| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is etfA [H]
Identifier: 238026552
GI number: 238026552
Start: 973959
End: 974894
Strand: Direct
Name: etfA [H]
Synonym: bglu_1g08960
Alternate gene names: 238026552
Gene position: 973959-974894 (Clockwise)
Preceding gene: 238026551
Following gene: 238026553
Centisome position: 24.93
GC content: 68.7
Gene sequence:
>936_bases ATGACGATCCTGATCATTGCCGAACACGACAACGCCTCGATCAAGGCGGCGACGCTGAACACCGTGGCCGCCGCGCAGAA GATCGGCGGCGACATCCATGTGCTGGTGGCAGGGCACGAGGCGCAGGGCGCGGCCGACGCGGCGGCGAAGATCGCCGGCG TGGCGAAGGTGCTGCTGGCCGATGCGCCGCAACTGGCCGCCGGTCTTGCGGAAAACGTCGAGGCCACCGTGCTGAACATC GCCAAGGACTATACGCACATCCTCGCGCCGGCCACCGCCTACGGCAAGAACGTCGCGCCGCGCATCGCCGCCAAGCTCGA CGTCGCGCAGATCTCCGACATCACGGCGGTCGACAGCGCCGATACGTTCGAGCGCCCGATCTACGCCGGCAACGCGATCG CGACCGTGCAGTCGAGCGATCCGATCAAGGTGATCACGGTGCGCGCGACCGGCTTCGATCCGGTGGCGGCCGAAGGCGGC AGCGCGGCGGTCGAGAAGATCGAGGCGGCCGCCGACAGCGGCAAGTCGCAGTTCGTGAGCCGCGAGGTCACGAAGCTCGA CCGCCCGGAATTGACGAGCGCGGCCATCATCGTGTCGGGCGGCCGCGGCCTCGGCAGCGGCGAGAACTACACGAAGGTGC TGGAGCCGCTCGCCGACAAGCTGCAGGCCGCGCTGGGCGCCTCGCGCGCGGCGGTGGACGCCGGCTACGTGCCGAACGAC TTCCAGGTCGGCCAGACCGGCAAGATCGTGGCGCCGCAGCTCTACGTCGCGGTCGGCATCTCGGGTGCGATCCAGCATCT GGCCGGCATGAAGGACTCGAAAGTGATCGTCGCCATCAACAAGGACGAGGAGGCGCCGATCTTCAGCGTGGCCGACTACG GCATCGTCGGCGACCTGTTCACGGTCGTGCCGGAACTGGTGGCGGCGCTCGGCTGA
Upstream 100 bases:
>100_bases GCCGCCCAAGCGTGCCGCGGGTGTGAAGGTGGCCGACGTGAAGACGCTGGTCGAGAAGCTGAAGACCGAAGCGAAAGTGC TGTAAAGGGGAGACGAGAAG
Downstream 100 bases:
>100_bases GCCGGGGCGCGGCCAACCCGCGTATCGATTGCCGGTGCGGCTGACCGCACGGACCAAGGGGCGCGGCGAGCGCCCCTTTT TTTACCCATAGGCAGACAGA
Product: Electron transfer flavoprotein subunit alpha
Products: NA
Alternate protein names: Alpha-ETF; Electron transfer flavoprotein large subunit; ETFLS [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTILIIAEHDNASIKAATLNTVAAAQKIGGDIHVLVAGHEAQGAADAAAKIAGVAKVLLADAPQLAAGLAENVEATVLNI AKDYTHILAPATAYGKNVAPRIAAKLDVAQISDITAVDSADTFERPIYAGNAIATVQSSDPIKVITVRATGFDPVAAEGG SAAVEKIEAAADSGKSQFVSREVTKLDRPELTSAAIIVSGGRGLGSGENYTKVLEPLADKLQAALGASRAAVDAGYVPND FQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGIVGDLFTVVPELVAALG
Sequences:
>Translated_311_residues MTILIIAEHDNASIKAATLNTVAAAQKIGGDIHVLVAGHEAQGAADAAAKIAGVAKVLLADAPQLAAGLAENVEATVLNI AKDYTHILAPATAYGKNVAPRIAAKLDVAQISDITAVDSADTFERPIYAGNAIATVQSSDPIKVITVRATGFDPVAAEGG SAAVEKIEAAADSGKSQFVSREVTKLDRPELTSAAIIVSGGRGLGSGENYTKVLEPLADKLQAALGASRAAVDAGYVPND FQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGIVGDLFTVVPELVAALG >Mature_310_residues TILIIAEHDNASIKAATLNTVAAAQKIGGDIHVLVAGHEAQGAADAAAKIAGVAKVLLADAPQLAAGLAENVEATVLNIA KDYTHILAPATAYGKNVAPRIAAKLDVAQISDITAVDSADTFERPIYAGNAIATVQSSDPIKVITVRATGFDPVAAEGGS AAVEKIEAAADSGKSQFVSREVTKLDRPELTSAAIIVSGGRGLGSGENYTKVLEPLADKLQAALGASRAAVDAGYVPNDF QVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGIVGDLFTVVPELVAALG
Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]
COG id: COG2025
COG function: function code C; Electron transfer flavoprotein, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ETF alpha-subunit/fixB family [H]
Homologues:
Organism=Homo sapiens, GI4503607, Length=311, Percent_Identity=58.8424437299035, Blast_Score=353, Evalue=1e-97, Organism=Homo sapiens, GI189181759, Length=275, Percent_Identity=60, Blast_Score=315, Evalue=3e-86, Organism=Escherichia coli, GI1787990, Length=294, Percent_Identity=32.312925170068, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1786226, Length=232, Percent_Identity=36.6379310344828, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI87082157, Length=226, Percent_Identity=32.3008849557522, Blast_Score=92, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17506929, Length=312, Percent_Identity=56.0897435897436, Blast_Score=332, Evalue=2e-91, Organism=Saccharomyces cerevisiae, GI6325261, Length=319, Percent_Identity=43.5736677115987, Blast_Score=254, Evalue=1e-68, Organism=Drosophila melanogaster, GI17136898, Length=312, Percent_Identity=61.5384615384615, Blast_Score=357, Evalue=8e-99, Organism=Drosophila melanogaster, GI24652801, Length=312, Percent_Identity=61.5384615384615, Blast_Score=357, Evalue=8e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001308 - InterPro: IPR014730 - InterPro: IPR014731 - InterPro: IPR018206 - InterPro: IPR014729 [H]
Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]
EC number: NA
Molecular weight: Translated: 31595; Mature: 31464
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00059 ADH_ZINC ; PS00696 ETF_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILIIAEHDNASIKAATLNTVAAAQKIGGDIHVLVAGHEAQGAADAAAKIAGVAKVLLA CEEEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH DAPQLAAGLAENVEATVLNIAKDYTHILAPATAYGKNVAPRIAAKLDVAQISDITAVDSA CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCHHHHCCCEECCCC DTFERPIYAGNAIATVQSSDPIKVITVRATGFDPVAAEGGSAAVEKIEAAADSGKSQFVS CHHCCCEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH REVTKLDRPELTSAAIIVSGGRGLGSGENYTKVLEPLADKLQAALGASRAAVDAGYVPND HHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC FQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGIVGDLF CEECCCCCEECCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCHHHHHH TVVPELVAALG HHHHHHHHHCC >Mature Secondary Structure TILIIAEHDNASIKAATLNTVAAAQKIGGDIHVLVAGHEAQGAADAAAKIAGVAKVLLA EEEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH DAPQLAAGLAENVEATVLNIAKDYTHILAPATAYGKNVAPRIAAKLDVAQISDITAVDSA CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCHHHHCCCEECCCC DTFERPIYAGNAIATVQSSDPIKVITVRATGFDPVAAEGGSAAVEKIEAAADSGKSQFVS CHHCCCEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH REVTKLDRPELTSAAIIVSGGRGLGSGENYTKVLEPLADKLQAALGASRAAVDAGYVPND HHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC FQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGIVGDLF CEECCCCCEECCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCHHHHHH TVVPELVAALG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]