| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026435
Identifier: 238026435
GI number: 238026435
Start: 832805
End: 833392
Strand: Direct
Name: 238026435
Synonym: bglu_1g07700
Alternate gene names: NA
Gene position: 832805-833392 (Clockwise)
Preceding gene: 238026434
Following gene: 238026436
Centisome position: 21.32
GC content: 64.97
Gene sequence:
>588_bases ATGACGCTTTCCCGGACGAGCCGCCGGCGCCGCCTCGCGCTTGCCGCGCTCGCGGTCCTCGGTGGATCGGTGTCGCTGAC CGCCTGCGGCGCGACGCCTACGTTTCCGTTCATCCCGAACCACTATACGTTCTCGAAATCGGACGTGCAGCGGGCCGTGG CGCGCAAGTTTCCATACCAGCACACCGTCTCACAGGTGTTCGAGGTCGCGCTCGCGAATCCCGCCGTGAGCCTGCTGCCC GAACAGAACCGCGTCGCCGTGCAGCTCGACGCGCGCTTCGCGAGCCCGTTCCTGAGCGAGCCCGTGAGCGGCCTGTTTAC CGTCTCGGCACAGCTTGCTTACGATCCTGCGAGCCTCTCGGTGGTGCTGCGTGCGCCGGCCGTCGACAGCGTTCACCTCG ACGGCGACGCGCAGGCCTACACCGCCCAGGTCGGCCAGGCCGCCGGGCTGCTCGCCACGCAACTGCTGACCAATTATCCG ATCTACACCTTCAAGCCCGAGCAACTGCAATTCGCCGGCGTGAACTACGAACCCGGTACAATTACGATTCTTACAAACGG TATACGCGTCGAGATCGTCGAGAAGTGA
Upstream 100 bases:
>100_bases ACGACGAGATGTGCGGCGGCTCGCGCGACGAGGCGCTCGCGTGGCTGACCCGGCTCGAGGCCGCGACACGCCCCGGCTCG CCAGCAGCAGGAGAATCCGC
Downstream 100 bases:
>100_bases CGGGGTCGGCGCGCGGCCGGGCGGGCCGCGTGCCGGGTCACAGTACCGGCGGCGGCCCTGTTTTCCGCAACTCTGATGAA CGGGCAACCGATGGACTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTLSRTSRRRRLALAALAVLGGSVSLTACGATPTFPFIPNHYTFSKSDVQRAVARKFPYQHTVSQVFEVALANPAVSLLP EQNRVAVQLDARFASPFLSEPVSGLFTVSAQLAYDPASLSVVLRAPAVDSVHLDGDAQAYTAQVGQAAGLLATQLLTNYP IYTFKPEQLQFAGVNYEPGTITILTNGIRVEIVEK
Sequences:
>Translated_195_residues MTLSRTSRRRRLALAALAVLGGSVSLTACGATPTFPFIPNHYTFSKSDVQRAVARKFPYQHTVSQVFEVALANPAVSLLP EQNRVAVQLDARFASPFLSEPVSGLFTVSAQLAYDPASLSVVLRAPAVDSVHLDGDAQAYTAQVGQAAGLLATQLLTNYP IYTFKPEQLQFAGVNYEPGTITILTNGIRVEIVEK >Mature_194_residues TLSRTSRRRRLALAALAVLGGSVSLTACGATPTFPFIPNHYTFSKSDVQRAVARKFPYQHTVSQVFEVALANPAVSLLPE QNRVAVQLDARFASPFLSEPVSGLFTVSAQLAYDPASLSVVLRAPAVDSVHLDGDAQAYTAQVGQAAGLLATQLLTNYPI YTFKPEQLQFAGVNYEPGTITILTNGIRVEIVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20980; Mature: 20849
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSRTSRRRRLALAALAVLGGSVSLTACGATPTFPFIPNHYTFSKSDVQRAVARKFPYQ CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHCCCH HTVSQVFEVALANPAVSLLPEQNRVAVQLDARFASPFLSEPVSGLFTVSAQLAYDPASLS HHHHHHHHHHHCCCHHEECCCCCCEEEEEECCCCCHHHHCCCCCEEEEEEEEEECCCCEE VVLRAPAVDSVHLDGDAQAYTAQVGQAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEPGT EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCE ITILTNGIRVEIVEK EEEEECCEEEEEEEC >Mature Secondary Structure TLSRTSRRRRLALAALAVLGGSVSLTACGATPTFPFIPNHYTFSKSDVQRAVARKFPYQ CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHCCCH HTVSQVFEVALANPAVSLLPEQNRVAVQLDARFASPFLSEPVSGLFTVSAQLAYDPASLS HHHHHHHHHHHCCCHHEECCCCCCEEEEEECCCCCHHHHCCCCCEEEEEEEEEECCCCEE VVLRAPAVDSVHLDGDAQAYTAQVGQAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEPGT EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCE ITILTNGIRVEIVEK EEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA