECCCHHHHHHCCCEEEEEECC
GELVRGDAYVVALGSYSTRLLSNLVKIPVYPLKGYSITAPIVDASAAPVSTVLDETYKIA
CEEEECCEEEEEECCHHHHHHHHHHHCCCEECCCCEEECCEECCCCCCHHHHHCCCEEEE
ITRFDSRIRVGGMAEIAGFDKRLNPARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPD
EEEECCEEEECCCHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GTPIVGRTPIPNLYLNTGHGTLGWTMSCGSGQLLADLMSGRKPAIQADDLSVHRYLGETA
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
GTPRPAYA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA