Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026401

Identifier: 238026401

GI number: 238026401

Start: 798344

End: 799579

Strand: Direct

Name: 238026401

Synonym: bglu_1g07360

Alternate gene names: NA

Gene position: 798344-799579 (Clockwise)

Preceding gene: 339905959

Following gene: 238026402

Centisome position: 20.44

GC content: 66.67

Gene sequence:

>1236_bases
ATGCTGCAATCCCTGTTTTCCCTGTTCCGCAAACGGCCCGAACGCCGCCGTCGCACCGACGGCAAGCTCGGTGTCGTGAT
CGAGCTGGCATCGTTCGACAAGGGCGGCCTCGAGAAAGTCGTCCTCGACTCGGCGATTGCCTTCGATCGCGCGCGCTTCG
ACGTGACGATCGTCACGCCCGGCACGGTCGGCCATCTCGGTACGGTGGCGCGTGACGCGGGCCTGCGCGTGGTCGGGCTG
CCCGCCGGCAACCCGCTGCCGGCCTACGAGCGCCTGCTCGCCGAGGACGGCATCGACATCGCGATGTCGCACTTCTCGGA
CACCGGCTATCCGCTGTTCGAGAAGTTCGGGATACCGAACGTGACCTACATCCACAACGTCTACGCGTTCTTCTCGGACG
CACAGGCGAGCGCGTTTGCGCGCAACGACCGCTACGTGGACCGCTACGTGTCGGTGTCGCGCAACGCCACGCGCTTCGCC
GTGCACCGGCTGGGCGTGTCCGAGGCCAAGGTCGACACCATTCCGAACGGCTTGATCCTGGCCGAGCACGAGGCGCGCGA
GCGCCAGCCGCAGTCGCTCACGCGTGCGGAACTGGGCCTGGCCGACACCGACTACGTGTTCGCCAACGTGGCGTCCTACA
ACCTGCACAAGGGCCACTACCTGATGGCCGACGCGATGCTCCACCTGCTGGAGCGGCGCCGCGACGTGAAGATTCTCTGC
GTCGGCAACGTCGTCTATGCGCCGCACATCGACGCGCTGCGGGCCCATCTCGATGCTCATGGCCTGAGCGAGCACATCCT
GATGCCCGGCTACGTCGCGGACGTGGCGGCGGTGCACCGGATCGCCGATGCGTTCCTGCTGCCGTCGTTCATCGAGGGCT
GGAGCATCGCCATGAACGAGGCGATGTTCTATCGCAAGCCGATGGTGCTCAGCGATACCGGCGCGTCGGCCGAGGTGATC
GAGCAGGACGACATCGGCATCCTCGTGCCGAACGAGTACGGCGACACCATCGACCTGAACTCGAAGCTGCTCGACGAACT
CGCCTATGCGCCGCGCCGCTACCGCGTCGCACCGGTGCTGGCCGATGCGATGGATCGCATGGCCAGCGATCGCCAGGGGT
GGCGCGAACGCGGTGCGCGCGGCCGCGACAAGATCTATGCGCATTACGACTTCGCCGGGATCGTCTCGCGTTACGAGGCG
GTGATCGAGGACGTCGTGCGTGCGCACGCGCGGTGA

Upstream 100 bases:

>100_bases
ACCCTGTTGGACTCGATCGGCGTTCGCGACGGCACGCGCGACTTGCGCGCCGGCGTGTTCGACGTCCGCTGACTCGTTTC
CCGCATTTCCGGATATTCCC

Downstream 100 bases:

>100_bases
CGGAGGCGTCGAATGCTCGGCAGGCTCAAATCGCTGTATCGCTTCCTACGCTGGCGCTTCAAGCCGGCGGTGTGCTTCTA
TCTTGGCAACCACCTGTTCA

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; LPS Biosynthesis Related Glycosyltransferase; Capsular Polysaccharide Biosynthesis ProteinCps4H; Glycosyltransferase Group 1 Family Protein

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MLQSLFSLFRKRPERRRRTDGKLGVVIELASFDKGGLEKVVLDSAIAFDRARFDVTIVTPGTVGHLGTVARDAGLRVVGL
PAGNPLPAYERLLAEDGIDIAMSHFSDTGYPLFEKFGIPNVTYIHNVYAFFSDAQASAFARNDRYVDRYVSVSRNATRFA
VHRLGVSEAKVDTIPNGLILAEHEARERQPQSLTRAELGLADTDYVFANVASYNLHKGHYLMADAMLHLLERRRDVKILC
VGNVVYAPHIDALRAHLDAHGLSEHILMPGYVADVAAVHRIADAFLLPSFIEGWSIAMNEAMFYRKPMVLSDTGASAEVI
EQDDIGILVPNEYGDTIDLNSKLLDELAYAPRRYRVAPVLADAMDRMASDRQGWRERGARGRDKIYAHYDFAGIVSRYEA
VIEDVVRAHAR

Sequences:

>Translated_411_residues
MLQSLFSLFRKRPERRRRTDGKLGVVIELASFDKGGLEKVVLDSAIAFDRARFDVTIVTPGTVGHLGTVARDAGLRVVGL
PAGNPLPAYERLLAEDGIDIAMSHFSDTGYPLFEKFGIPNVTYIHNVYAFFSDAQASAFARNDRYVDRYVSVSRNATRFA
VHRLGVSEAKVDTIPNGLILAEHEARERQPQSLTRAELGLADTDYVFANVASYNLHKGHYLMADAMLHLLERRRDVKILC
VGNVVYAPHIDALRAHLDAHGLSEHILMPGYVADVAAVHRIADAFLLPSFIEGWSIAMNEAMFYRKPMVLSDTGASAEVI
EQDDIGILVPNEYGDTIDLNSKLLDELAYAPRRYRVAPVLADAMDRMASDRQGWRERGARGRDKIYAHYDFAGIVSRYEA
VIEDVVRAHAR
>Mature_411_residues
MLQSLFSLFRKRPERRRRTDGKLGVVIELASFDKGGLEKVVLDSAIAFDRARFDVTIVTPGTVGHLGTVARDAGLRVVGL
PAGNPLPAYERLLAEDGIDIAMSHFSDTGYPLFEKFGIPNVTYIHNVYAFFSDAQASAFARNDRYVDRYVSVSRNATRFA
VHRLGVSEAKVDTIPNGLILAEHEARERQPQSLTRAELGLADTDYVFANVASYNLHKGHYLMADAMLHLLERRRDVKILC
VGNVVYAPHIDALRAHLDAHGLSEHILMPGYVADVAAVHRIADAFLLPSFIEGWSIAMNEAMFYRKPMVLSDTGASAEVI
EQDDIGILVPNEYGDTIDLNSKLLDELAYAPRRYRVAPVLADAMDRMASDRQGWRERGARGRDKIYAHYDFAGIVSRYEA
VIEDVVRAHAR

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45815; Mature: 45815

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSLFSLFRKRPERRRRTDGKLGVVIELASFDKGGLEKVVLDSAIAFDRARFDVTIVTP
CHHHHHHHHHHCHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECC
GTVGHLGTVARDAGLRVVGLPAGNPLPAYERLLAEDGIDIAMSHFSDTGYPLFEKFGIPN
CCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCCCC
VTYIHNVYAFFSDAQASAFARNDRYVDRYVSVSRNATRFAVHRLGVSEAKVDTIPNGLIL
HHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCEEE
AEHEARERQPQSLTRAELGLADTDYVFANVASYNLHKGHYLMADAMLHLLERRRDVKILC
ECCHHHHCCCHHHHHHHCCCCCCCHHEEEHEECCCCCCCHHHHHHHHHHHHCCCCEEEEE
VGNVVYAPHIDALRAHLDAHGLSEHILMPGYVADVAAVHRIADAFLLPSFIEGWSIAMNE
ECCEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AMFYRKPMVLSDTGASAEVIEQDDIGILVPNEYGDTIDLNSKLLDELAYAPRRYRVAPVL
HHHHCCCEEEECCCCCCEEEECCCCEEECCCCCCCEEECCHHHHHHHHCCCCCEEEHHHH
ADAMDRMASDRQGWRERGARGRDKIYAHYDFAGIVSRYEAVIEDVVRAHAR
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQSLFSLFRKRPERRRRTDGKLGVVIELASFDKGGLEKVVLDSAIAFDRARFDVTIVTP
CHHHHHHHHHHCHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECC
GTVGHLGTVARDAGLRVVGLPAGNPLPAYERLLAEDGIDIAMSHFSDTGYPLFEKFGIPN
CCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCCCC
VTYIHNVYAFFSDAQASAFARNDRYVDRYVSVSRNATRFAVHRLGVSEAKVDTIPNGLIL
HHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCEEE
AEHEARERQPQSLTRAELGLADTDYVFANVASYNLHKGHYLMADAMLHLLERRRDVKILC
ECCHHHHCCCHHHHHHHCCCCCCCHHEEEHEECCCCCCCHHHHHHHHHHHHCCCCEEEEE
VGNVVYAPHIDALRAHLDAHGLSEHILMPGYVADVAAVHRIADAFLLPSFIEGWSIAMNE
ECCEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AMFYRKPMVLSDTGASAEVIEQDDIGILVPNEYGDTIDLNSKLLDELAYAPRRYRVAPVL
HHHHCCCEEEECCCCCCEEEECCCCEEECCCCCCCEEECCHHHHHHHHCCCCCEEEHHHH
ADAMDRMASDRQGWRERGARGRDKIYAHYDFAGIVSRYEAVIEDVVRAHAR
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA