| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yvgK [H]
Identifier: 238026517
GI number: 238026517
Start: 935682
End: 936764
Strand: Direct
Name: yvgK [H]
Synonym: bglu_1g08610
Alternate gene names: 238026517
Gene position: 935682-936764 (Clockwise)
Preceding gene: 238026512
Following gene: 238026518
Centisome position: 23.95
GC content: 71.28
Gene sequence:
>1083_bases ATGATTCGAGTCGAATGCGACGCACATCTGATCGTGCGCGACAGCGAAGGGCGCACGGCCAGCCTGTCGGACGTGGTGCC GCTGCTGGATCTGGTCGCGACGACGGGCAGTATCGCTCAGGCCGCCGAGGCCAAGGGCTTGTCCTACCGTCATGCCTGGG GCCTGCTGCGCGCGCTGGAAGCCTGCGTGGGCGGCGCGCTGATCGAGACCGCGCGCGGCAAGGGCACTTCGCTGTCCGAG CTCGGCGTGGCCGTGGTCGGTGCGCAGCGCCTGGTCGGCGAGCGCCTGGGCGGCAACCTGCGGGCCTTGGCCGCCGAGGT CGCGAGCGAACTGAACCGGCGCCTGATCCAGCATCCCGGCGCGCTGCGGATCCACGCCTCGCACGGCTATGCGGTCGCGG CGCTGGTGTCGGCGCTGGTCGACGGGCACGCGCAGGTGGACATCAAGTACCGCGAGAGCGTCGAGGCGGTTATGGCGCTC GCGCGCGGCGAGTGCGATCTGGCCGGCTTTCACCTGCCGCATGGCACGTTCCGCGAGAACTGCGCGCAGATCTACCGGCC GTGGCTCGACGACACGCGCCACGTGCTGATCCACCTGACGCGGCGCAAACAGGGCCTGTTCATCCCGCGCGGCAATCCGA AGGGCGTGGTGGGGCTCGCCGATCTGGCGCGCGACGACGTGCGCTTCGTCAATCGCCAGCCCGGCTCGGGCACGCGGATG CTGCTCGACCTGGCCCTGCGCGAGATCGGCATCGATCCCGAGGCGATCAACGGTTATGCCTCGGCCGAGCTGACGCATTC CGCGATCGCGGCCTTCGTGGCGAGCGGGATGGCGGATCTGGGCTTCGGCGTCGAGCCGGCCGCGCATCACTTCGGGCTGG CGTTCATTCCGGTGGTGGACGAGGACTACTATTTTGCCTGCGACCGCCACCGGCTCGGCGAGGCGCCGCTGGCCGGCGCG CTCACGCTGCTGCGCGGGACGCCGTATCGCGACACCGTCGCGCGGCTCGACGGCTACGATCCGGGCGCCTGCGGCACGCT GCTGTCGGTCGCCGACGGGCTGGCGGGGGCGACCGCGGCCTGA
Upstream 100 bases:
>100_bases GGGGTTTCATATATCCCGGCATCGACGCTGTTGTTTGATCGAGTGCAGAAGACGATAAGCCGTTAGAATCCAGGTCGCAA TAAGAAATGAGGTTGCATAA
Downstream 100 bases:
>100_bases CGCGGCGCGTTTGGCCGACCACGCTGCCGGGCCGCAACCAGATTCGGCTTGCGCGGCCCTGGCCATGCGGCCCAGGAAAT GGCCGGTAACGCGGCGCGGG
Product: molybdate transport repressor domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MIRVECDAHLIVRDSEGRTASLSDVVPLLDLVATTGSIAQAAEAKGLSYRHAWGLLRALEACVGGALIETARGKGTSLSE LGVAVVGAQRLVGERLGGNLRALAAEVASELNRRLIQHPGALRIHASHGYAVAALVSALVDGHAQVDIKYRESVEAVMAL ARGECDLAGFHLPHGTFRENCAQIYRPWLDDTRHVLIHLTRRKQGLFIPRGNPKGVVGLADLARDDVRFVNRQPGSGTRM LLDLALREIGIDPEAINGYASAELTHSAIAAFVASGMADLGFGVEPAAHHFGLAFIPVVDEDYYFACDRHRLGEAPLAGA LTLLRGTPYRDTVARLDGYDPGACGTLLSVADGLAGATAA
Sequences:
>Translated_360_residues MIRVECDAHLIVRDSEGRTASLSDVVPLLDLVATTGSIAQAAEAKGLSYRHAWGLLRALEACVGGALIETARGKGTSLSE LGVAVVGAQRLVGERLGGNLRALAAEVASELNRRLIQHPGALRIHASHGYAVAALVSALVDGHAQVDIKYRESVEAVMAL ARGECDLAGFHLPHGTFRENCAQIYRPWLDDTRHVLIHLTRRKQGLFIPRGNPKGVVGLADLARDDVRFVNRQPGSGTRM LLDLALREIGIDPEAINGYASAELTHSAIAAFVASGMADLGFGVEPAAHHFGLAFIPVVDEDYYFACDRHRLGEAPLAGA LTLLRGTPYRDTVARLDGYDPGACGTLLSVADGLAGATAA >Mature_360_residues MIRVECDAHLIVRDSEGRTASLSDVVPLLDLVATTGSIAQAAEAKGLSYRHAWGLLRALEACVGGALIETARGKGTSLSE LGVAVVGAQRLVGERLGGNLRALAAEVASELNRRLIQHPGALRIHASHGYAVAALVSALVDGHAQVDIKYRESVEAVMAL ARGECDLAGFHLPHGTFRENCAQIYRPWLDDTRHVLIHLTRRKQGLFIPRGNPKGVVGLADLARDDVRFVNRQPGSGTRM LLDLALREIGIDPEAINGYASAELTHSAIAAFVASGMADLGFGVEPAAHHFGLAFIPVVDEDYYFACDRHRLGEAPLAGA LTLLRGTPYRDTVARLDGYDPGACGTLLSVADGLAGATAA
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38126; Mature: 38126
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVECDAHLIVRDSEGRTASLSDVVPLLDLVATTGSIAQAAEAKGLSYRHAWGLLRALE CEEEEECCEEEEECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH ACVGGALIETARGKGTSLSELGVAVVGAQRLVGERLGGNLRALAAEVASELNRRLIQHPG HHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC ALRIHASHGYAVAALVSALVDGHAQVDIKYRESVEAVMALARGECDLAGFHLPHGTFREN CEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCEECEECCCCHHHHH CAQIYRPWLDDTRHVLIHLTRRKQGLFIPRGNPKGVVGLADLARDDVRFVNRQPGSGTRM HHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCHHH LLDLALREIGIDPEAINGYASAELTHSAIAAFVASGMADLGFGVEPAAHHFGLAFIPVVD HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCCEEEEEEEC EDYYFACDRHRLGEAPLAGALTLLRGTPYRDTVARLDGYDPGACGTLLSVADGLAGATAA CCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIRVECDAHLIVRDSEGRTASLSDVVPLLDLVATTGSIAQAAEAKGLSYRHAWGLLRALE CEEEEECCEEEEECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH ACVGGALIETARGKGTSLSELGVAVVGAQRLVGERLGGNLRALAAEVASELNRRLIQHPG HHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC ALRIHASHGYAVAALVSALVDGHAQVDIKYRESVEAVMALARGECDLAGFHLPHGTFREN CEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCEECEECCCCHHHHH CAQIYRPWLDDTRHVLIHLTRRKQGLFIPRGNPKGVVGLADLARDDVRFVNRQPGSGTRM HHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCHHH LLDLALREIGIDPEAINGYASAELTHSAIAAFVASGMADLGFGVEPAAHHFGLAFIPVVD HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHCCEEEEEEEC EDYYFACDRHRLGEAPLAGALTLLRGTPYRDTVARLDGYDPGACGTLLSVADGLAGATAA CCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]