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The map label for this gene is omlA [H]

Identifier: 238026211

GI number: 238026211

Start: 571163

End: 572065

Strand: Direct

Name: omlA [H]

Synonym: bglu_1g05420

Alternate gene names: 238026211

Gene position: 571163-572065 (Clockwise)

Preceding gene: 238026209

Following gene: 238026212

Centisome position: 14.62

GC content: 73.2

Gene sequence:

>903_bases
ATGCGGAGTGCCATCACTGCTGCCGTCGCTGTCGCCGTCGTCACGCTGGCAGGCTGTTCGTCATATGACAGCGTCACGCA
ACGAATCGCGCAGAGCATTACGCCGTACCGCATCACGGTCGTCCAGGGCAATTTCGTTTCCCAGGAAAAAGCTGCACAGC
TGCAAGTCGGCATGACGCGCGACCAGGTTCGCACGCTGCTCGGCACGCCGCTGCTCACCGATATGTTCCACGCCGATCGC
TGGGACTATCTGTTCTATTTCAAGCGCGGCTCGACCTCGGTGGTCCAGCAGCGCGATCTCGTGCTGCATTTCCAGAACGA
TCGCCTCGCGAGCTGGAGCGGCGCGGAAAATCTGCCGACCGAGCTCGACCTGCTCGCCGACATCGACGGCGACCGCCGCG
GCAAGCGCGCCGCCAAGGCGGCAGCGAAAGCGGCCGCCGAGCAGGCCGCTGCGGCGTCGGCCGCTTCCGCGGCAGCCGCC
GCCGCGCCGGCCCCGGCTGCTGCCGCGCCGGCCCCGAGCCTCCCGCCCGACATGGCGGCCAGCCCGGCTGCGGGCGCCTC
GAGCGCCTCGAGCGCGGCGGCGCCGGCGGCGGGCGGCCAGAGCGCCGCCAACACCGAGGCCGCGCGCGCGGCGAACCGCG
CGACCGCGCAGGTTCCGGGCCAGGGCGCCCAGCATCGCTTCAAGCCGTCGGCGCAGAGCGCGCCGTCCGCCCCGACGCCG
GGCGGCATGCCGCCCGGCGCGAGCCCGGCGATCCAGCCGCAGTTCCAGTTCCAGCGTCCGCCGCAGCCGTCGGCGCCGAG
CGACGCGGCGCCGCCCGTCGGCCCGCGGGGCACCGACGTGCTGCCGAATCAGCCGCTGACCGCGCCGCCCGCCGACATCT
CGGCGCCGCCGAACTCGAACTGA

Upstream 100 bases:

>100_bases
CCTGTCAGTCATCAGTGAGCCGAGTCGTGCGGCCTGTCCGACGGTTCGATCCGATGAAGGACAAGTTTCCTGTATCCGTT
CGCAACTTCAGAGGACCCGC

Downstream 100 bases:

>100_bases
CGCGCGGGCAGTAGCCAACGGGCGGCTTCGGCCGCCCGGTTCGTTTTCCGAATCCCGTCCCCTTCTTCGTTCACCTACGC
GAACACGACCATGAAGATTG

Product: outer membrane lipoprotein, SmpA/OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRSAITAAVAVAVVTLAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQVGMTRDQVRTLLGTPLLTDMFHADR
WDYLFYFKRGSTSVVQQRDLVLHFQNDRLASWSGAENLPTELDLLADIDGDRRGKRAAKAAAKAAAEQAAAASAASAAAA
AAPAPAAAAPAPSLPPDMAASPAAGASSASSAAAPAAGGQSAANTEAARAANRATAQVPGQGAQHRFKPSAQSAPSAPTP
GGMPPGASPAIQPQFQFQRPPQPSAPSDAAPPVGPRGTDVLPNQPLTAPPADISAPPNSN

Sequences:

>Translated_300_residues
MRSAITAAVAVAVVTLAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQVGMTRDQVRTLLGTPLLTDMFHADR
WDYLFYFKRGSTSVVQQRDLVLHFQNDRLASWSGAENLPTELDLLADIDGDRRGKRAAKAAAKAAAEQAAAASAASAAAA
AAPAPAAAAPAPSLPPDMAASPAAGASSASSAAAPAAGGQSAANTEAARAANRATAQVPGQGAQHRFKPSAQSAPSAPTP
GGMPPGASPAIQPQFQFQRPPQPSAPSDAAPPVGPRGTDVLPNQPLTAPPADISAPPNSN
>Mature_300_residues
MRSAITAAVAVAVVTLAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQVGMTRDQVRTLLGTPLLTDMFHADR
WDYLFYFKRGSTSVVQQRDLVLHFQNDRLASWSGAENLPTELDLLADIDGDRRGKRAAKAAAKAAAEQAAAASAASAAAA
AAPAPAAAAPAPSLPPDMAASPAAGASSASSAAAPAAGGQSAANTEAARAANRATAQVPGQGAQHRFKPSAQSAPSAPTP
GGMPPGASPAIQPQFQFQRPPQPSAPSDAAPPVGPRGTDVLPNQPLTAPPADISAPPNSN

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=106, Percent_Identity=37.7358490566038, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 30397; Mature: 30397

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAITAAVAVAVVTLAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQVGMTR
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCH
DQVRTLLGTPLLTDMFHADRWDYLFYFKRGSTSVVQQRDLVLHFQNDRLASWSGAENLPT
HHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCC
ELDLLADIDGDRRGKRAAKAAAKAAAEQAAAASAASAAAAAAPAPAAAAPAPSLPPDMAA
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SPAAGASSASSAAAPAAGGQSAANTEAARAANRATAQVPGQGAQHRFKPSAQSAPSAPTP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGMPPGASPAIQPQFQFQRPPQPSAPSDAAPPVGPRGTDVLPNQPLTAPPADISAPPNSN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSAITAAVAVAVVTLAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQVGMTR
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCH
DQVRTLLGTPLLTDMFHADRWDYLFYFKRGSTSVVQQRDLVLHFQNDRLASWSGAENLPT
HHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCC
ELDLLADIDGDRRGKRAAKAAAKAAAEQAAAASAASAAAAAAPAPAAAAPAPSLPPDMAA
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SPAAGASSASSAAAPAAGGQSAANTEAARAANRATAQVPGQGAQHRFKPSAQSAPSAPTP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGMPPGASPAIQPQFQFQRPPQPSAPSDAAPPVGPRGTDVLPNQPLTAPPADISAPPNSN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]