Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026412

Identifier: 238026412

GI number: 238026412

Start: 810487

End: 811749

Strand: Reverse

Name: 238026412

Synonym: bglu_1g07470

Alternate gene names: NA

Gene position: 811749-810487 (Counterclockwise)

Preceding gene: 238026417

Following gene: 238026411

Centisome position: 20.78

GC content: 70.55

Gene sequence:

>1263_bases
ATGCTGAAGCTTTCGCGCATCGCCAACCCCGATGTCGCTCGCGCCGCCGCGAACCTGGTTTGGCTCGGCCTCGAGCGCCT
CACGCAGATCGGCGTGGCGATCGTGATCAGCGGCCTGCTCGCGCGCGCGCTCGGCCCCGAGACGTTCGGCAAGTGGCAGT
ACGCGAACACGCTGCTGCTGGTGCTGGCGCCGCTGACCTGGGTGTGCGGCGCCGAGATCCTGGTGCCGACCATCGTCCAG
CGTCCGGCCGAGCAGCTCGGCGCCGTGCTCGGCAGCGCGTTCGCGCTGCGCATCTCGGTGTCGGCCGCCGCGCTCGCGCT
GACCTGGGCAGGCATCGCCGCGCACTGGGTCGATCCGCTCGTCGGCGCGATGCTGGCCGGACTCGCGGTGACGATGGTGC
TGCGCGAGCCGTTCGTGGGCGTGGTCAACGCCTGGCTGCAGAGCATGACCTACAGCAAGCCGCAGCTGATCGCCAGCATG
GCGGCCGCGCTCGGCAAGGCCGTGCTGGTCTGGCTGCTGGTGCGCGCCTCCGCGGCGCCCGCCAGCTACGGCTGGCTGTG
GGCGCTCGAGGCCGGCGCCATCGCGCTCGCGCTGATGCTCTACTACCGGCACCGCCACGGCGGCCGGCTCGGCTGGCGCG
TCGAGGCGCCCCTGTTCCGCCATTTCGCCTCGGCGGGCACGGTGTTCTGGTTCGGACTCGTCTGCATGTACCTGTTCCTG
AAGCTCGACCGGCTGATGCTCGAGCGCCAGGTGTCGTTCGCCGAACTGGGCCGCTACGCGGCGGCGCAGCAACTGAACGA
GAACTGGATCACGCTCGCGCTGCTGCTCGCCCAGACCATCGCGCCCGCCTTCGTCTACCGCGTGGGCGAGACGGCGCGGC
TGCGCCGCAACGTCTGGCGGCTAATGGCGATGACCAGCGCGCTGATGGTGGCCGGCGCGGCGGTGCTCGACCTGCTCGCG
CCCTTCATCATCGGCCGCGTGTTCGGGCCGGGCTTCGCGCAATCGGCATCGATCTTCCGCTGGGCCGTCTGGCTCTCGGT
GCCGGCCGGGATCGAGGCGATCGGCAACCTGGTGGTGCTCAAATACCAGGCGAAATTCGTGCTGCTCGCGAAATGGCTGC
TCGCGCTGGCCGTGGCGGCTCTCGCCAACACCTTCGCGATCCCGGCGCTCGGCCTGTACGGCGCGCTGGTCGGCCTCGCC
GCCGGCTACCTCGCGGCCGCCTCGGTCAACTTCTACTACATCCGCCAGAGTCTGCACTCATGA

Upstream 100 bases:

>100_bases
GCCGCCCATTCTAATGCGTGGATGTTTCAGCGCAGCAAATTAGAAATTGGGCGGCACCGGCCGGACGCGGCCACGTACCC
ATTTTCTTCCGATTTTTTTC

Downstream 100 bases:

>100_bases
CGCCCTCCCCCGCCTGCGCCGGCACGCTCGACGACGTCGCGGTGCTGATCCCCGCCTACAACGGCCACCACGACCTCGAA
CGCACGCTCGACTCGCTCGA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Lipopolysaccharide Biosynthesis Protein; O-Antigen Export Protein; Oligosaccharide Translocase; PST Family Polysaccharide Export Protein; O Antigen Flippase

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MLKLSRIANPDVARAAANLVWLGLERLTQIGVAIVISGLLARALGPETFGKWQYANTLLLVLAPLTWVCGAEILVPTIVQ
RPAEQLGAVLGSAFALRISVSAAALALTWAGIAAHWVDPLVGAMLAGLAVTMVLREPFVGVVNAWLQSMTYSKPQLIASM
AAALGKAVLVWLLVRASAAPASYGWLWALEAGAIALALMLYYRHRHGGRLGWRVEAPLFRHFASAGTVFWFGLVCMYLFL
KLDRLMLERQVSFAELGRYAAAQQLNENWITLALLLAQTIAPAFVYRVGETARLRRNVWRLMAMTSALMVAGAAVLDLLA
PFIIGRVFGPGFAQSASIFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWLLALAVAALANTFAIPALGLYGALVGLA
AGYLAAASVNFYYIRQSLHS

Sequences:

>Translated_420_residues
MLKLSRIANPDVARAAANLVWLGLERLTQIGVAIVISGLLARALGPETFGKWQYANTLLLVLAPLTWVCGAEILVPTIVQ
RPAEQLGAVLGSAFALRISVSAAALALTWAGIAAHWVDPLVGAMLAGLAVTMVLREPFVGVVNAWLQSMTYSKPQLIASM
AAALGKAVLVWLLVRASAAPASYGWLWALEAGAIALALMLYYRHRHGGRLGWRVEAPLFRHFASAGTVFWFGLVCMYLFL
KLDRLMLERQVSFAELGRYAAAQQLNENWITLALLLAQTIAPAFVYRVGETARLRRNVWRLMAMTSALMVAGAAVLDLLA
PFIIGRVFGPGFAQSASIFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWLLALAVAALANTFAIPALGLYGALVGLA
AGYLAAASVNFYYIRQSLHS
>Mature_420_residues
MLKLSRIANPDVARAAANLVWLGLERLTQIGVAIVISGLLARALGPETFGKWQYANTLLLVLAPLTWVCGAEILVPTIVQ
RPAEQLGAVLGSAFALRISVSAAALALTWAGIAAHWVDPLVGAMLAGLAVTMVLREPFVGVVNAWLQSMTYSKPQLIASM
AAALGKAVLVWLLVRASAAPASYGWLWALEAGAIALALMLYYRHRHGGRLGWRVEAPLFRHFASAGTVFWFGLVCMYLFL
KLDRLMLERQVSFAELGRYAAAQQLNENWITLALLLAQTIAPAFVYRVGETARLRRNVWRLMAMTSALMVAGAAVLDLLA
PFIIGRVFGPGFAQSASIFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLAKWLLALAVAALANTFAIPALGLYGALVGLA
AGYLAAASVNFYYIRQSLHS

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45281; Mature: 45281

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLSRIANPDVARAAANLVWLGLERLTQIGVAIVISGLLARALGPETFGKWQYANTLLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHH
VLAPLTWVCGAEILVPTIVQRPAEQLGAVLGSAFALRISVSAAALALTWAGIAAHWVDPL
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHH
VGAMLAGLAVTMVLREPFVGVVNAWLQSMTYSKPQLIASMAAALGKAVLVWLLVRASAAP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASYGWLWALEAGAIALALMLYYRHRHGGRLGWRVEAPLFRHFASAGTVFWFGLVCMYLFL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHH
KLDRLMLERQVSFAELGRYAAAQQLNENWITLALLLAQTIAPAFVYRVGETARLRRNVWR
HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LMAMTSALMVAGAAVLDLLAPFIIGRVFGPGFAQSASIFRWAVWLSVPAGIEAIGNLVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCEEEE
KYQAKFVLLAKWLLALAVAALANTFAIPALGLYGALVGLAAGYLAAASVNFYYIRQSLHS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKLSRIANPDVARAAANLVWLGLERLTQIGVAIVISGLLARALGPETFGKWQYANTLLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHH
VLAPLTWVCGAEILVPTIVQRPAEQLGAVLGSAFALRISVSAAALALTWAGIAAHWVDPL
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHH
VGAMLAGLAVTMVLREPFVGVVNAWLQSMTYSKPQLIASMAAALGKAVLVWLLVRASAAP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASYGWLWALEAGAIALALMLYYRHRHGGRLGWRVEAPLFRHFASAGTVFWFGLVCMYLFL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHH
KLDRLMLERQVSFAELGRYAAAQQLNENWITLALLLAQTIAPAFVYRVGETARLRRNVWR
HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LMAMTSALMVAGAAVLDLLAPFIIGRVFGPGFAQSASIFRWAVWLSVPAGIEAIGNLVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCEEEE
KYQAKFVLLAKWLLALAVAALANTFAIPALGLYGALVGLAAGYLAAASVNFYYIRQSLHS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA