| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026509
Identifier: 238026509
GI number: 238026509
Start: 923914
End: 924729
Strand: Direct
Name: 238026509
Synonym: bglu_1g08530
Alternate gene names: NA
Gene position: 923914-924729 (Clockwise)
Preceding gene: 238026508
Following gene: 238026510
Centisome position: 23.65
GC content: 72.43
Gene sequence:
>816_bases TTGAGCACGCGCAGCAGAATTGCCCGCTTCATCGGACAGGCGCTGCCGGGCGCCGCGCTGGCCGCGTTCGCGATCTGCGG CGTCCATGCGCCGGCCGCCGAAGCCGGCGTGACGGCCGGCGCCGCCCCCGCTGGGGCCACCGTGCCGCCGGCGCCGCCCC GGCCCGCGGCCGATCGCCCGGCCGCCGCCGATATGGCGCCGCTGCCCGATTCCGTGCCGCCCGTGGCCGGCACGCGTCCC GACGTCACCACGCTGACGCCCGGCGAGGGCGCCGGCCCGGGCGGGACCTCGCCGCTTGCCGCCGACGACGCGCAGGGCAG CGTGGCCGAGCTGATGGGGATGCTGCGTGATCACCAGCTGACGGAGCTGCGCACGACCTACAACGGCAGCTACGGCGCGA GCCTGTTGTTCTATCCACGAGAAATGACCTATTACGTCGCGCTGTTCCAGGACAAGCACTTCTGGCGCGTGGTCAAGTCT CAGGAGCGCCCGCGCGCGGAGATGATCTACCAGAACTTCGTCGACCAGACGGTCCAGCTGTCCGACATCGAGCTGCGACG TACCGAGCTGGCCGCCCAGAAGCAGTTTCTCGAACGCGTGATCGGCCTGTCCGAGGATCGGGCGAAGCGCCTGCGCGCCG ATCTCGAGATCGCCCGCGAGCAGCAGGCGCAGATCGAGGCGCGGCAGCGGGCGGCGCAGGATCAGGCCCGGGCGCTCGCG GTCGAGCAGCGCGCTGCGGCGGCCCAACTGCACGAACTGCAGCGTCGCGTGCAGCGGCTGCAGCAAGAGAACGGGCTCGG GCCGGACGCGCCGTGA
Upstream 100 bases:
>100_bases TCCACTGCGGCAATCTGCCGGCCGACCCGCATTCGCGGGCGGCCGGCACGCGATTTGGGCGATAATCGCGCGTTCTCTCT CGTCATTTAGGAGCTTCAGC
Downstream 100 bases:
>100_bases CGCAGCGGTGAGGCTGACGATCCGGTTTCACACGCGCCACGAGCCACCTGTTTCGTAAGCATTACGAAAGCTTTACCGCG CCCCTCATCACTTCCCCGCA
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Exported Lipoprotein; Molecular Chaperone; Exported Protein
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSTRSRIARFIGQALPGAALAAFAICGVHAPAAEAGVTAGAAPAGATVPPAPPRPAADRPAAADMAPLPDSVPPVAGTRP DVTTLTPGEGAGPGGTSPLAADDAQGSVAELMGMLRDHQLTELRTTYNGSYGASLLFYPREMTYYVALFQDKHFWRVVKS QERPRAEMIYQNFVDQTVQLSDIELRRTELAAQKQFLERVIGLSEDRAKRLRADLEIAREQQAQIEARQRAAQDQARALA VEQRAAAAQLHELQRRVQRLQQENGLGPDAP
Sequences:
>Translated_271_residues MSTRSRIARFIGQALPGAALAAFAICGVHAPAAEAGVTAGAAPAGATVPPAPPRPAADRPAAADMAPLPDSVPPVAGTRP DVTTLTPGEGAGPGGTSPLAADDAQGSVAELMGMLRDHQLTELRTTYNGSYGASLLFYPREMTYYVALFQDKHFWRVVKS QERPRAEMIYQNFVDQTVQLSDIELRRTELAAQKQFLERVIGLSEDRAKRLRADLEIAREQQAQIEARQRAAQDQARALA VEQRAAAAQLHELQRRVQRLQQENGLGPDAP >Mature_270_residues STRSRIARFIGQALPGAALAAFAICGVHAPAAEAGVTAGAAPAGATVPPAPPRPAADRPAAADMAPLPDSVPPVAGTRPD VTTLTPGEGAGPGGTSPLAADDAQGSVAELMGMLRDHQLTELRTTYNGSYGASLLFYPREMTYYVALFQDKHFWRVVKSQ ERPRAEMIYQNFVDQTVQLSDIELRRTELAAQKQFLERVIGLSEDRAKRLRADLEIAREQQAQIEARQRAAQDQARALAV EQRAAAAQLHELQRRVQRLQQENGLGPDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29194; Mature: 29063
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRSRIARFIGQALPGAALAAFAICGVHAPAAEAGVTAGAAPAGATVPPAPPRPAADRP CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AAADMAPLPDSVPPVAGTRPDVTTLTPGEGAGPGGTSPLAADDAQGSVAELMGMLRDHQL CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TELRTTYNGSYGASLLFYPREMTYYVALFQDKHFWRVVKSQERPRAEMIYQNFVDQTVQL HHHHHHHCCCCCCEEEEECHHHEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH SDIELRRTELAAQKQFLERVIGLSEDRAKRLRADLEIAREQQAQIEARQRAAQDQARALA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEQRAAAAQLHELQRRVQRLQQENGLGPDAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure STRSRIARFIGQALPGAALAAFAICGVHAPAAEAGVTAGAAPAGATVPPAPPRPAADRP CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AAADMAPLPDSVPPVAGTRPDVTTLTPGEGAGPGGTSPLAADDAQGSVAELMGMLRDHQL CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TELRTTYNGSYGASLLFYPREMTYYVALFQDKHFWRVVKSQERPRAEMIYQNFVDQTVQL HHHHHHHCCCCCCEEEEECHHHEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH SDIELRRTELAAQKQFLERVIGLSEDRAKRLRADLEIAREQQAQIEARQRAAQDQARALA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEQRAAAAQLHELQRRVQRLQQENGLGPDAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA