| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is metE [H]
Identifier: 238026499
GI number: 238026499
Start: 908241
End: 910517
Strand: Direct
Name: metE [H]
Synonym: bglu_1g08430
Alternate gene names: 238026499
Gene position: 908241-910517 (Clockwise)
Preceding gene: 238026493
Following gene: 238026501
Centisome position: 23.25
GC content: 73.03
Gene sequence:
>2277_bases ATGAGCCGGGCGCATGTATTGGGATTCCCTCGTATCGGCGCGCAGCGTGAGGCGGCGCACGCGCTGGAGCACTATTGGCG AGATGGCCGGTCGGCGCACGGCCTGCGCGTGCTCGCCGAAACCGGACGCGCGGTGCGTGCGGAGAACTGGCGGATGCAGC GCGCCGCGGGCCTCGATCTGGTGACGGCCGGCGACTTCGCATGGGGCGATCACGTGCTGACCACGCTCGCGCATCTGGGC GGGCTGCCGCGCCGCTTCGGCGCCGATCCCGAGCGGCTGACGCTCGACGCGCTGTTCGACGCGCTGCGCGGCACCGGCTC GCGGCCGGCGATGGAAACCGCGGCCTGGTTCGATACGAACTATCGTTACGTGGTGCCGGAATTCGGTCCCGATACCGCGT TCGGGCCCGGTGTCGGCTGGCTGTTCGACGAGGTGGCGGAGGCGCAGGCGCTCGGCCATTCGGTCAAGGTCGCGCTGGTG GGGCCGCTCACGCTGCTCTGGCTCGGCCGTTCGCGCGGCGGGCTCGGCAACCGGCTGGCGCTGCTGCCCGCGCTGCTGGC CGCGTACCGCGCGCTGCTCGCGCGGCTGGCCGCGCAGCACGTCGAATGGGTGCAGATCGACGAGCCGGTGCTTGCGCTCG AACTGCCCGAGGCGTGGCTCGATGCGCTGCAGCCGGCCTGCGCGGCGCTGGCCGACGGCGCGCCGAAGCTGCTGCTGACC ACCGGCTTCGGCGACGTCTCGGCGCTGGCCGCGCGCCTGAAGGCGCTGCCGGTGGCGGGCCTGCACCTCGACCTGGCGCG CGCCGACGCGCAGCTCGACGCCTTCCTCGCCGGCTGGCCGGCCGACAAGGTGCTCTCGTGCGGCGTCGTCGACGGCCGCA ACGTCTGGCGCAACGATCTCGACCGTTCGCATGCGCGCCTCGCGGCGGCCCGCGCCGCGCTCGGCGACCGGCTGTGGGTG GCCACCAGCTGCTCGCTGCTGCACGTGCCGGTCGATTTGCGCGCCGAGACGAAGCTCGACGAGGAGCTGAAATCATGGCT CGCGTTTGCGGCCCAGAAGGCGCGCGAGGTGGCGCTGCTGCGCGACGCGCTGGTGCGGGGCCGTGAGGCGGTGGCCGGCG CGCTCGACGAGGCGCGCCGTGCCGCCGAGGCGCGCGCCGCGTCGCCGCGCGTGCGCAACGTGCTGGTCGAGCGGCGCGTC GCGGCGCTCGGCGAAGCCGACCTGCGCCGCGGCTCGCCCTATGCGGTGCGCGCGGCCCGCCAGCAGGCGCGCTTCGCGCT GCCGCCGCTGCCGACCACCACGATCGGCTCGTTTCCATGCACGGACGGCCTGCGCGACACGCGCGAGGCGTTTCGGCGCG GCGCGCTCGATCACCTCGGCTATCTGGAGGCGATGCGCGAGCAGATCCGCTACGCGATCGACAAGCAGCTCCATTACGGG CTCGACGTCCTGGTGCACGGCGAGGCGGAGCGCGACGACATGGTGGAGTTCTTCGCCGGGCAGCTGTGGGGCTGCGCGGT GACGGAGGCGGGCTGGGTGCAGCGCGGCCCTGCCGCGTGCGTGAAGCCGCCGATCGTCTATGGCGACGTCTACCTGCCCG AGCCGATGACGGTCGGCTGGACGCAGTACGCGCAGAGCTTGACCGACAAGCCGGTGAAGGGCCTGCTGACCGGGCCCATG ACGCTGCTGCAGCGTTCGTTCGTGCGTGACGACCTGCCGCGCGAGACGGTCGCGCTGCAGCTTGCGCTGGCGCTGCGCCA GGAAACGATCGAGCTGGAGAAGGCCGGCATCGGCATGATCCAGATCGACGAGCCGGCGCTGCGCGACGGCCTGCCGCTCG CGGCTGCCGGGCGCGCGGCGTTCCTCGACCTGGCGGTGCGCGCGTTCCGGGTGGCCTCGTCGGGGGTCGCGGACGACACG CAGATCCACACCCATATCTGCGATGCCTCGCTCGACGACGTGCTGCCGGCGATCGCCGCGCTCGATGCCGACGTGATCTC GATCGAGACCACGCATTCGAACGGCACGCTGCTCGACACCGGCTATCCGAATGCGATCGGCCCGGGCGTCTACGACATCC ATTCGCCGCGCGTGCCCGACGAGGACGAGATCGCGGCACGGCTCGCGGCCGCGCTCGAACGGGTGCCGGCCACGCGCCTG TGGGTCAATCCGGACTGCGGGCTGCGCGAACGCGAATGGGCGCAGGTGGACGCGGCGCTGCACGCGCTGGTCGGCGCGGC ACGACGCCTGCGCGAGCAGGTGGCCGCGTTCGGTTGA
Upstream 100 bases:
>100_bases ATTTTTCATGTTCAACTCAAGAAAATTTCGTTTGAGTAATGATAAGCGAGATCCGATACTGCAGCCCATATCGACTGCAG CCCATATCTGGAGGACACCA
Downstream 100 bases:
>100_bases GCACGCGGCGTCCCGCGTGCCGCCGCCATGAAAAAACGGCCGGCGCCGCTCAAGCGGCGCCGGCCGTCTGGTCGACGCGG CCCGGCCGGGTCGGCTGGGC
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme [H]
Number of amino acids: Translated: 758; Mature: 757
Protein sequence:
>758_residues MSRAHVLGFPRIGAQREAAHALEHYWRDGRSAHGLRVLAETGRAVRAENWRMQRAAGLDLVTAGDFAWGDHVLTTLAHLG GLPRRFGADPERLTLDALFDALRGTGSRPAMETAAWFDTNYRYVVPEFGPDTAFGPGVGWLFDEVAEAQALGHSVKVALV GPLTLLWLGRSRGGLGNRLALLPALLAAYRALLARLAAQHVEWVQIDEPVLALELPEAWLDALQPACAALADGAPKLLLT TGFGDVSALAARLKALPVAGLHLDLARADAQLDAFLAGWPADKVLSCGVVDGRNVWRNDLDRSHARLAAARAALGDRLWV ATSCSLLHVPVDLRAETKLDEELKSWLAFAAQKAREVALLRDALVRGREAVAGALDEARRAAEARAASPRVRNVLVERRV AALGEADLRRGSPYAVRAARQQARFALPPLPTTTIGSFPCTDGLRDTREAFRRGALDHLGYLEAMREQIRYAIDKQLHYG LDVLVHGEAERDDMVEFFAGQLWGCAVTEAGWVQRGPAACVKPPIVYGDVYLPEPMTVGWTQYAQSLTDKPVKGLLTGPM TLLQRSFVRDDLPRETVALQLALALRQETIELEKAGIGMIQIDEPALRDGLPLAAAGRAAFLDLAVRAFRVASSGVADDT QIHTHICDASLDDVLPAIAALDADVISIETTHSNGTLLDTGYPNAIGPGVYDIHSPRVPDEDEIAARLAAALERVPATRL WVNPDCGLREREWAQVDAALHALVGAARRLREQVAAFG
Sequences:
>Translated_758_residues MSRAHVLGFPRIGAQREAAHALEHYWRDGRSAHGLRVLAETGRAVRAENWRMQRAAGLDLVTAGDFAWGDHVLTTLAHLG GLPRRFGADPERLTLDALFDALRGTGSRPAMETAAWFDTNYRYVVPEFGPDTAFGPGVGWLFDEVAEAQALGHSVKVALV GPLTLLWLGRSRGGLGNRLALLPALLAAYRALLARLAAQHVEWVQIDEPVLALELPEAWLDALQPACAALADGAPKLLLT TGFGDVSALAARLKALPVAGLHLDLARADAQLDAFLAGWPADKVLSCGVVDGRNVWRNDLDRSHARLAAARAALGDRLWV ATSCSLLHVPVDLRAETKLDEELKSWLAFAAQKAREVALLRDALVRGREAVAGALDEARRAAEARAASPRVRNVLVERRV AALGEADLRRGSPYAVRAARQQARFALPPLPTTTIGSFPCTDGLRDTREAFRRGALDHLGYLEAMREQIRYAIDKQLHYG LDVLVHGEAERDDMVEFFAGQLWGCAVTEAGWVQRGPAACVKPPIVYGDVYLPEPMTVGWTQYAQSLTDKPVKGLLTGPM TLLQRSFVRDDLPRETVALQLALALRQETIELEKAGIGMIQIDEPALRDGLPLAAAGRAAFLDLAVRAFRVASSGVADDT QIHTHICDASLDDVLPAIAALDADVISIETTHSNGTLLDTGYPNAIGPGVYDIHSPRVPDEDEIAARLAAALERVPATRL WVNPDCGLREREWAQVDAALHALVGAARRLREQVAAFG >Mature_757_residues SRAHVLGFPRIGAQREAAHALEHYWRDGRSAHGLRVLAETGRAVRAENWRMQRAAGLDLVTAGDFAWGDHVLTTLAHLGG LPRRFGADPERLTLDALFDALRGTGSRPAMETAAWFDTNYRYVVPEFGPDTAFGPGVGWLFDEVAEAQALGHSVKVALVG PLTLLWLGRSRGGLGNRLALLPALLAAYRALLARLAAQHVEWVQIDEPVLALELPEAWLDALQPACAALADGAPKLLLTT GFGDVSALAARLKALPVAGLHLDLARADAQLDAFLAGWPADKVLSCGVVDGRNVWRNDLDRSHARLAAARAALGDRLWVA TSCSLLHVPVDLRAETKLDEELKSWLAFAAQKAREVALLRDALVRGREAVAGALDEARRAAEARAASPRVRNVLVERRVA ALGEADLRRGSPYAVRAARQQARFALPPLPTTTIGSFPCTDGLRDTREAFRRGALDHLGYLEAMREQIRYAIDKQLHYGL DVLVHGEAERDDMVEFFAGQLWGCAVTEAGWVQRGPAACVKPPIVYGDVYLPEPMTVGWTQYAQSLTDKPVKGLLTGPMT LLQRSFVRDDLPRETVALQLALALRQETIELEKAGIGMIQIDEPALRDGLPLAAAGRAAFLDLAVRAFRVASSGVADDTQ IHTHICDASLDDVLPAIAALDADVISIETTHSNGTLLDTGYPNAIGPGVYDIHSPRVPDEDEIAARLAAALERVPATRLW VNPDCGLREREWAQVDAALHALVGAARRLREQVAAFG
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [H]
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367304, Length=756, Percent_Identity=52.1164021164021, Blast_Score=716, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=772, Percent_Identity=43.0051813471503, Blast_Score=587, Evalue=1e-168,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 [H]
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2 [H]
EC number: =2.1.1.14 [H]
Molecular weight: Translated: 82045; Mature: 81913
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAHVLGFPRIGAQREAAHALEHYWRDGRSAHGLRVLAETGRAVRAENWRMQRAAGLDL CCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEECCCCHHHHHCCCEE VTAGDFAWGDHVLTTLAHLGGLPRRFGADPERLTLDALFDALRGTGSRPAMETAAWFDTN EECCCCCCHHHHHHHHHHHCCCCHHHCCCHHHEEHHHHHHHHHCCCCCCCHHHHHHCCCC YRYVVPEFGPDTAFGPGVGWLFDEVAEAQALGHSVKVALVGPLTLLWLGRSRGGLGNRLA CEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEHEEECCCCCCCCHHHH LLPALLAAYRALLARLAAQHVEWVQIDEPVLALELPEAWLDALQPACAALADGAPKLLLT HHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE TGFGDVSALAARLKALPVAGLHLDLARADAQLDAFLAGWPADKVLSCGVVDGRNVWRNDL ECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHH DRSHARLAAARAALGDRLWVATSCSLLHVPVDLRAETKLDEELKSWLAFAAQKAREVALL HHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDALVRGREAVAGALDEARRAAEARAASPRVRNVLVERRVAALGEADLRRGSPYAVRAAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHH QQARFALPPLPTTTIGSFPCTDGLRDTREAFRRGALDHLGYLEAMREQIRYAIDKQLHYG HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC LDVLVHGEAERDDMVEFFAGQLWGCAVTEAGWVQRGPAACVKPPIVYGDVYLPEPMTVGW CEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCCH TQYAQSLTDKPVKGLLTGPMTLLQRSFVRDDLPRETVALQLALALRQETIELEKAGIGMI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE QIDEPALRDGLPLAAAGRAAFLDLAVRAFRVASSGVADDTQIHTHICDASLDDVLPAIAA EECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHH LDADVISIETTHSNGTLLDTGYPNAIGPGVYDIHSPRVPDEDEIAARLAAALERVPATRL CCCCEEEEEEECCCCCEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEE WVNPDCGLREREWAQVDAALHALVGAARRLREQVAAFG EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRAHVLGFPRIGAQREAAHALEHYWRDGRSAHGLRVLAETGRAVRAENWRMQRAAGLDL CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEECCCCHHHHHCCCEE VTAGDFAWGDHVLTTLAHLGGLPRRFGADPERLTLDALFDALRGTGSRPAMETAAWFDTN EECCCCCCHHHHHHHHHHHCCCCHHHCCCHHHEEHHHHHHHHHCCCCCCCHHHHHHCCCC YRYVVPEFGPDTAFGPGVGWLFDEVAEAQALGHSVKVALVGPLTLLWLGRSRGGLGNRLA CEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEHEEECCCCCCCCHHHH LLPALLAAYRALLARLAAQHVEWVQIDEPVLALELPEAWLDALQPACAALADGAPKLLLT HHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE TGFGDVSALAARLKALPVAGLHLDLARADAQLDAFLAGWPADKVLSCGVVDGRNVWRNDL ECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHH DRSHARLAAARAALGDRLWVATSCSLLHVPVDLRAETKLDEELKSWLAFAAQKAREVALL HHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDALVRGREAVAGALDEARRAAEARAASPRVRNVLVERRVAALGEADLRRGSPYAVRAAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHH QQARFALPPLPTTTIGSFPCTDGLRDTREAFRRGALDHLGYLEAMREQIRYAIDKQLHYG HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC LDVLVHGEAERDDMVEFFAGQLWGCAVTEAGWVQRGPAACVKPPIVYGDVYLPEPMTVGW CEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCCH TQYAQSLTDKPVKGLLTGPMTLLQRSFVRDDLPRETVALQLALALRQETIELEKAGIGMI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE QIDEPALRDGLPLAAAGRAAFLDLAVRAFRVASSGVADDTQIHTHICDASLDDVLPAIAA EECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHH LDADVISIETTHSNGTLLDTGYPNAIGPGVYDIHSPRVPDEDEIAARLAAALERVPATRL CCCCEEEEEEECCCCCEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEE WVNPDCGLREREWAQVDAALHALVGAARRLREQVAAFG EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA