| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is secA [H]
Identifier: 238026141
GI number: 238026141
Start: 497972
End: 500761
Strand: Direct
Name: secA [H]
Synonym: bglu_1g04710
Alternate gene names: 238026141
Gene position: 497972-500761 (Clockwise)
Preceding gene: 238026139
Following gene: 238026142
Centisome position: 12.75
GC content: 66.02
Gene sequence:
>2790_bases ATGACAACCGGTTTTCTCCAGAAAATTTTTGGCAGCCGCAATCAGCGGCTCGTCAAGCAATACCAAAAGACCGTCGCGGC GATCAATGCGCTCGAGCCGCAGATCGAGCAGTTGACGGACGACCAGCTGCGCGGCAAGACCGGTGAATTCCGCCAGCGCG TCGCGGCCGGCGAGTCGCTCGACACGCTGCTGCCCGAGGCGTTCGCGGTCTGTCGCGAGGCCAGCCGGCGCGTGCTGAAG ATGCGTCATTTCGATACGCAGCTGATCGGGGGCATGGTGCTGCATTACGGCAAGATCGCCGAAATGCGCACCGGCGAGGG CAAGACGCTGGTCGCGACGCTGGCCGCCTACCTGAACGCGCTGTCGGGCCGCGGCGTTCACGTCGTGACCGTCAATGACT ACCTCGCGCAGCGCGACGCCGAGTGGATGGGGCGCCTCTACAACTTCCTCGGGCTGTCGGTCGGCATCAACCTGTCCGGC ATGGAGCACGAGCAGAAGCACGAGGCCTATGCCGCCGACATCACCTACGGCACCAACAACGAATTCGGCTTCGACTACCT GCGCGACAATATGGTCTACGAGACGGAGGCACGCGTCCAGCGCGCGCTGAACTTCTCGATCGTCGACGAAGTGGATTCGA TCCTGATCGACGAGGCGCGCACGCCGCTCATCATCTCGGGTCAGGCCGAGGACCACACCGAGCTGTACGTGCGCATGAAC GCGTTGCCGCCGCTGCTCGAGCGCCAGATCGGCGAGGAAAAGGCCGATGGCACCGGCGTCGAGAAGCCGGGCGACTACAC GCTCGACGAGAAGGCGCGCCAGGTGTTTCTGACCGAATCGGGCCACGAGAAGGCCGAGCGGCTGCTCGCCGAGTGGGGCC TGATCGGTGAGGGCGAGAGCCTCTACGCGCCGCAGAACATCACGCTGATGCACCACGTGTATGCGGCGCTGCGCGCCCAC ACGCTGTTCCATCGCGACCAGCACTACGTGGTGCAGAACGGCGAGGTGGTGATCGTCGACGAGTTCACGGGCCGCCTGAT GGCGGGCCGGCGCTGGTCCGACGGCCTGCACCAGGCGGTCGAGGCGAAGGAGCACGTGAAGATCCAGAGCGAGAACCAGA CGCTTGCCTCGATCACGTTCCAGAACTACTTCCGGATGTATGCGAAGCTGTCGGGCATGACGGGGACGGCCGACACCGAG GCCTACGAATTCAACGAGATCTACGGCCTCGAGACGGTCGTGATCCCGACCAACCGTCCGCCCAAGCGCATCGACAAGCA GGACCAGATCTACAAGAGCGCGAAGGAGCGCTACGATGCGGTGATCCGCGACATCCGCGACTGCTACGAGCGCGGCCAGC CGGTGCTGGTCGGCACCACCTCGATCGAGAACTCGGAGTTGCTCTCGCACCTGCTCAAGCAGGCCGGGCTGCCGCACGAG GTGCTGAACGCCAAGCAGCACGCGCGCGAAGCCGCGATCGTGGCCGAGGCGGGGCGTCCGAAGCGGATCACGATCGCGAC CAACATGGCGGGCCGCGGCACCGACATCGTGCTCGGCGGCAACGTCGAGAAGCAGGCTTCGTTCATCGAGGCCGACGACG CGATCCCGGCCGAGGAAAAGGTCGCGCGCATCCAGCAGCTGCACGACGAGTGGGAAACGCTGCACCAGCAGGTGAAGGCC GCGGGCGGCCTGCACATCATCGGCACCGAGCGCCACGAATCGCGCCGTATCGACAACCAGCTGCGCGGCCGTGCGGGCCG CCAGGGCGATCCGGGTTCGTCGCGCTTCTACCTCTCGCTCGACGATCCGCTGCTGCGCATCTTCGCCGGCGACCGCGTGC GCGCGATCATGGACCGCCTGAAGATGCCGGAGGGCGAGGCGATCGAGGCGGGCATCGTGACGCGTTCGATCGAGTCGGCA CAGCGCAAGGTCGAGGCCCGCAACTTCGACATCCGCAAGCAGCTGCTCGAATACGACGACGTGTCGAACGACCAGCGCAA GGTGATTTACCAGCAGCGCAACGAACTGCTCGAGGCGCACGACATCGCCGAGACCATCGGCGCGATGCGCCACGGCGTGA TCACGGAGATCGTCCACCAGTACGTGCCGCCGGGCAGCATCGAGGAGCAATGGGACCTACCCGAGCTCGAGGAAGCGCTG CGCAGCGACTGGGGCCTCGATCTCGCGATTCAGGAAATGGTCAACGAATCGCAGTCGATCAGCGTCGACGAAATCCTCGA AGCGGTGACGACGGCCGCCGACGAGCACTACGAGGCGAAGGTCGCGCTGGTCGGTCGCGAGGCGTTCAGCTCGTTCGAGC GCTCGATCATGCTGCAGACGCTGGACCGCCTCTGGCGCGAGCATCTGGCCGCGCTGGACCACCTGCGCCAGGGCATCCAT CTGCGCGGCTACGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGGCGTTCGAGCTGTTCGCGGCGATGCTCGAGGC GATCAAGCAGGAAGTCACGCGGATCGTCATGAACGTGCAGATCCAGTCGCCGGAGCAGCTCGAGGAGGCGGCCGAGCAGA TCGAGGAATCGGGCGGCCAACTGGTCGAGCACGTCGAGTTCCGCCATGCCGATTTCTCCGAGACCGGCGCCGCAGTGGCG ACGGTGGCTGCCGCCGAGATGGTCGACGGCGCGATGGCGGCGCGTGCGGGCGGCGAGCCGGCGGGCGAGGTGCCGCGCGT CGGGCGCAACGACCCGTGCCCGTGCGGCAGCGGCAAGAAGTACAAGCACTGCCACGGCAAGCTGAGCTGA
Upstream 100 bases:
>100_bases TCCTCGTTTGAATTCACTCATACGCTAAGCCGCCAAGGCTCGGCGCGCCGGGGTAGGCGTCATCCGCTCCGGGGCCGTTG CTGCGACGCAGACCCGATCG
Downstream 100 bases:
>100_bases CCCCGGCGGCGGCGCGCGGGGCGGCGTGCGATCCACCTGCCCGGCGCCGTCTTCGTGGCCCGGCGCCATGCCCCTGTCGC ACATTCGAGCGCAGCATGAC
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 929; Mature: 928
Protein sequence:
>929_residues MTTGFLQKIFGSRNQRLVKQYQKTVAAINALEPQIEQLTDDQLRGKTGEFRQRVAAGESLDTLLPEAFAVCREASRRVLK MRHFDTQLIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNALSGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSG MEHEQKHEAYAADITYGTNNEFGFDYLRDNMVYETEARVQRALNFSIVDEVDSILIDEARTPLIISGQAEDHTELYVRMN ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGESLYAPQNITLMHHVYAALRAH TLFHRDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTE AYEFNEIYGLETVVIPTNRPPKRIDKQDQIYKSAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE VLNAKQHAREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNVEKQASFIEADDAIPAEEKVARIQQLHDEWETLHQQVKA AGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESA QRKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVITEIVHQYVPPGSIEEQWDLPELEEAL RSDWGLDLAIQEMVNESQSISVDEILEAVTTAADEHYEAKVALVGREAFSSFERSIMLQTLDRLWREHLAALDHLRQGIH LRGYAQKNPKQEYKREAFELFAAMLEAIKQEVTRIVMNVQIQSPEQLEEAAEQIEESGGQLVEHVEFRHADFSETGAAVA TVAAAEMVDGAMAARAGGEPAGEVPRVGRNDPCPCGSGKKYKHCHGKLS
Sequences:
>Translated_929_residues MTTGFLQKIFGSRNQRLVKQYQKTVAAINALEPQIEQLTDDQLRGKTGEFRQRVAAGESLDTLLPEAFAVCREASRRVLK MRHFDTQLIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNALSGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSG MEHEQKHEAYAADITYGTNNEFGFDYLRDNMVYETEARVQRALNFSIVDEVDSILIDEARTPLIISGQAEDHTELYVRMN ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGESLYAPQNITLMHHVYAALRAH TLFHRDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTE AYEFNEIYGLETVVIPTNRPPKRIDKQDQIYKSAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE VLNAKQHAREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNVEKQASFIEADDAIPAEEKVARIQQLHDEWETLHQQVKA AGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESA QRKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVITEIVHQYVPPGSIEEQWDLPELEEAL RSDWGLDLAIQEMVNESQSISVDEILEAVTTAADEHYEAKVALVGREAFSSFERSIMLQTLDRLWREHLAALDHLRQGIH LRGYAQKNPKQEYKREAFELFAAMLEAIKQEVTRIVMNVQIQSPEQLEEAAEQIEESGGQLVEHVEFRHADFSETGAAVA TVAAAEMVDGAMAARAGGEPAGEVPRVGRNDPCPCGSGKKYKHCHGKLS >Mature_928_residues TTGFLQKIFGSRNQRLVKQYQKTVAAINALEPQIEQLTDDQLRGKTGEFRQRVAAGESLDTLLPEAFAVCREASRRVLKM RHFDTQLIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNALSGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSGM EHEQKHEAYAADITYGTNNEFGFDYLRDNMVYETEARVQRALNFSIVDEVDSILIDEARTPLIISGQAEDHTELYVRMNA LPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGESLYAPQNITLMHHVYAALRAHT LFHRDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTEA YEFNEIYGLETVVIPTNRPPKRIDKQDQIYKSAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHEV LNAKQHAREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNVEKQASFIEADDAIPAEEKVARIQQLHDEWETLHQQVKAA GGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESAQ RKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVITEIVHQYVPPGSIEEQWDLPELEEALR SDWGLDLAIQEMVNESQSISVDEILEAVTTAADEHYEAKVALVGREAFSSFERSIMLQTLDRLWREHLAALDHLRQGIHL RGYAQKNPKQEYKREAFELFAAMLEAIKQEVTRIVMNVQIQSPEQLEEAAEQIEESGGQLVEHVEFRHADFSETGAAVAT VAAAEMVDGAMAARAGGEPAGEVPRVGRNDPCPCGSGKKYKHCHGKLS
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=928, Percent_Identity=59.698275862069, Blast_Score=1103, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 104260; Mature: 104129
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGFLQKIFGSRNQRLVKQYQKTVAAINALEPQIEQLTDDQLRGKTGEFRQRVAAGESL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHCCCCHHHHHHHHCCCHH DTLLPEAFAVCREASRRVLKMRHFDTQLIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LSGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSGMEHEQKHEAYAADITYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECCCC EFGFDYLRDNMVYETEARVQRALNFSIVDEVDSILIDEARTPLIISGQAEDHTELYVRMN CCCHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEC ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGES CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCCC LYAPQNITLMHHVYAALRAHTLFHRDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAV EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHCCCCCHHHHHHHH EAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTEAYEFNEIYGLETVVIPTNRP HHHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCCEEEEECCCCC PKRIDKQDQIYKSAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHH VLNAKQHAREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNVEKQASFIEADDAIPAEEK HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHH VARIQQLHDEWETLHQQVKAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE DDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDD CCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC VSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVITEIVHQYVPPGSIEEQWDLPELEEAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RSDWGLDLAIQEMVNESQSISVDEILEAVTTAADEHYEAKVALVGREAFSSFERSIMLQT HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECHHHHHHHHHHHHHHH LDRLWREHLAALDHLRQGIHLRGYAQKNPKQEYKREAFELFAAMLEAIKQEVTRIVMNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IQSPEQLEEAAEQIEESGGQLVEHVEFRHADFSETGAAVATVAAAEMVDGAMAARAGGEP CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCC AGEVPRVGRNDPCPCGSGKKYKHCHGKLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTGFLQKIFGSRNQRLVKQYQKTVAAINALEPQIEQLTDDQLRGKTGEFRQRVAAGESL CHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHCCCCHHHHHHHHCCCHH DTLLPEAFAVCREASRRVLKMRHFDTQLIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LSGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSGMEHEQKHEAYAADITYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECCCC EFGFDYLRDNMVYETEARVQRALNFSIVDEVDSILIDEARTPLIISGQAEDHTELYVRMN CCCHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEC ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGES CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCCC LYAPQNITLMHHVYAALRAHTLFHRDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAV EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHCCCCCHHHHHHHH EAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTEAYEFNEIYGLETVVIPTNRP HHHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCCEEEEECCCCC PKRIDKQDQIYKSAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHH VLNAKQHAREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNVEKQASFIEADDAIPAEEK HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHH VARIQQLHDEWETLHQQVKAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE DDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDD CCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC VSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVITEIVHQYVPPGSIEEQWDLPELEEAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RSDWGLDLAIQEMVNESQSISVDEILEAVTTAADEHYEAKVALVGREAFSSFERSIMLQT HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECHHHHHHHHHHHHHHH LDRLWREHLAALDHLRQGIHLRGYAQKNPKQEYKREAFELFAAMLEAIKQEVTRIVMNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IQSPEQLEEAAEQIEESGGQLVEHVEFRHADFSETGAAVATVAAAEMVDGAMAARAGGEP CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCC AGEVPRVGRNDPCPCGSGKKYKHCHGKLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA