| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ubiG [H]
Identifier: 238026526
GI number: 238026526
Start: 946929
End: 947627
Strand: Reverse
Name: ubiG [H]
Synonym: bglu_1g08700
Alternate gene names: 238026526
Gene position: 947627-946929 (Counterclockwise)
Preceding gene: 238026527
Following gene: 238026525
Centisome position: 24.26
GC content: 64.66
Gene sequence:
>699_bases ATGACCAACGCCGATCCGCACGAACTACAGAAATTCAGCGATCTCGCCCACAAGTGGTGGGATCCGAACGCCGAGTTCAA GCCGCTGCACGACCTGAACCCGGTCCGTCTCGGCTGGATCGACGCCCATGCGCACCTGCCCGGCAAGCGCGTGCTCGACG TCGGCTGCGGCGGCGGCATCCTGTCGGAGTCGATGGCAAGCCTTGGTGCCCAGGTCAAGGGCATCGACCTGTCGACCGAG GCGCTCGGCGTAGCCGACCTGCACAGCCTGGAAAGCGGCGTGACGGTGGATTACGAGGCGATCTCGGCCGAGGCGATCGC CGCACGCGAGCCGGGCAGCTATGACGTCGTCACCTGCATGGAGATGCTCGAGCATGTGCCATCGCCGGCCAACATCGTGG CCGCCTGCTCGGCGCTCGTGAAACCGGGCGGCTGGGTGTTTTTCTCGACGCTGAACCGCAACCTGAAGTCGTACCTGCTC GCCGTGATCGGTGCCGAGTACGTCGCGCAGTTGCTGCCTAAGGGCACCCACGACTACGCGCGCTTCATTCGCCCGTCCGA GCTTGCCGGCTTCATTCGCGCCACCGACCTGCATATCGCGGAAATACGCGGCATCACCTATCACCCGCTGACGAAGCACT TCGAGCTGTCGAACGACACCGACGTGAATTATCTCGTCGCCTGCCGCCGCCACGCCTGA
Upstream 100 bases:
>100_bases CGGGGCTTTTTCTTTTCGGCGCCGGCCATCCGGTGGCAGCCGATCCCGCCCGCTTATATACTCGGGGCTCGCTCCATCTT CGCGTTTTCCGCTTGCCGAC
Downstream 100 bases:
>100_bases TCCGGATCGCCGCCCGCATGTCCACCTCCCTCGCCCCGCTCTCCGCCGTCGCGGCGCCGCCCCTCGCCGCCTGCGACGCG GTGCTGTTCGACCTCGACGG
Product: bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTNADPHELQKFSDLAHKWWDPNAEFKPLHDLNPVRLGWIDAHAHLPGKRVLDVGCGGGILSESMASLGAQVKGIDLSTE ALGVADLHSLESGVTVDYEAISAEAIAAREPGSYDVVTCMEMLEHVPSPANIVAACSALVKPGGWVFFSTLNRNLKSYLL AVIGAEYVAQLLPKGTHDYARFIRPSELAGFIRATDLHIAEIRGITYHPLTKHFELSNDTDVNYLVACRRHA
Sequences:
>Translated_232_residues MTNADPHELQKFSDLAHKWWDPNAEFKPLHDLNPVRLGWIDAHAHLPGKRVLDVGCGGGILSESMASLGAQVKGIDLSTE ALGVADLHSLESGVTVDYEAISAEAIAAREPGSYDVVTCMEMLEHVPSPANIVAACSALVKPGGWVFFSTLNRNLKSYLL AVIGAEYVAQLLPKGTHDYARFIRPSELAGFIRATDLHIAEIRGITYHPLTKHFELSNDTDVNYLVACRRHA >Mature_231_residues TNADPHELQKFSDLAHKWWDPNAEFKPLHDLNPVRLGWIDAHAHLPGKRVLDVGCGGGILSESMASLGAQVKGIDLSTEA LGVADLHSLESGVTVDYEAISAEAIAAREPGSYDVVTCMEMLEHVPSPANIVAACSALVKPGGWVFFSTLNRNLKSYLLA VIGAEYVAQLLPKGTHDYARFIRPSELAGFIRATDLHIAEIRGITYHPLTKHFELSNDTDVNYLVACRRHA
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=238, Percent_Identity=34.0336134453782, Blast_Score=160, Evalue=8e-40, Organism=Escherichia coli, GI1788564, Length=225, Percent_Identity=57.3333333333333, Blast_Score=266, Evalue=7e-73, Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=32.0512820512821, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324476, Length=281, Percent_Identity=30.2491103202847, Blast_Score=129, Evalue=4e-31, Organism=Drosophila melanogaster, GI281365311, Length=246, Percent_Identity=30.8943089430894, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24585589, Length=267, Percent_Identity=29.9625468164794, Blast_Score=121, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 25307; Mature: 25176
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNADPHELQKFSDLAHKWWDPNAEFKPLHDLNPVRLGWIDAHAHLPGKRVLDVGCGGGI CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCHH LSESMASLGAQVKGIDLSTEALGVADLHSLESGVTVDYEAISAEAIAAREPGSYDVVTCM HHHHHHHHCCEEECCCCCHHHHCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHH EMLEHVPSPANIVAACSALVKPGGWVFFSTLNRNLKSYLLAVIGAEYVAQLLPKGTHDYA HHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELAGFIRATDLHIAEIRGITYHPLTKHFELSNDTDVNYLVACRRHA HHCCHHHHHHHHHHCCEEHHHHCCCEECCCCCEEECCCCCCCCEEEEEECCC >Mature Secondary Structure TNADPHELQKFSDLAHKWWDPNAEFKPLHDLNPVRLGWIDAHAHLPGKRVLDVGCGGGI CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCHH LSESMASLGAQVKGIDLSTEALGVADLHSLESGVTVDYEAISAEAIAAREPGSYDVVTCM HHHHHHHHCCEEECCCCCHHHHCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHH EMLEHVPSPANIVAACSALVKPGGWVFFSTLNRNLKSYLLAVIGAEYVAQLLPKGTHDYA HHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELAGFIRATDLHIAEIRGITYHPLTKHFELSNDTDVNYLVACRRHA HHCCHHHHHHHHHHCCEEHHHHCCCEECCCCCEEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA