Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is osmY [C]

Identifier: 238026373

GI number: 238026373

Start: 763767

End: 764135

Strand: Direct

Name: osmY [C]

Synonym: bglu_1g07070

Alternate gene names: 238026373

Gene position: 763767-764135 (Clockwise)

Preceding gene: 238026369

Following gene: 238026375

Centisome position: 19.55

GC content: 67.75

Gene sequence:

>369_bases
ATGAAGTCGATCGTGTGGAAGTCTCTGGGCAGCGCGCTGGTTGCGGCGCTCGTGTGCGGCAACGTCTATGCGCAGGCGAG
CGACGCCGCCTCGGGCGCCGAGGCGCCGGCCGCCAGCAAGAGCACGCAGAAGGCGGCCGCCAAGGCGGCCCACAAGTCCA
ACCGCAAGCTCGGTTACGCGGTGCGCAAGGCCATCACGAAGGCGGGCGGCATCGACGTGTCGAACATCACCGTGCGCTCG
AAGGGCGGCGCGATTTCGCTGCAGGGCACGGTGCCGGACCAGTCGCAGATCGACAAGGCCGGCGAAGTGGCCAAGGGCGT
GGCGGGTGTCACCTCGGTCGACAACAAGCTGACCGTTCAGCAGCAGTAA

Upstream 100 bases:

>100_bases
GTGAAAACGTCGGCCGACGGCATCCGTCGCCGGCCGTTCATCTGGGGGTAATTCGGCCGCCGGTCTCGTGCGGCCGTTTC
CGGAATCACAAGGAGAAACT

Downstream 100 bases:

>100_bases
GACTGCAAACGCCGGCGGCGTCGGCCGCCTCGCGTGAAACCTGCGCCGCCTCGAGCGGCGCATTCTTTTTGAGGCGGCAG
GCGGGGTCGTGCCGGCCGCC

Product: transport-associated protein

Products: NA

Alternate protein names: Transport-Associated Domain-Containing Protein

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKSIVWKSLGSALVAALVCGNVYAQASDAASGAEAPAASKSTQKAAAKAAHKSNRKLGYAVRKAITKAGGIDVSNITVRS
KGGAISLQGTVPDQSQIDKAGEVAKGVAGVTSVDNKLTVQQQ

Sequences:

>Translated_122_residues
MKSIVWKSLGSALVAALVCGNVYAQASDAASGAEAPAASKSTQKAAAKAAHKSNRKLGYAVRKAITKAGGIDVSNITVRS
KGGAISLQGTVPDQSQIDKAGEVAKGVAGVTSVDNKLTVQQQ
>Mature_122_residues
MKSIVWKSLGSALVAALVCGNVYAQASDAASGAEAPAASKSTQKAAAKAAHKSNRKLGYAVRKAITKAGGIDVSNITVRS
KGGAISLQGTVPDQSQIDKAGEVAKGVAGVTSVDNKLTVQQQ

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12251; Mature: 12251

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIVWKSLGSALVAALVCGNVYAQASDAASGAEAPAASKSTQKAAAKAAHKSNRKLGYA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
VRKAITKAGGIDVSNITVRSKGGAISLQGTVPDQSQIDKAGEVAKGVAGVTSVDNKLTVQ
HHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
QQ
CC
>Mature Secondary Structure
MKSIVWKSLGSALVAALVCGNVYAQASDAASGAEAPAASKSTQKAAAKAAHKSNRKLGYA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
VRKAITKAGGIDVSNITVRSKGGAISLQGTVPDQSQIDKAGEVAKGVAGVTSVDNKLTVQ
HHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
QQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA