| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is tolQ [H]
Identifier: 238026340
GI number: 238026340
Start: 730762
End: 731439
Strand: Reverse
Name: tolQ [H]
Synonym: bglu_1g06740
Alternate gene names: 238026340
Gene position: 731439-730762 (Counterclockwise)
Preceding gene: 238026341
Following gene: 238026339
Centisome position: 18.72
GC content: 65.19
Gene sequence:
>678_bases ATGAACTCTGCACAAGACCTGTCGATCGTTTCTCTCGTCCTCAATGCGAGCGTGCTTGCCCAGGCCGTGATGGGGCTGCT TCTGCTGCTGTCGCTGATGTCCTGGACGTTCATCTTCCGCAAATGGTTCGCGCTGCGCCGCGCGCGCAGGCAGACCGAGC GCTTCGAGCGCGACTTCTGGTCCGGCGGCGACCTGCAGGCCCTGTATCAGAGCGCGGCCAACAATCGCCATACGATCGGC TCGCTCGAGCGCATCTTCGAATCGGGCATGCGCGAGTTTCTGAAGGCGAAGGAAAAGCGCATCTCGGACCCGTCGCTGAT CCTCGACGGCGCGCGCCGCGCGATGCGCGCCGCGTTCCAGCGCGAGATGGACATGCTCGAGGCCAACCTCGCGTTCCTCG CCTCGGTCGGCTCGGTCAGCCCGTACATCGGCCTGTTCGGCACCGTGTGGGGGATCATGAACTCGTTCCGCGGCCTCGCC AACGTGCAGCAGGCCACGCTCGCGAACGTCGCGCCCGGCATCGCCGAAGCGCTGGTGGCCACCGCGATCGGCCTGTTCGC CGCGATCCCGGCGGTGGTTGCCTACAACCGCTACGCACACGAGATCGATCGTCTCGCGAGCCGCTTCGAGACCTTCGTCG AGGAGTTCTCGAACATCCTGCAGCGTCAGGCGCAATAA
Upstream 100 bases:
>100_bases GCCGGCTGCAAAGCCGGCCGGCCACCGGACGCCGGACCCGTACCGCGCCACGGCGGCAAGGCGCGACGCGACGGCCAAGA AGCACGTTAACCACACACCT
Downstream 100 bases:
>100_bases GGAGCACGCGATGGCCGGCACTCCCCTCCGTTCCAGCATGCGCGGCGGCCGCTCGCGCCGCGCGATGGCCGACATCAACG TCGTGCCTTACATCGACGTA
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MNSAQDLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFALRRARRQTERFERDFWSGGDLQALYQSAANNRHTIG SLERIFESGMREFLKAKEKRISDPSLILDGARRAMRAAFQREMDMLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLA NVQQATLANVAPGIAEALVATAIGLFAAIPAVVAYNRYAHEIDRLASRFETFVEEFSNILQRQAQ
Sequences:
>Translated_225_residues MNSAQDLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFALRRARRQTERFERDFWSGGDLQALYQSAANNRHTIG SLERIFESGMREFLKAKEKRISDPSLILDGARRAMRAAFQREMDMLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLA NVQQATLANVAPGIAEALVATAIGLFAAIPAVVAYNRYAHEIDRLASRFETFVEEFSNILQRQAQ >Mature_225_residues MNSAQDLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFALRRARRQTERFERDFWSGGDLQALYQSAANNRHTIG SLERIFESGMREFLKAKEKRISDPSLILDGARRAMRAAFQREMDMLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLA NVQQATLANVAPGIAEALVATAIGLFAAIPAVVAYNRYAHEIDRLASRFETFVEEFSNILQRQAQ
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=219, Percent_Identity=49.3150684931507, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI1789381, Length=203, Percent_Identity=39.4088669950739, Blast_Score=119, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25113; Mature: 25113
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSAQDLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFALRRARRQTERFERDFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGGDLQALYQSAANNRHTIGSLERIFESGMREFLKAKEKRISDPSLILDGARRAMRAAFQ CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH REMDMLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH TAIGLFAAIPAVVAYNRYAHEIDRLASRFETFVEEFSNILQRQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSAQDLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFALRRARRQTERFERDFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGGDLQALYQSAANNRHTIGSLERIFESGMREFLKAKEKRISDPSLILDGARRAMRAAFQ CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH REMDMLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH TAIGLFAAIPAVVAYNRYAHEIDRLASRFETFVEEFSNILQRQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]